Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022467 Daucus carota HOM05D006275 ORTHO05D007839 7.8e-73 276.9 131 100.0
HanXRQChr09g0268981 Helianthus annuus HOM05D006275 ORTHO05D007839 3.9e-48 194.9 132 72.7
SalBow7G2217 Salvia bowleyana HOM05D006275 ORTHO05D007839 8.6e-48 193.7 131 72.5
Solyc04g080630.4 Solanum lycopersicum HOM05D006275 ORTHO05D007839 5.6e-47 191.0 130 71.5
Nitab4.5_0003265g0060 Nicotiana tabacum HOM05D006275 ORTHO05D007839 2.1e-46 189.1 130 70.8
Nitab4.5_0009228g0020 Nicotiana tabacum HOM05D006275 ORTHO05D007839 2.1e-46 189.1 130 70.8
PGSC0003DMG400003696 Solanum tuberosum HOM05D006275 ORTHO05D007839 2.8e-46 188.7 130 70.8
Lsat_1_v5_gn_4_117720 Lactuca sativa HOM05D006275 ORTHO05D007839 8.1e-46 187.2 130 69.2
GSVIVG01009748001 Vitis vinifera HOM05D006275 ORTHO05D007839 1.8e-45 186.0 131 68.7
Ah.05g177020 Amaranthus hybridus HOM05D006275 ORTHO05D007839 3.1e-45 185.3 133 67.7
CSS0002686 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 4.0e-45 184.9 134 66.4
CSS0030866 Camellia sinensis var. sinensis HOM05D000817 ORTHO05D000702 4.0e-45 184.9 134 66.4
Migut.J00614 Erythranthe guttata HOM05D006275 ORTHO05D007839 4.0e-45 184.9 131 67.9
Sc02g0005820 Simmondsia chinensis HOM05D006275 ORTHO05D007839 6.8e-45 184.1 131 68.7
Dinv39443 Davidia involucrata HOM05D006275 ORTHO05D007839 3.4e-44 181.8 130 68.5
ECA232G2653 Erigeron canadensis HOM05D006275 ORTHO05D007839 5.8e-44 181.0 131 65.6
Oeu002824.1 Olea europaea HOM05D006275 ORTHO05D007839 5.8e-44 181.0 131 67.2
Oeu047769.1 Olea europaea HOM05D006275 ORTHO05D007839 2.2e-43 179.1 131 67.2
MSTRG.1264 Avicennia marina HOM05D006275 ORTHO05D007839 3.8e-43 178.3 131 67.9
AUR62038041 Chenopodium quinoa HOM05D006275 ORTHO05D007839 8.4e-43 177.2 132 65.9
Peaxi162Scf00140g10025 Petunia axillaris HOM05D006275 ORTHO05D007839 8.4e-43 177.2 130 64.6
FAN15G2697 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.4e-42 175.6 131 64.9
FAN27G1059 Fragaria x ananassa HOM05D006275 ORTHO05D007839 2.4e-42 175.6 131 64.9
EL10Ac1g00643 Beta vulgaris HOM05D006275 ORTHO05D007839 3.2e-42 175.3 133 63.2
Gohir.D05G195400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 3.2e-42 175.3 130 68.5
Gohir.A05G192200 Gossypium hirsutum HOM05D006275 ORTHO05D007839 4.2e-42 174.9 130 67.7
CANSAT56G0974 Cannabis sativa HOM05D006275 ORTHO05D007839 5.4e-42 174.5 130 68.5
Sopen04g034220 Solanum pennellii HOM05D006275 ORTHO05D007839 7.1e-42 174.1 97 81.4
SGA_v2.0_scaffold201G41391 Striga asiatica HOM05D006275 ORTHO05D007839 7.1e-42 174.1 131 65.6
unitig_46.g17937 Utricularia gibba HOM05D006275 ORTHO05D007839 7.1e-42 174.1 130 64.6
AUR62014497 Chenopodium quinoa HOM05D006275 ORTHO05D007839 9.3e-42 173.7 133 64.7
HanXRQChr16g0501501 Helianthus annuus HOM05D006275 ORTHO05D007839 9.3e-42 173.7 128 66.4
Migut.N00484 Erythranthe guttata HOM05D006275 ORTHO05D007839 1.2e-41 173.3 130 63.1
Gorai.009G200300 Gossypium raimondii HOM05D006275 ORTHO05D007839 1.6e-41 172.9 130 66.2
CsaV3_3G045380 Cucumis sativus L. HOM05D006275 ORTHO05D007839 2.1e-41 172.6 132 65.2
FvH4_2g39490 Fragaria vesca HOM05D006275 ORTHO05D007839 2.1e-41 172.6 136 62.5
Cc09_g08950 Coffea canephora HOM05D006275 ORTHO05D007839 3.5e-41 171.8 126 66.7
ClCG05G018790 Citrullus lanatus HOM05D006275 ORTHO05D007839 4.6e-41 171.4 132 65.2
A07p40910 Brassica napus HOM05D006275 ORTHO05D007839 6.0e-41 171.0 143 59.4
BraA07t31631Z Brassica rapa HOM05D006275 ORTHO05D007839 6.0e-41 171.0 143 59.4
RcHm_v2.0_Chr6g0301461 Rosa chinensis HOM05D006275 ORTHO05D007839 6.0e-41 171.0 131 62.6
A05p02860 Brassica napus HOM05D006275 ORTHO05D007839 7.8e-41 170.6 142 61.3
BraA05t19277Z Brassica rapa HOM05D006275 ORTHO05D007839 7.8e-41 170.6 142 61.3
Cpa.g.c33902 Carica papaya HOM05D006275 ORTHO05D007839 7.8e-41 170.6 129 63.6
BcaC08g47007 Brassica carinata HOM05D006275 ORTHO05D007839 1.0e-40 170.2 147 57.8
Nn1g04018 Nelumbo nucifera HOM05D006275 ORTHO05D007839 1.0e-40 170.2 131 64.9
C04p03490 Brassica napus HOM05D006275 ORTHO05D007839 1.3e-40 169.9 142 60.6
MELO3C003811.2 Cucumis melo HOM05D006275 ORTHO05D007839 1.7e-40 169.5 132 64.4
TAR628G1199 Trochodendron aralioides HOM05D006275 ORTHO05D007839 3.9e-40 168.3 133 64.7
BcaC08g47361 Brassica carinata HOM05D006275 ORTHO05D007839 6.6e-40 167.5 143 59.4
C06p49340 Brassica napus HOM05D006275 ORTHO05D007839 6.6e-40 167.5 143 59.4
BolC6t39969H Brassica oleracea HOM05D006275 ORTHO05D007839 6.6e-40 167.5 143 59.4
Duzib093G0437 Durio zibethinus HOM05D006275 ORTHO05D007839 6.6e-40 167.5 134 62.7
Thhalv10019294m.g Eutrema salsugineum HOM05D006275 ORTHO05D007839 6.6e-40 167.5 147 57.1
BcaC02g12477 Brassica carinata HOM05D006275 ORTHO05D007839 8.7e-40 167.2 142 59.9
BolC4t21983H Brassica oleracea HOM05D006275 ORTHO05D007839 8.7e-40 167.2 142 59.9
Thecc.08G031000 Theobroma cacao HOM05D006275 ORTHO05D007839 8.7e-40 167.2 130 66.2
Atru.chr13.432 Acer truncatum HOM05D006275 ORTHO05D007839 1.5e-39 166.4 116 67.2
COL.COLO4_26271 Corchorus olitorius HOM05D006275 ORTHO05D007839 1.5e-39 166.4 132 63.6
CSS0039262 Camellia sinensis var. sinensis HOM05D006275 ORTHO05D007839 1.9e-39 166.0 131 63.4
Eucgr.F01878 Eucalyptus grandis HOM05D006275 ORTHO05D007839 2.5e-39 165.6 129 61.2
Potri.002G033300 Populus trichocarpa HOM05D006275 ORTHO05D007839 2.5e-39 165.6 133 62.4
Sed0006872 Sechium edule HOM05D006275 ORTHO05D007839 2.5e-39 165.6 130 62.3
THA.LOC104811376 Tarenaya hassleriana HOM05D006275 ORTHO05D007839 2.5e-39 165.6 141 59.6
AL2G35280 Arabidopsis lyrata HOM05D006275 ORTHO05D007839 3.3e-39 165.2 145 57.9
PGR031G1371 Punica granatum HOM05D006275 ORTHO05D007839 4.3e-39 164.9 130 62.3
AT1G75350 Arabidopsis thaliana HOM05D006275 ORTHO05D007839 9.6e-39 163.7 144 58.3
Carub.0002s2219 Capsella rubella HOM05D006275 ORTHO05D007839 9.6e-39 163.7 148 56.8
Manes.05G156800 Manihot esculenta HOM05D006275 ORTHO05D007839 9.6e-39 163.7 130 62.3
Prupe.1G376100 Prunus persica HOM05D006275 ORTHO05D007839 9.6e-39 163.7 137 62.0
CiPaw.07G158800 Carya illinoinensis HOM05D006275 ORTHO05D007839 4.8e-38 161.4 126 62.7
CARHR068700 Cardamine hirsuta HOM05D006275 ORTHO05D007839 6.2e-38 161.0 144 56.9
ATR0568G031 Amborella trichopoda HOM05D006275 ORTHO05D007839 8.1e-38 160.6 130 61.5
PSO764G0160 Papaver somniferum HOM05D006275 ORTHO05D007839 1.1e-37 160.2 137 57.7
TWI36G0893 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 1.1e-37 160.2 132 62.1
Cfa013858 Carpinus fangiana HOM05D006275 ORTHO05D007839 1.4e-37 159.8 102 69.6
PSO731G0021 Papaver somniferum HOM05D006275 ORTHO05D007839 1.4e-37 159.8 137 58.4
Lalb_Chr22g0354641 Lupinus albus HOM05D006275 ORTHO05D007839 2.4e-37 159.1 130 61.5
MD15G1023800 Malus domestica HOM05D006275 ORTHO05D007839 2.4e-37 159.1 135 60.0
Ciclev10002669m.g Citrus clementina HOM05D006275 ORTHO05D007839 3.1e-37 158.7 134 59.7
Sp5g30490 Schrenkiella parvula HOM05D006275 ORTHO05D007839 3.1e-37 158.7 146 56.2
Ca_18049_v3 Cicer arietinum L. HOM05D006275 ORTHO05D007839 6.9e-37 157.5 134 59.0
Aa31LG4G5560 Aethionema arabicum HOM05D006275 ORTHO05D007839 1.2e-36 156.8 143 58.0
arahy.Tifrunner.gnm1.ann1.RSD13X Arachis hypogaea HOM05D006275 ORTHO05D007839 1.2e-36 156.8 129 59.7
arahy.Tifrunner.gnm1.ann1.T5GRUU Arachis hypogaea HOM05D006275 ORTHO05D007839 1.2e-36 156.8 129 59.7
VMungo0647G0412 Vigna mungo HOM05D006275 ORTHO05D007839 1.5e-36 156.4 134 58.2
Phvul.001G012400 Phaseolus vulgaris HOM05D006275 ORTHO05D007839 2.0e-36 156.0 129 61.2
Sabra02G0026900 Salix brachista HOM05D006275 ORTHO05D007839 2.6e-36 155.6 95 73.7
Actinidia37997 Actinidia chinensis HOM05D006275 ORTHO05D007839 3.4e-36 155.2 123 60.2
Haze_22533 Corylus avellana HOM05D006275 ORTHO05D007839 3.4e-36 155.2 96 71.9
arahy.Tifrunner.gnm1.ann1.W9L06J Arachis hypogaea HOM05D006275 ORTHO05D007839 5.8e-36 154.5 129 59.7
arahy.Tifrunner.gnm1.ann1.WR55YC Arachis hypogaea HOM05D006275 ORTHO05D007839 5.8e-36 154.5 129 59.7
MD08G1027600 Malus domestica HOM05D006275 ORTHO05D007839 1.3e-35 153.3 135 57.8
Aqoxy5G01584 Aquilegia oxysepala HOM05D006275 ORTHO05D007839 2.2e-35 152.5 136 58.1
Medtr1g022450 Medicago truncatula HOM05D006275 ORTHO05D007839 2.2e-35 152.5 134 58.2
Lj5g0023115 Lotus japonicus HOM05D006275 ORTHO05D007839 1.4e-34 149.8 136 57.4
HPP92_009679 Vanilla planifolia HOM05D006275 ORTHO05D007839 1.9e-34 149.4 106 60.4
CDE02G2235 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 2.4e-34 149.1 98 70.4
CDE06G0798 Ceratophyllum demersum HOM05D006275 ORTHO05D007839 3.2e-34 148.7 98 70.4
Glyma.17G252600 Glycine max HOM05D006275 ORTHO05D007839 4.2e-34 148.3 93 69.9
Glyma.14G072400 Glycine max HOM05D006275 ORTHO05D007839 5.4e-34 147.9 93 68.8
FAN20G1429 Fragaria x ananassa HOM05D006275 ORTHO05D007839 1.6e-33 146.4 105 66.7
Rhsim07G0241500 Rhododendron simsii HOM05D006275 ORTHO05D007839 1.6e-33 146.4 141 55.3
RhsimUnG0236400 Rhododendron simsii HOM05D006275 ORTHO05D007839 1.6e-33 146.4 141 55.3
Psat6g009240 Pisum sativum HOM05D006275 ORTHO05D007839 4.6e-33 144.8 130 54.6
Pp3c4_22510 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.7e-32 142.9 97 64.9
TPR.G20152 Trifolium pratense HOM05D006275 ORTHO05D007839 1.9e-31 139.4 91 68.1
Pp3c3_430 Physcomitrium patens HOM05D006275 ORTHO05D007839 1.3e-30 136.7 97 62.9
Pp3c13_7030 Physcomitrium patens HOM05D006275 ORTHO05D007839 2.8e-30 135.6 95 60.0
Mapoly0051s0056 Marchantia polymorpha HOM05D006275 ORTHO05D007839 1.1e-29 133.7 98 62.2
vmacro04538 Vaccinium macrocarpon HOM05D006275 ORTHO05D007839 1.1e-29 133.7 84 66.7
AagrBONN_evm.TU.Sc2ySwM_368.2624 Anthoceros agrestis HOM05D006275 ORTHO05D007839 2.4e-29 132.5 98 61.2
CBR_g52135 Chara braunii HOM05D006275 ORTHO05D007839 5.8e-28 127.9 98 61.2
SMO117G0016 Selaginella moellendorffii HOM05D006275 ORTHO05D007839 3.2e-26 122.1 97 55.7
SEGI_04934 Sequoiadendron giganteum HOM05D006275 ORTHO05D007839 2.5e-23 112.5 95 52.6
Os01g0633000 Oryza sativa ssp. japonica HOM05D006275 ORTHO05D007839 7.4e-23 110.9 104 53.8
Zm00001eb159080 Zea mays HOM05D006275 ORTHO05D007839 1.6e-22 109.8 103 52.4
QL02p009087 Quercus lobata HOM05D006275 ORTHO05D007839 4.8e-22 108.2 71 70.4
Duzib041G0262 Durio zibethinus HOM05D006275 ORTHO05D007839 3.1e-21 105.5 70 71.4
Cre08.g365400 Chlamydomonas reinhardtii HOM05D006275 ORTHO05D007839 1.5e-20 103.2 89 49.4
BcaC09g48250 Brassica carinata HOM05D006275 ORTHO05D007839 3.2e-18 95.5 59 66.1
MCO12G376 Micromonas commoda HOM05D006275 ORTHO05D007839 1.1e-15 87.0 91 41.8
Gohir.D12G058400 Gossypium hirsutum HOM05D006275 ORTHO05D007839 3.3e-15 85.5 74 58.1
Gorai.010G176600 Gossypium raimondii HOM05D006275 ORTHO05D007839 2.8e-14 82.4 75 58.7
TWI56G0783 Tripterygium wilfordii HOM05D006275 ORTHO05D007839 6.3e-14 81.3 58 69.0
BcaC05g28396 Brassica carinata HOM05D006275 ORTHO05D003437 1.5e-07 60.1 58 56.9
Sabra05G0177600 Salix brachista HOM05D006275 ORTHO05D007839 4.3e-07 58.5 56 50.0


User provided reference genes

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