Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022363 Daucus carota HOM05D007065 ORTHO05D008960 5.2e-79 297.7 160 100.0
MD02G1298000 Malus domestica HOM05D007065 ORTHO05D008960 4.9e-29 131.7 160 50.6
PGSC0003DMG400006766 Solanum tuberosum HOM05D007065 ORTHO05D008960 2.1e-27 126.3 176 53.4
Peaxi162Scf01115g00110 Petunia axillaris HOM05D007065 ORTHO05D008960 2.7e-27 125.9 170 53.5
Nitab4.5_0000316g0330 Nicotiana tabacum HOM05D007065 ORTHO05D008960 3.5e-27 125.6 169 53.8
QL04p012215 Quercus lobata HOM05D007065 ORTHO05D008960 3.5e-27 125.6 164 51.2
CiPaw.13G009300 Carya illinoinensis HOM05D007065 ORTHO05D008960 4.6e-27 125.2 173 50.9
Sopen01g035020 Solanum pennellii HOM05D007065 ORTHO05D008960 7.9e-27 124.4 176 52.3
Solyc01g088140.3 Solanum lycopersicum HOM05D007065 ORTHO05D008960 5.1e-26 121.7 176 52.3
Lj3g0026300 Lotus japonicus HOM05D007065 ORTHO05D008960 1.5e-25 120.2 167 52.1
MD07G1026200 Malus domestica HOM05D007065 ORTHO05D008960 1.5e-25 120.2 168 51.2
Dinv05022 Davidia involucrata HOM05D007065 ORTHO05D008960 3.3e-25 119.0 173 49.7
Lalb_Chr04g0263741 Lupinus albus HOM05D007065 ORTHO05D008960 5.6e-25 118.2 170 49.4
Lsat_1_v5_gn_1_99921 Lactuca sativa HOM05D007065 ORTHO05D008960 1.3e-24 117.1 172 47.7
Medtr3g436080 Medicago truncatula HOM05D007065 ORTHO05D008960 1.3e-24 117.1 160 49.4
FvH4_7g02000 Fragaria vesca HOM05D007065 ORTHO05D008960 2.8e-24 115.9 161 51.6
GSVIVG01001464001 Vitis vinifera HOM05D007065 ORTHO05D008960 3.7e-24 115.5 168 50.6
Potri.003G203900 Populus trichocarpa HOM05D007065 ORTHO05D008960 4.8e-24 115.2 176 44.9
Eucgr.G03272 Eucalyptus grandis HOM05D007065 ORTHO05D008960 6.2e-24 114.8 178 46.1
Potri.001G020700 Populus trichocarpa HOM05D007065 ORTHO05D008960 6.2e-24 114.8 170 47.6
Manes.04G064100 Manihot esculenta HOM05D007065 ORTHO05D008960 8.1e-24 114.4 172 46.5
FAN06G0835 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.1e-23 114.0 163 50.3
FAN01G0916 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.4e-23 113.6 161 51.6
Peaxi162Scf01115g00011 Petunia axillaris HOM05D007065 ORTHO05D008960 3.1e-23 112.5 121 57.9
Hund13309 Selenicereus undatus HOM05D007065 ORTHO05D008960 3.1e-23 112.5 117 57.3
CsaV3_5G024860 Cucumis sativus L. HOM05D007065 ORTHO05D008960 5.3e-23 111.7 172 47.1
arahy.Tifrunner.gnm1.ann1.D1ESAM Arachis hypogaea HOM05D007065 ORTHO05D008960 9.0e-23 110.9 157 49.7
MELO3C005114.2 Cucumis melo HOM05D007065 ORTHO05D008960 9.0e-23 110.9 174 47.7
Nn2g15140 Nelumbo nucifera HOM05D007065 ORTHO05D008960 9.0e-23 110.9 162 48.1
Nitab4.5_0016351g0020 Nicotiana tabacum HOM05D007065 ORTHO05D008960 9.0e-23 110.9 104 63.5
Psat5g211000 Pisum sativum HOM05D007065 ORTHO05D008960 9.0e-23 110.9 124 54.0
Actinidia19434 Actinidia chinensis HOM05D007065 ORTHO05D008960 1.2e-22 110.5 170 47.1
EL10Ac2g02888 Beta vulgaris HOM05D007065 ORTHO05D008960 1.2e-22 110.5 169 50.3
MSTRG.20552 Avicennia marina HOM05D007065 ORTHO05D008960 2.0e-22 109.8 189 45.5
arahy.Tifrunner.gnm1.ann1.ZUZF0V Arachis hypogaea HOM05D007065 ORTHO05D008960 3.4e-22 109.0 165 46.1
Sc10g0004180 Simmondsia chinensis HOM05D007065 ORTHO05D008960 5.8e-22 108.2 123 56.1
Cpa.g.sc197.20 Carica papaya HOM05D007065 ORTHO05D008960 7.6e-22 107.8 160 49.4
PGR031G2384 Punica granatum HOM05D007065 ORTHO05D008960 7.6e-22 107.8 177 46.9
AUR62037250 Chenopodium quinoa HOM05D007065 ORTHO05D008960 9.9e-22 107.5 131 51.9
MSTRG.17000 Avicennia marina HOM05D007065 ORTHO05D008960 1.3e-21 107.1 189 44.4
Sabra01G0015300 Salix brachista HOM05D007065 ORTHO05D008960 1.3e-21 107.1 167 47.3
MBI13_g15309_MAGBIO Magnolia biondii HOM05D007065 ORTHO05D008960 1.7e-21 106.7 165 49.1
PSO339G2565 Papaver somniferum HOM05D007065 ORTHO05D008960 2.2e-21 106.3 160 49.4
Aqoxy1G00221 Aquilegia oxysepala HOM05D007065 ORTHO05D008960 3.8e-21 105.5 174 44.8
SGA_v2.0_scaffold4G02459 Striga asiatica HOM05D007065 ORTHO05D008960 3.8e-21 105.5 175 48.0
Phvul.005G034300 Phaseolus vulgaris HOM05D007065 ORTHO05D008960 4.9e-21 105.1 161 49.7
RcHm_v2.0_Chr1g0318991 Rosa chinensis HOM05D007065 ORTHO05D008960 4.9e-21 105.1 162 47.5
Sp6g30550 Schrenkiella parvula HOM05D007065 ORTHO05D008960 4.9e-21 105.1 163 47.9
BolC9t59205H Brassica oleracea HOM05D007065 ORTHO05D008960 6.4e-21 104.8 163 46.6
Cc02_g30050 Coffea canephora HOM05D007065 ORTHO05D008960 6.4e-21 104.8 194 43.8
Sed0022285 Sechium edule HOM05D007065 ORTHO05D008960 6.4e-21 104.8 170 48.8
ClCG01G007790 Citrullus lanatus HOM05D007065 ORTHO05D008960 1.1e-20 104.0 167 46.1
Glyma.11G157140 Glycine max HOM05D007065 ORTHO05D008960 1.1e-20 104.0 155 47.1
Rhsim07G0061200 Rhododendron simsii HOM05D007065 ORTHO05D008960 1.1e-20 104.0 184 45.1
THA.LOC104819111 Tarenaya hassleriana HOM05D007065 ORTHO05D008960 1.1e-20 104.0 159 50.3
AUR62030541 Chenopodium quinoa HOM05D007065 ORTHO05D008960 1.4e-20 103.6 117 52.1
A10p24790 Brassica napus HOM05D007065 ORTHO05D008960 1.9e-20 103.2 163 47.2
PSO384G3763 Papaver somniferum HOM05D007065 ORTHO05D008960 1.9e-20 103.2 160 48.8
Ca_14187_v3 Cicer arietinum L. HOM05D007065 ORTHO05D008960 4.2e-20 102.1 169 45.6
Migut.B01254 Erythranthe guttata HOM05D007065 ORTHO05D008960 1.2e-19 100.5 182 41.8
ATR1134G106 Amborella trichopoda HOM05D007065 ORTHO05D008960 2.1e-19 99.8 179 43.0
BraA10t44543Z Brassica rapa HOM05D007065 ORTHO05D008960 2.7e-19 99.4 164 46.3
Duzib128G1478 Durio zibethinus HOM05D007065 ORTHO05D008960 4.6e-19 98.6 161 44.7
Ah.12g065220 Amaranthus hybridus HOM05D007065 ORTHO05D008960 7.9e-19 97.8 156 44.2
Actinidia06280 Actinidia chinensis HOM05D007065 ORTHO05D008960 1.0e-18 97.4 172 45.9
AT5G13470 Arabidopsis thaliana HOM05D007065 ORTHO05D008960 1.0e-18 97.4 157 44.6
HanXRQChr01g0020971 Helianthus annuus HOM05D007065 ORTHO05D008960 1.0e-18 97.4 167 46.1
Carub.0006s1163 Capsella rubella HOM05D007065 ORTHO05D008960 1.8e-18 96.7 163 45.4
AL6G24090 Arabidopsis lyrata HOM05D007065 ORTHO05D008960 3.0e-18 95.9 160 45.6
CDE07G0125 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 5.1e-18 95.1 166 41.6
Oeu027356.1 Olea europaea HOM05D007065 ORTHO05D008960 1.1e-17 94.0 117 53.0
C02p06180 Brassica napus HOM05D007065 ORTHO05D008960 1.5e-17 93.6 158 44.9
BolC2t06559H Brassica oleracea HOM05D007065 ORTHO05D008960 1.5e-17 93.6 158 44.9
Cfa010837 Carpinus fangiana HOM05D007065 ORTHO05D008960 1.5e-17 93.6 149 49.0
CDE04G3117 Ceratophyllum demersum HOM05D007065 ORTHO05D008960 1.5e-17 93.6 169 40.2
BcaNung01150 Brassica carinata HOM05D007065 ORTHO05D008960 3.3e-17 92.4 158 44.3
Lj9P644T43 Lonicera japonica HOM05D007065 ORTHO05D008960 3.3e-17 92.4 105 60.0
COL.COLO4_19334 Corchorus olitorius HOM05D002616 ORTHO05D003192 4.3e-17 92.0 111 51.4
C09p63610 Brassica napus HOM05D007065 ORTHO05D008960 1.3e-16 90.5 163 44.8
unitig_22.g5430 Utricularia gibba HOM05D007065 ORTHO05D008960 1.3e-16 90.5 179 43.0
ECA248G1453 Erigeron canadensis HOM05D007065 ORTHO05D008960 2.1e-16 89.7 165 43.6
A02p01960 Brassica napus HOM05D007065 ORTHO05D008960 2.8e-16 89.4 152 42.1
BcaNung01886 Brassica carinata HOM05D007065 ORTHO05D002715 6.2e-16 88.2 160 43.8
Duzib114G0680 Durio zibethinus HOM05D007065 ORTHO05D008960 1.1e-15 87.4 164 41.5
FAN28G1096 Fragaria x ananassa HOM05D007065 ORTHO05D008960 1.8e-15 86.7 76 65.8
Aa31LG11G7640 Aethionema arabicum HOM05D007065 ORTHO05D008960 5.3e-15 85.1 168 41.7
BraA02t05169Z Brassica rapa HOM05D007065 ORTHO05D008960 6.9e-15 84.7 152 40.8
HPP92_001654 Vanilla planifolia HOM05D007065 ORTHO05D008960 1.2e-14 84.0 181 41.4
Thecc.10G002700 Theobroma cacao HOM05D007065 ORTHO05D008960 2.0e-14 83.2 161 41.0
Thhalv10014938m.g Eutrema salsugineum HOM05D007065 ORTHO05D008960 2.6e-14 82.8 147 44.9
VMungo1080G1068 Vigna mungo HOM05D007065 ORTHO05D008960 5.8e-14 81.6 103 47.6
FAN03G0341 Fragaria x ananassa HOM05D007065 ORTHO05D008960 7.6e-14 81.3 146 45.2
Gohir.D13G013700 Gossypium hirsutum HOM05D007065 ORTHO05D008960 1.0e-13 80.9 97 51.5
Oeu049459.1 Olea europaea HOM05D007065 ORTHO05D008960 4.9e-13 78.6 105 53.3
vmacro13712 Vaccinium macrocarpon HOM05D007065 ORTHO05D008960 4.9e-13 78.6 152 42.1
TAR636G1654 Trochodendron aralioides HOM05D007065 ORTHO05D008960 6.5e-13 78.2 103 53.4
TPR.G15470 Trifolium pratense HOM05D007065 ORTHO05D008960 1.4e-12 77.0 102 47.1
TWI09G1481 Tripterygium wilfordii HOM05D007065 ORTHO05D008960 1.9e-12 76.6 165 39.4
Hma1.2p1_0579F.1_g182650 Hydrangea macrophylla HOM05D007065 ORTHO05D008960 4.2e-12 75.5 151 40.4
CANSAT80G2361 Cannabis sativa HOM05D007065 ORTHO05D008960 9.3e-12 74.3 67 62.7
Dinv32064 Davidia involucrata HOM05D007065 ORTHO05D008960 2.1e-11 73.2 146 43.2
SalBow5G0133 Salvia bowleyana HOM05D007065 ORTHO05D008960 2.1e-11 73.2 167 40.1
SalBow5G3075 Salvia bowleyana HOM05D007065 ORTHO05D008960 2.1e-11 73.2 164 41.5
Mapoly0014s0118 Marchantia polymorpha HOM05D007065 ORTHO05D008960 3.5e-11 72.4 155 36.1
Thecc.03G067800 Theobroma cacao HOM05D007065 ORTHO05D008960 6.7e-10 68.2 95 46.3
Haze_03101 Corylus avellana HOM05D007065 ORTHO05D008960 5.7e-09 65.1 134 42.5
AagrBONN_evm.TU.Sc2ySwM_228.825 Anthoceros agrestis HOM05D007065 ORTHO05D008960 1.8e-07 60.1 153 35.9
CBR_g4751 Chara braunii HOM05D007065 ORTHO05D008960 2.6e-06 56.2 133 36.1


User provided reference genes

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