Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022227 Daucus carota HOM05D008184 ORTHO05D002997 0.0e+00 1146.3 575 100.0
DCAR_025060 Daucus carota HOM05D008184 ORTHO05D002997 1.2e-128 464.5 785 37.7
DCAR_024745 Daucus carota HOM05D008184 ORTHO05D002997 1.2e-90 338.2 675 35.3
DCAR_031319 Daucus carota HOM05D008184 ORTHO05D002997 1.3e-87 328.2 765 32.0
DCAR_031425 Daucus carota HOM05D008184 ORTHO05D002997 4.0e-81 306.6 195 81.0
DCAR_010132 Daucus carota HOM05D008184 ORTHO05D002997 8.4e-79 298.9 195 78.5
DCAR_010926 Daucus carota HOM05D008184 ORTHO05D010791 8.4e-79 298.9 195 78.5
DCAR_022582 Daucus carota HOM05D008184 ORTHO05D010791 8.4e-79 298.9 195 78.5
DCAR_030011 Daucus carota HOM05D008184 ORTHO05D002997 8.4e-79 298.9 195 78.5
DCAR_017847 Daucus carota HOM05D008184 ORTHO05D002997 3.1e-73 280.4 737 29.6
DCAR_015843 Daucus carota HOM05D008184 ORTHO05D002997 4.2e-62 243.4 171 73.7
DCAR_001028 Daucus carota HOM05D008184 ORTHO05D002997 1.4e-57 228.4 863 25.3
DCAR_005348 Daucus carota HOM05D008184 ORTHO05D002997 3.5e-53 213.8 150 78.7
DCAR_001163 Daucus carota HOM05D008184 ORTHO05D002997 2.5e-51 207.6 669 29.6
DCAR_011112 Daucus carota HOM05D008184 ORTHO05D001421 6.3e-50 203.0 464 30.4
DCAR_009978 Daucus carota HOM05D008184 ORTHO05D010791 1.5e-48 198.4 110 86.4
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 1.5e-48 198.4 309 38.8
DCAR_010992 Daucus carota HOM05D008184 ORTHO05D002997 3.4e-48 197.2 591 29.1
DCAR_032236 Daucus carota HOM05D008184 ORTHO05D010791 7.6e-48 196.1 202 53.0
DCAR_031896 Daucus carota HOM05D008184 ORTHO05D002997 1.3e-47 195.3 202 53.0
DCAR_001080 Daucus carota HOM05D008184 ORTHO05D002997 2.3e-44 184.5 370 35.1
DCAR_005112 Daucus carota HOM05D008184 ORTHO05D001421 1.6e-42 178.3 536 28.0
DCAR_026885 Daucus carota HOM05D008184 ORTHO05D002997 6.3e-42 176.4 272 42.3
DCAR_010562 Daucus carota HOM05D008184 ORTHO05D002997 8.2e-42 176.0 316 36.1
DCAR_030557 Daucus carota HOM05D008184 ORTHO05D002997 3.1e-41 174.1 227 45.4
DCAR_022699 Daucus carota HOM05D008184 ORTHO05D002997 2.0e-40 171.4 316 34.5
DCAR_024341 Daucus carota HOM05D008184 ORTHO05D002997 2.6e-40 171.0 479 29.9
DCAR_010539 Daucus carota HOM05D008184 ORTHO05D002997 5.5e-38 163.3 389 31.9
DCAR_030272 Daucus carota HOM05D008184 ORTHO05D001421 7.2e-38 162.9 426 30.0
DCAR_022866 Daucus carota HOM05D036037 ORTHO05D029193 2.6e-35 154.5 534 26.0
DCAR_030518 Daucus carota HOM05D008184 ORTHO05D002997 1.1e-33 149.1 524 26.9
DCAR_005070 Daucus carota HOM05D008184 ORTHO05D010791 1.7e-31 141.7 71 93.0
DCAR_005123 Daucus carota HOM05D008184 ORTHO05D001421 1.2e-29 135.6 325 32.0
DCAR_022305 Daucus carota HOM05D008184 ORTHO05D001421 6.1e-29 133.3 285 33.3
DCAR_030060 Daucus carota HOM05D014044 ORTHO05D015632 1.4e-25 122.1 427 25.5
DCAR_022877 Daucus carota HOM05D008184 ORTHO05D002997 1.2e-24 119.0 435 26.0
DCAR_005964 Daucus carota HOM05D008184 ORTHO05D010791 2.0e-24 118.2 111 53.2
DCAR_030596 Daucus carota HOM05D008184 ORTHO05D002997 1.0e-23 115.9 308 27.9
DCAR_005068 Daucus carota HOM05D002069 ORTHO05D001421 5.0e-23 113.6 419 26.7
DCAR_029708 Daucus carota HOM05D015588 ORTHO05D001421 8.5e-23 112.8 143 41.3
DCAR_022671 Daucus carota HOM05D008184 ORTHO05D015632 1.1e-22 112.5 430 23.7
DCAR_016039 Daucus carota HOM05D002069 ORTHO05D001421 1.6e-21 108.6 92 55.4
DCAR_005299 Daucus carota HOM05D015588 ORTHO05D001421 1.0e-20 105.9 123 43.9
DCAR_017266 Daucus carota HOM05D015588 ORTHO05D001421 1.0e-20 105.9 123 43.9
Lsat_1_v5_gn_2_9540 Lactuca sativa HOM05D002069 ORTHO05D001421 1.8e-20 105.1 628 22.9
DCAR_017409 Daucus carota HOM05D002069 ORTHO05D001421 1.5e-19 102.1 460 24.6
DCAR_017370 Daucus carota HOM05D002069 ORTHO05D001421 1.3e-18 99.0 754 21.8
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 9.1e-17 92.8 613 21.0
ECA233G0312 Erigeron canadensis HOM05D019993 ORTHO05D019101 9.1e-17 92.8 376 24.2
Lsat_1_v5_gn_1_16301 Lactuca sativa HOM05D002069 ORTHO05D001421 1.6e-16 92.0 615 23.6
DCAR_014911 Daucus carota HOM05D002069 ORTHO05D001421 3.5e-16 90.9 767 19.3
DCAR_005298 Daucus carota HOM05D015588 ORTHO05D001421 5.9e-16 90.1 99 46.5
DCAR_024226 Daucus carota HOM05D002069 ORTHO05D001421 5.9e-16 90.1 511 22.9
Lsat_1_v5_gn_3_123300 Lactuca sativa HOM05D005502 ORTHO05D001421 1.0e-15 89.4 304 27.0
DCAR_001716 Daucus carota HOM05D002069 ORTHO05D001421 1.3e-15 89.0 317 27.4
ECA247G2384 Erigeron canadensis HOM05D021710 ORTHO05D001421 1.3e-15 89.0 237 30.4
DCAR_017202 Daucus carota HOM05D002069 ORTHO05D001421 1.7e-15 88.6 317 27.4
DCAR_031481 Daucus carota HOM05D002069 ORTHO05D001421 1.7e-15 88.6 349 23.2
Lsat_1_v5_gn_2_97661 Lactuca sativa HOM05D002069 ORTHO05D001421 1.7e-15 88.6 690 21.7
DCAR_017193 Daucus carota HOM05D002069 ORTHO05D001421 6.5e-15 86.7 181 35.4
Lsat_1_v5_gn_2_70441 Lactuca sativa HOM05D002069 ORTHO05D001421 6.5e-15 86.7 660 21.8
DCAR_015559 Daucus carota HOM05D002069 ORTHO05D001421 1.5e-14 85.5 372 23.1
DCAR_031810 Daucus carota HOM05D008184 ORTHO05D015632 1.5e-14 85.5 445 19.8
Lsat_1_v5_gn_8_3880 Lactuca sativa HOM05D002069 ORTHO05D001421 4.2e-14 84.0 592 22.0
DCAR_011489 Daucus carota HOM05D002069 ORTHO05D001421 7.2e-14 83.2 326 24.5
ECA240G3996 Erigeron canadensis HOM05D002069 ORTHO05D009717 9.4e-14 82.8 270 24.1
ECA233G2044 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.2e-13 82.4 294 25.5
ECA240G4461 Erigeron canadensis HOM05D019993 ORTHO05D019101 1.6e-13 82.0 410 22.9
Lsat_1_v5_gn_4_10720 Lactuca sativa HOM05D002069 ORTHO05D001421 2.1e-13 81.6 261 24.5
DCAR_001085 Daucus carota HOM05D002069 ORTHO05D001421 2.7e-13 81.3 336 24.1
ECA236G0566 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.7e-13 80.5 290 27.9
DCAR_032231 Daucus carota HOM05D008184 ORTHO05D001421 6.1e-13 80.1 396 23.0
DCAR_005230 Daucus carota HOM05D002069 ORTHO05D001421 1.0e-12 79.3 313 21.7
DCAR_024114 Daucus carota HOM05D002069 ORTHO05D001421 1.8e-12 78.6 102 43.1
DCAR_029290 Daucus carota HOM05D014044 ORTHO05D006349 1.8e-12 78.6 210 28.1
DCAR_029821 Daucus carota HOM05D002069 ORTHO05D001421 2.3e-12 78.2 438 20.3
DCAR_001469 Daucus carota HOM05D002069 ORTHO05D001421 5.2e-12 77.0 102 42.2
DCAR_018564 Daucus carota HOM05D014044 ORTHO05D015632 5.2e-12 77.0 133 33.1
ECA232G2184 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.8e-12 76.3 319 24.5
DCAR_017413 Daucus carota HOM05D014044 ORTHO05D006349 2.0e-11 75.1 268 25.4
DCAR_001467 Daucus carota HOM05D002069 ORTHO05D001421 2.6e-11 74.7 102 41.2
DCAR_005136 Daucus carota HOM05D002069 ORTHO05D001421 2.6e-11 74.7 363 23.4
DCAR_005456 Daucus carota HOM05D014044 ORTHO05D006349 2.6e-11 74.7 99 37.4
DCAR_005723 Daucus carota HOM05D002069 ORTHO05D001421 2.6e-11 74.7 363 23.4
DCAR_032318 Daucus carota HOM05D002069 ORTHO05D001421 2.6e-11 74.7 363 23.4
DCAR_009831 Daucus carota HOM05D002069 ORTHO05D001421 3.4e-11 74.3 363 23.4
DCAR_017260 Daucus carota HOM05D008184 ORTHO05D002997 3.4e-11 74.3 86 50.0
HanXRQChr06g0167591 Helianthus annuus HOM05D002069 ORTHO05D001421 3.4e-11 74.3 193 31.1
HanXRQChr10g0309881 Helianthus annuus HOM05D002069 ORTHO05D001421 4.4e-11 73.9 320 21.6
Lsat_1_v5_gn_3_115000 Lactuca sativa HOM05D002069 ORTHO05D001421 4.4e-11 73.9 192 26.0
DCAR_017289 Daucus carota HOM05D002069 ORTHO05D001421 5.7e-11 73.6 109 35.8
DCAR_031358 Daucus carota HOM05D002069 ORTHO05D001421 5.7e-11 73.6 320 22.8
Lsat_1_v5_gn_3_68500 Lactuca sativa HOM05D005502 ORTHO05D001421 9.8e-11 72.8 270 28.1
DCAR_018161 Daucus carota HOM05D008184 ORTHO05D015632 1.3e-10 72.4 100 32.0
ECA240G0190 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.7e-10 72.0 316 22.5
SGA_v2.0_scaffold309G48185 Striga asiatica HOM05D002069 ORTHO05D002997 1.7e-10 72.0 373 22.5
DCAR_018982 Daucus carota HOM05D002069 ORTHO05D001421 2.2e-10 71.6 363 23.1
HanXRQChr14g0445141 Helianthus annuus HOM05D002069 ORTHO05D001421 2.8e-10 71.2 193 30.6
DCAR_030273 Daucus carota HOM05D008184 ORTHO05D002997 1.1e-09 69.3 81 44.4
DCAR_031539 Daucus carota HOM05D002069 ORTHO05D001421 1.8e-09 68.6 475 21.1
Lsat_1_v5_gn_4_177560 Lactuca sativa HOM05D002069 ORTHO05D001421 1.8e-09 68.6 282 23.4
Lsat_1_v5_gn_9_119901 Lactuca sativa HOM05D002069 ORTHO05D001421 3.1e-09 67.8 128 32.8
DCAR_018796 Daucus carota HOM05D008184 ORTHO05D002997 4.1e-09 67.4 503 21.5
DCAR_018056 Daucus carota HOM05D002069 ORTHO05D001421 1.2e-08 65.9 312 23.7
ECA238G2139 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-08 65.5 256 23.8
Lsat_1_v5_gn_3_5101 Lactuca sativa HOM05D024555 ORTHO05D002997 1.6e-08 65.5 100 34.0
HanXRQChr14g0449651 Helianthus annuus HOM05D002069 ORTHO05D001421 2.0e-08 65.1 359 22.6
Lsat_1_v5_gn_3_22140 Lactuca sativa HOM05D005502 ORTHO05D001421 2.0e-08 65.1 247 23.1
DCAR_029689 Daucus carota HOM05D008184 ORTHO05D001421 2.7e-08 64.7 550 21.3
Lsat_1_v5_gn_2_12560 Lactuca sativa HOM05D002069 ORTHO05D001421 2.7e-08 64.7 199 25.1
DCAR_015986 Daucus carota HOM05D008184 ORTHO05D010791 3.5e-08 64.3 184 23.9
HanXRQChr08g0223541 Helianthus annuus HOM05D002069 ORTHO05D001421 3.5e-08 64.3 96 39.6
DCAR_017420 Daucus carota HOM05D036185 ORTHO05D001421 4.5e-08 63.9 102 34.3
ECA236G3427 Erigeron canadensis HOM05D002069 ORTHO05D002997 4.5e-08 63.9 537 21.8
ECA248G3838 Erigeron canadensis HOM05D000795 ORTHO05D000706 4.5e-08 63.9 117 33.3
Lsat_1_v5_gn_4_61420 Lactuca sativa HOM05D005502 ORTHO05D001421 4.5e-08 63.9 197 19.8
SalBow1G7213 Salvia bowleyana HOM05D008275 ORTHO05D009801 4.5e-08 63.9 160 28.1
DCAR_028340 Daucus carota HOM05D002069 ORTHO05D001421 5.9e-08 63.5 175 26.3
ECA238G2168 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.9e-08 63.5 136 31.6
ECA247G1374 Erigeron canadensis HOM05D000045 ORTHO05D001421 5.9e-08 63.5 594 21.7
Lsat_1_v5_gn_6_18980 Lactuca sativa HOM05D005502 ORTHO05D001421 5.9e-08 63.5 586 22.9
Lsat_1_v5_gn_9_19581 Lactuca sativa HOM05D005502 ORTHO05D001421 5.9e-08 63.5 586 22.9
DCAR_002657 Daucus carota HOM05D008184 ORTHO05D002997 7.7e-08 63.2 56 55.4
Lsat_1_v5_gn_7_57041 Lactuca sativa HOM05D002069 ORTHO05D001421 7.7e-08 63.2 82 35.4
Lsat_1_v5_gn_9_70040 Lactuca sativa HOM05D015967 ORTHO05D001421 7.7e-08 63.2 212 25.9
SalBow5G1427 Salvia bowleyana HOM05D008275 ORTHO05D009801 7.7e-08 63.2 175 26.9
Lsat_1_v5_gn_7_92901 Lactuca sativa HOM05D002069 ORTHO05D001421 1.0e-07 62.8 82 36.6
DCAR_001468 Daucus carota HOM05D002069 ORTHO05D001421 1.3e-07 62.4 119 29.4
ECA238G1866 Erigeron canadensis HOM05D001408 ORTHO05D001312 1.3e-07 62.4 112 30.4
ECA247G2702 Erigeron canadensis HOM05D000014 ORTHO05D010592 1.3e-07 62.4 107 30.8
Lsat_1_v5_gn_3_13460 Lactuca sativa HOM05D005502 ORTHO05D001421 1.3e-07 62.4 252 23.8
ECA234G1415 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.7e-07 62.0 107 30.8
ECA236G0264 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.7e-07 62.0 114 34.2
ECA236G4014 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.7e-07 62.0 333 21.6
AUR62031555 Chenopodium quinoa HOM05D007817 ORTHO05D013844 2.3e-07 61.6 214 22.0
ECA234G4655 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.3e-07 61.6 176 29.0
Lsat_1_v5_gn_7_57660 Lactuca sativa HOM05D005502 ORTHO05D001421 2.3e-07 61.6 245 24.9
ECA232G2644 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.9e-07 61.2 417 21.3
Lsat_1_v5_gn_5_176780 Lactuca sativa HOM05D005502 ORTHO05D001421 2.9e-07 61.2 397 22.4
Lsat_1_v5_gn_6_18960 Lactuca sativa HOM05D005502 ORTHO05D001421 2.9e-07 61.2 397 22.4
DCAR_001470 Daucus carota HOM05D010768 ORTHO05D010791 3.8e-07 60.8 172 31.4
DCAR_028094 Daucus carota HOM05D008184 ORTHO05D010791 5.0e-07 60.5 107 32.7
Lsat_1_v5_gn_0_14941 Lactuca sativa HOM05D002069 ORTHO05D001421 5.0e-07 60.5 499 20.0
DCAR_020887 Daucus carota HOM05D015588 ORTHO05D001421 6.5e-07 60.1 87 35.6
DCAR_031308 Daucus carota HOM05D015588 ORTHO05D001421 6.5e-07 60.1 87 35.6
ECA232G1349 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.6e-07 59.7 199 26.6
Lsat_1_v5_gn_9_67100 Lactuca sativa HOM05D005502 ORTHO05D001421 8.6e-07 59.7 244 23.8
DCAR_032232 Daucus carota HOM05D008184 ORTHO05D001421 1.1e-06 59.3 42 64.3
ECA233G3341 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.1e-06 59.3 137 30.7
ECA246G1974 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.1e-06 59.3 558 22.2
Lsat_1_v5_gn_3_120140 Lactuca sativa HOM05D002069 ORTHO05D001421 1.1e-06 59.3 117 29.9
ECA238G3097 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.5e-06 58.9 708 19.6
ECA240G0553 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.5e-06 58.9 137 30.7
SalBow6G1837 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.5e-06 58.9 149 28.9
SalBow8G3441 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.5e-06 58.9 120 28.3
DCAR_010162 Daucus carota HOM05D002069 ORTHO05D001421 1.9e-06 58.5 238 25.6
ECA246G2312 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.9e-06 58.5 99 35.4
Lsat_1_v5_gn_5_31860 Lactuca sativa HOM05D002069 ORTHO05D001421 1.9e-06 58.5 183 26.8
Lsat_1_v5_gn_9_39040 Lactuca sativa HOM05D002069 ORTHO05D001421 1.9e-06 58.5 91 30.8
AUR62033897 Chenopodium quinoa HOM05D007817 ORTHO05D010493 2.5e-06 58.2 222 24.8
DCAR_010267 Daucus carota HOM05D002069 ORTHO05D002997 2.5e-06 58.2 170 28.8
Lsat_1_v5_gn_3_5961 Lactuca sativa HOM05D002069 ORTHO05D001421 2.5e-06 58.2 91 31.9
SalBow1G3428 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.5e-06 58.2 98 33.7
SalBow7G4369 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.5e-06 58.2 157 26.8
SalBow8G1459 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.5e-06 58.2 79 40.5
DCAR_011744 Daucus carota HOM05D010768 ORTHO05D010791 3.2e-06 57.8 107 38.3
DCAR_015033 Daucus carota HOM05D002069 ORTHO05D001421 3.2e-06 57.8 123 35.8
DCAR_016003 Daucus carota HOM05D002069 ORTHO05D001421 3.2e-06 57.8 78 33.3
DCAR_018463 Daucus carota HOM05D002069 ORTHO05D002997 3.2e-06 57.8 235 24.7
ECA233G0231 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.2e-06 57.8 136 30.9
ECA246G2341 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.2e-06 57.8 108 28.7
HanXRQChr03g0078461 Helianthus annuus HOM05D002069 ORTHO05D001421 3.2e-06 57.8 84 36.9
HanXRQChr13g0412961 Helianthus annuus HOM05D002069 ORTHO05D001421 3.2e-06 57.8 140 27.9
Lsat_1_v5_gn_8_125601 Lactuca sativa HOM05D035492 ORTHO05D001421 3.2e-06 57.8 142 32.4
SGA_v2.0_scaffold41G15763 Striga asiatica HOM05D002069 ORTHO05D002997 3.2e-06 57.8 152 24.3
DCAR_029914 Daucus carota HOM05D001196 ORTHO05D005911 4.2e-06 57.4 92 47.8
ECA238G1870 Erigeron canadensis HOM05D000097 ORTHO05D001421 4.2e-06 57.4 164 29.3
ECA246G2142 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.2e-06 57.4 531 19.8
Lsat_1_v5_gn_0_35720 Lactuca sativa HOM05D002069 ORTHO05D001421 4.2e-06 57.4 146 27.4
Lsat_1_v5_gn_3_34060 Lactuca sativa HOM05D002069 ORTHO05D001421 4.2e-06 57.4 285 27.4
SGA_v2.0_scaffold166G38398 Striga asiatica HOM05D002069 ORTHO05D002997 4.2e-06 57.4 121 25.6
DCAR_005179 Daucus carota HOM05D008184 ORTHO05D001421 5.5e-06 57.0 113 32.7
DCAR_030561 Daucus carota HOM05D008184 ORTHO05D002997 5.5e-06 57.0 98 30.6
ECA232G4022 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.5e-06 57.0 137 29.9
ECA238G0948 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.5e-06 57.0 121 34.7
SalBow4G2611 Salvia bowleyana HOM05D008275 ORTHO05D009801 5.5e-06 57.0 183 25.1
ECA232G0092 Erigeron canadensis HOM05D002069 ORTHO05D001421 7.2e-06 56.6 137 29.9
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 7.2e-06 56.6 127 26.8
Lsat_1_v5_gn_8_44320 Lactuca sativa HOM05D005502 ORTHO05D001421 7.2e-06 56.6 231 25.1
DCAR_029899 Daucus carota HOM05D002069 ORTHO05D001421 9.5e-06 56.2 78 33.3


User provided reference genes

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