Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 7.0e-84 313.9 161 100.0
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 9.0e-39 164.1 160 61.9
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 9.0e-39 164.1 165 60.0
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 2.0e-38 162.9 158 59.5
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.6e-38 162.5 151 57.6
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 5.8e-38 161.4 159 59.7
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.3e-37 160.2 151 57.0
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 1.7e-37 159.8 167 58.1
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 2.2e-37 159.5 159 59.7
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 2.2e-37 159.5 162 55.6
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 2.9e-37 159.1 147 64.6
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 2.9e-37 159.1 149 57.7
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 3.8e-37 158.7 164 56.7
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 3.8e-37 158.7 158 55.7
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 4.9e-37 158.3 164 56.1
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 4.9e-37 158.3 157 55.4
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.5e-37 157.9 151 56.3
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 6.5e-37 157.9 142 59.9
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 8.4e-37 157.5 160 58.1
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.1e-36 157.1 148 60.1
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 1.1e-36 157.1 147 58.5
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.4e-36 156.8 148 57.4
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 2.5e-36 156.0 160 58.8
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 3.2e-36 155.6 154 58.4
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 3.2e-36 155.6 88 83.0
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 7.1e-36 154.5 152 58.6
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 1.2e-35 153.7 185 53.0
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 3.5e-35 152.1 158 57.0
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 3.5e-35 152.1 124 65.3
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 4.6e-35 151.8 129 67.4
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 4.6e-35 151.8 114 71.1
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 4.6e-35 151.8 131 61.8
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 1.8e-34 149.8 155 55.5
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 1.8e-34 149.8 112 69.6
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.3e-34 149.4 166 55.4
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 2.3e-34 149.4 156 55.8
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 5.1e-34 148.3 168 53.0
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 8.7e-34 147.5 156 52.6
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 1.1e-33 147.1 155 58.7
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 1.1e-33 147.1 162 54.9
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 1.1e-33 147.1 164 53.0
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.5e-33 146.7 159 52.8
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 1.9e-33 146.4 147 55.1
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 2.5e-33 146.0 165 52.1
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 2.5e-33 146.0 147 54.4
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 2.5e-33 146.0 150 57.3
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 2.5e-33 146.0 147 55.8
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.5e-33 146.0 158 53.8
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.5e-33 146.0 157 52.2
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 3.3e-33 145.6 163 51.5
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 3.3e-33 145.6 152 53.3
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 3.3e-33 145.6 164 52.4
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 4.3e-33 145.2 153 54.9
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 4.3e-33 145.2 153 54.9
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 4.3e-33 145.2 143 55.2
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 5.7e-33 144.8 146 60.3
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 7.4e-33 144.4 126 59.5
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 9.7e-33 144.1 152 53.3
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.3e-32 143.7 151 58.9
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.3e-32 143.7 157 54.8
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.3e-32 143.7 157 54.8
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 1.3e-32 143.7 164 52.4
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 1.3e-32 143.7 164 53.7
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 1.6e-32 143.3 151 58.9
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 1.6e-32 143.3 151 58.9
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 2.8e-32 142.5 151 58.9
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 2.8e-32 142.5 151 58.9
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 2.8e-32 142.5 126 58.7
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 2.8e-32 142.5 156 55.1
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 2.8e-32 142.5 161 52.8
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 2.8e-32 142.5 162 53.1
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 4.8e-32 141.7 128 62.5
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 8.2e-32 141.0 157 52.2
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 1.1e-31 140.6 152 56.6
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 1.1e-31 140.6 150 56.7
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 1.1e-31 140.6 148 55.4
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 1.1e-31 140.6 131 61.8
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.4e-31 140.2 157 52.2
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 1.4e-31 140.2 155 52.9
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 2.4e-31 139.4 154 56.5
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 4.1e-31 138.7 145 54.5
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 4.1e-31 138.7 144 52.8
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 5.3e-31 138.3 163 49.7
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 5.3e-31 138.3 150 54.0
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 5.3e-31 138.3 153 52.3
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 5.3e-31 138.3 157 52.9
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 6.9e-31 137.9 158 52.5
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 6.9e-31 137.9 157 53.5
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 1.2e-30 137.1 158 51.9
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 1.2e-30 137.1 147 54.4
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.5e-30 136.7 162 51.9
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 1.5e-30 136.7 157 52.9
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.5e-30 136.7 150 50.7
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 2.6e-30 136.0 149 53.0
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.2e-29 132.9 122 59.0
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 8.5e-29 131.0 128 53.1
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 2.5e-28 129.4 155 49.7
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 7.2e-28 127.9 91 62.6
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 1.2e-27 127.1 137 52.6
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 1.2e-27 127.1 90 63.3
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 7.9e-27 124.4 129 55.0
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 7.9e-27 124.4 124 50.8
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 3.0e-26 122.5 163 44.2
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 5.1e-26 121.7 136 51.5
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 5.7e-25 118.2 159 45.9
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 5.7e-25 118.2 71 76.1
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 1.3e-24 117.1 164 44.5
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 2.4e-23 112.8 137 52.6
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 9.4e-20 100.9 68 67.6
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 9.7e-17 90.9 53 81.1
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 4.8e-16 88.6 143 38.5
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 4.8e-16 88.6 110 41.8
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 5.3e-15 85.1 53 73.6
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 1.5e-14 83.6 141 38.3
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 1.7e-13 80.1 96 38.5


User provided reference genes

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