Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022432 Daucus carota HOM05D006679 ORTHO05D008461 4.8e-51 204.1 98 100.0
DCAR_019453 Daucus carota HOM05D006679 ORTHO05D008461 8.7e-45 183.3 97 91.8
Gohir.A05G202400 Gossypium hirsutum HOM05D006679 ORTHO05D008461 1.8e-34 149.1 90 78.9
Gohir.D05G205500 Gossypium hirsutum HOM05D006679 ORTHO05D008461 1.8e-34 149.1 90 78.9
Gorai.009G211800 Gossypium raimondii HOM05D006679 ORTHO05D008461 1.8e-34 149.1 90 78.9
Lj4A58T19 Lonicera japonica HOM05D006679 ORTHO05D008461 6.9e-34 147.1 91 76.9
GSVIVG01009494001 Vitis vinifera HOM05D006679 ORTHO05D008461 9.1e-34 146.7 90 78.9
Thecc.08G007200 Theobroma cacao HOM05D006679 ORTHO05D008461 1.2e-33 146.4 90 76.7
Potri.014G029200 Populus trichocarpa HOM05D006679 ORTHO05D008461 2.0e-33 145.6 90 77.8
Hma1.2p1_0982F.1_g244020 Hydrangea macrophylla HOM05D006679 ORTHO05D008461 2.6e-33 145.2 91 78.0
COL.COLO4_26510 Corchorus olitorius HOM05D006679 ORTHO05D008461 3.4e-33 144.8 95 72.6
Cpa.g.sc49.20 Carica papaya HOM05D006679 ORTHO05D008461 4.5e-33 144.4 91 75.8
Duzib041G0515 Durio zibethinus HOM05D006679 ORTHO05D008461 4.5e-33 144.4 90 75.6
Sabra14G0020000 Salix brachista HOM05D006679 ORTHO05D008461 4.5e-33 144.4 90 76.7
CANSAT25G3852 Cannabis sativa HOM05D006679 ORTHO05D008461 5.9e-33 144.1 94 73.4
THA.LOC104803677 Tarenaya hassleriana HOM05D006679 ORTHO05D008461 1.3e-32 142.9 90 76.7
Dinv39316 Davidia involucrata HOM05D006679 ORTHO05D008461 1.7e-32 142.5 90 74.4
Oeu017172.1 Olea europaea HOM05D006679 ORTHO05D008461 1.7e-32 142.5 91 73.6
Actinidia22629 Actinidia chinensis HOM05D006679 ORTHO05D008461 3.8e-32 141.4 91 73.6
Cfa018555 Carpinus fangiana HOM05D006679 ORTHO05D008461 6.5e-32 140.6 90 73.3
Lsat_1_v5_gn_4_125640 Lactuca sativa HOM05D006679 ORTHO05D008461 6.5e-32 140.6 97 69.1
TAR376G0298 Trochodendron aralioides HOM05D006679 ORTHO05D008461 6.5e-32 140.6 90 76.7
Atru.chr13.694 Acer truncatum HOM05D006679 ORTHO05D008461 1.1e-31 139.8 96 69.8
CsaV3_2G027800 Cucumis sativus L. HOM05D006679 ORTHO05D008461 1.4e-31 139.4 94 69.1
Sc15g0006140 Simmondsia chinensis HOM05D006679 ORTHO05D008461 1.4e-31 139.4 90 74.4
Sc15g0006210 Simmondsia chinensis HOM05D006679 ORTHO05D008461 1.4e-31 139.4 90 74.4
Eucgr.F00226 Eucalyptus grandis HOM05D006679 ORTHO05D008461 1.9e-31 139.0 89 74.2
Nn1g04857 Nelumbo nucifera HOM05D006679 ORTHO05D008461 1.9e-31 139.0 90 73.3
SalBow7G0072 Salvia bowleyana HOM05D006679 ORTHO05D008461 1.9e-31 139.0 99 68.7
Ciclev10002686m.g Citrus clementina HOM05D006679 ORTHO05D008461 3.2e-31 138.3 88 75.0
ECA232G3126 Erigeron canadensis HOM05D006679 ORTHO05D008461 3.2e-31 138.3 97 69.1
Haze_17524 Corylus avellana HOM05D006679 ORTHO05D008461 4.2e-31 137.9 90 71.1
AL1G17900 Arabidopsis lyrata HOM05D006679 ORTHO05D008461 7.2e-31 137.1 90 72.2
Manes.05G174002 Manihot esculenta HOM05D006679 ORTHO05D008461 7.2e-31 137.1 94 69.1
PGR083G0721 Punica granatum HOM05D006679 ORTHO05D008461 9.4e-31 136.7 87 73.6
Sed0001224 Sechium edule HOM05D006679 ORTHO05D008461 9.4e-31 136.7 95 67.4
Prupe.1G435400 Prunus persica HOM05D006679 ORTHO05D008461 1.2e-30 136.3 90 72.2
TWI56G1133 Tripterygium wilfordii HOM05D006679 ORTHO05D008461 1.2e-30 136.3 89 74.2
Rhsim06G0049900 Rhododendron simsii HOM05D006679 ORTHO05D008461 2.1e-30 135.6 91 71.4
Aqoxy6G01320 Aquilegia oxysepala HOM05D006679 ORTHO05D008461 2.7e-30 135.2 92 70.7
HanXRQChr14g0439631 Helianthus annuus HOM05D006679 ORTHO05D008461 2.7e-30 135.2 94 67.0
AT1G07700 Arabidopsis thaliana HOM05D006679 ORTHO05D008461 3.6e-30 134.8 90 71.1
CAN.G371.2 Capsicum annuum HOM05D006679 ORTHO05D008461 3.6e-30 134.8 91 72.5
Cc10_g04150 Coffea canephora HOM05D006679 ORTHO05D008461 3.6e-30 134.8 93 67.7
Nitab4.5_0000287g0350 Nicotiana tabacum HOM05D006679 ORTHO05D008461 3.6e-30 134.8 91 72.5
Nitab4.5_0003118g0010 Nicotiana tabacum HOM05D006679 ORTHO05D008461 3.6e-30 134.8 91 72.5
Peaxi162Scf00252g00067 Petunia axillaris HOM05D006679 ORTHO05D008461 4.7e-30 134.4 91 70.3
QL02p004799 Quercus lobata HOM05D006679 ORTHO05D008461 4.7e-30 134.4 90 71.1
PGSC0003DMG400008013 Solanum tuberosum HOM05D006679 ORTHO05D008461 6.1e-30 134.0 91 71.4
Aa31LG5G9280 Aethionema arabicum HOM05D006679 ORTHO05D008461 1.0e-29 133.3 92 71.7
MSTRG.1349 Avicennia marina HOM05D006679 ORTHO05D008461 1.0e-29 133.3 93 69.9
Solyc04g078910.3 Solanum lycopersicum HOM05D006679 ORTHO05D008461 1.0e-29 133.3 96 67.7
CDE04G2190 Ceratophyllum demersum HOM05D006679 ORTHO05D008461 1.4e-29 132.9 95 69.5
CSS0029638 Camellia sinensis var. sinensis HOM05D006679 ORTHO05D008461 1.8e-29 132.5 91 69.2
CSS0035367 Camellia sinensis var. sinensis HOM05D006679 ORTHO05D008461 1.8e-29 132.5 91 69.2
SGA_v2.0_scaffold616G53207 Striga asiatica HOM05D006679 ORTHO05D008461 1.8e-29 132.5 91 68.1
HPP92_013116 Vanilla planifolia HOM05D006679 ORTHO05D008461 1.8e-29 132.5 95 65.3
Sopen04g032510 Solanum pennellii HOM05D006679 ORTHO05D008461 2.3e-29 132.1 96 67.7
Ah.11g040620 Amaranthus hybridus HOM05D006679 ORTHO05D008461 3.0e-29 131.7 95 68.4
FAN15G2074 Fragaria x ananassa HOM05D006679 ORTHO05D008461 3.0e-29 131.7 93 68.8
FAN20G3165 Fragaria x ananassa HOM05D006679 ORTHO05D008461 3.0e-29 131.7 93 68.8
FAN27G1719 Fragaria x ananassa HOM05D006679 ORTHO05D008461 3.0e-29 131.7 93 68.8
Glyma.04G038900 Glycine max HOM05D006679 ORTHO05D008461 3.0e-29 131.7 91 70.3
Glyma.06G039900 Glycine max HOM05D006679 ORTHO05D008461 3.0e-29 131.7 91 70.3
FvH4_2g34430 Fragaria vesca HOM05D006679 ORTHO05D008461 3.9e-29 131.3 93 68.8
FAN24G0165 Fragaria x ananassa HOM05D006679 ORTHO05D008461 3.9e-29 131.3 93 68.8
Ca_15948_v3 Cicer arietinum L. HOM05D006679 ORTHO05D008461 5.1e-29 131.0 91 69.2
PSO541G1985 Papaver somniferum HOM05D006679 ORTHO05D008461 6.7e-29 130.6 90 67.8
RcHm_v2.0_Chr6g0307941 Rosa chinensis HOM05D006679 ORTHO05D008461 6.7e-29 130.6 90 70.0
Carub.0001s0705 Capsella rubella HOM05D006679 ORTHO05D008461 8.8e-29 130.2 90 67.8
VMungo1309G2322 Vigna mungo HOM05D006679 ORTHO05D008461 8.8e-29 130.2 91 69.2
A03p55310 Brassica napus HOM05D006679 ORTHO05D008461 1.1e-28 129.8 91 70.3
BolC7t45852H Brassica oleracea HOM05D006679 ORTHO05D008461 1.1e-28 129.8 91 70.3
BraA03t14590Z Brassica rapa HOM05D006679 ORTHO05D008461 1.1e-28 129.8 91 70.3
CiPaw.16G043700 Carya illinoinensis HOM05D006679 ORTHO05D008461 1.5e-28 129.4 90 67.8
Thhalv10026224m.g Eutrema salsugineum HOM05D006679 ORTHO05D008461 1.5e-28 129.4 94 66.0
HanXRQChr09g0267601 Helianthus annuus HOM05D006679 ORTHO05D008461 1.5e-28 129.4 87 69.0
MD08G1101500 Malus domestica HOM05D006679 ORTHO05D008461 1.5e-28 129.4 95 66.3
PSO675G1564 Papaver somniferum HOM05D006679 ORTHO05D008461 1.5e-28 129.4 90 66.7
Phvul.009G065200 Phaseolus vulgaris HOM05D006679 ORTHO05D008461 1.5e-28 129.4 91 69.2
ATR1102G028 Amborella trichopoda HOM05D006679 ORTHO05D008461 2.0e-28 129.0 87 73.6
Hund01732 Selenicereus undatus HOM05D006679 ORTHO05D008461 4.4e-28 127.9 99 63.6
SEGI_11121 Sequoiadendron giganteum HOM05D006679 ORTHO05D008461 5.7e-28 127.5 88 68.2
MD15G1082700 Malus domestica HOM05D006679 ORTHO05D008461 1.3e-27 126.3 95 64.2
arahy.Tifrunner.gnm1.ann1.WQ97CK Arachis hypogaea HOM05D006679 ORTHO05D008461 1.7e-27 125.9 89 67.4
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 1.7e-27 125.9 92 68.5
Sp7g22460 Schrenkiella parvula HOM05D006679 ORTHO05D008461 2.2e-27 125.6 91 67.0
vmacro21521 Vaccinium macrocarpon HOM05D006679 ORTHO05D008461 2.2e-27 125.6 91 67.0
CARHR007470 Cardamine hirsuta HOM05D006679 ORTHO05D008461 3.7e-27 124.8 90 63.3
Psat5g043080 Pisum sativum HOM05D006679 ORTHO05D008461 3.7e-27 124.8 91 62.6
EL10Ac1g02036 Beta vulgaris HOM05D006679 ORTHO05D008461 2.4e-26 122.1 83 67.5
Migut.C00578 Erythranthe guttata HOM05D006679 ORTHO05D008461 3.1e-26 121.7 102 57.8
unitig_19.g30011 Utricularia gibba HOM05D006679 ORTHO05D008461 3.1e-26 121.7 93 62.4
unitig_8.g5019 Utricularia gibba HOM05D006679 ORTHO05D008461 3.1e-26 121.7 93 62.4
Lalb_Chr23g0267181 Lupinus albus HOM05D006679 ORTHO05D008461 7.0e-26 120.6 86 65.1
MELO3C010860.2 Cucumis melo HOM05D006679 ORTHO05D008461 1.2e-25 119.8 87 63.2
Medtr3g101740 Medicago truncatula HOM05D006679 ORTHO05D008461 3.5e-25 118.2 96 61.5
Actinidia23275 Actinidia chinensis HOM05D006679 ORTHO05D008461 4.5e-25 117.9 80 67.5
TPR.G24167 Trifolium pratense HOM05D006679 ORTHO05D008461 4.5e-25 117.9 87 63.2
Lj1g0004984 Lotus japonicus HOM05D006679 ORTHO05D008461 3.8e-24 114.8 82 64.6
Os02g0567100 Oryza sativa ssp. japonica HOM05D006679 ORTHO05D008461 8.5e-24 113.6 83 62.7
Zm00001eb244540 Zea mays HOM05D006679 ORTHO05D008461 1.1e-23 113.2 87 59.8
arahy.Tifrunner.gnm1.ann1.XE9EJK Arachis hypogaea HOM05D006679 ORTHO05D008461 1.9e-23 112.5 91 59.3
AUR62036763 Chenopodium quinoa HOM05D006679 ORTHO05D008461 3.2e-23 111.7 77 68.8
Mapoly0014s0177 Marchantia polymorpha HOM05D006679 ORTHO05D008461 1.6e-22 109.4 85 60.0
AagrBONN_evm.TU.Sc2ySwM_344.4629 Anthoceros agrestis HOM05D006679 ORTHO05D008461 2.7e-22 108.6 81 64.2
AUR62013842 Chenopodium quinoa HOM05D006679 ORTHO05D008461 3.0e-21 105.1 74 67.6
Pp3c10_18810 Physcomitrium patens HOM05D006679 ORTHO05D008461 3.0e-21 105.1 88 52.3
Pp3c4_3900 Physcomitrium patens HOM05D006679 ORTHO05D008461 2.6e-20 102.1 94 46.8
BcaC06g32882 Brassica carinata HOM05D006679 ORTHO05D008461 3.3e-20 101.7 91 60.4
AagrBONN_evm.TU.Sc2ySwM_368.1297 Anthoceros agrestis HOM05D006679 ORTHO05D008461 1.0e-13 80.1 93 43.0
RcHm_v2.0_Chr2g0138871 Rosa chinensis HOM05D006679 ORTHO05D008461 5.2e-13 77.8 64 64.1
ClCG08G015940 Citrullus lanatus HOM05D006679 ORTHO05D008461 1.2e-12 76.6 94 44.7
arahy.Tifrunner.gnm1.ann1.Q4KY5Z Arachis hypogaea HOM05D006679 ORTHO05D008461 4.8e-11 71.2 56 58.9
arahy.Tifrunner.gnm1.ann1.FJZ5VR Arachis hypogaea HOM05D006679 ORTHO05D008461 7.2e-07 57.4 91 38.5


User provided reference genes

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