Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022183 Daucus carota HOM05D008052 ORTHO05D010155 4.3e-83 311.2 150 100.0
Migut.N01951 Erythranthe guttata HOM05D008052 ORTHO05D010155 2.4e-25 119.4 151 43.0
TAR362G0883 Trochodendron aralioides HOM05D008052 ORTHO05D010155 3.8e-23 112.1 140 45.0
TAR633G0175 Trochodendron aralioides HOM05D008052 ORTHO05D010155 1.4e-22 110.2 149 45.0
Cc02_g33610 Coffea canephora HOM05D008052 ORTHO05D010155 1.9e-22 109.8 156 42.3
Nitab4.5_0004570g0050 Nicotiana tabacum HOM05D008052 ORTHO05D010155 2.7e-21 105.9 145 44.8
Sopen12g003550 Solanum pennellii HOM05D008052 ORTHO05D010155 1.8e-20 103.2 152 45.4
Nitab4.5_0000743g0110 Nicotiana tabacum HOM05D008052 ORTHO05D010155 2.3e-20 102.8 125 48.0
SalBow3G2994 Salvia bowleyana HOM05D008052 ORTHO05D010155 2.5e-19 99.4 150 41.3
Potri.013G024500 Populus trichocarpa HOM05D008052 ORTHO05D010155 5.7e-19 98.2 158 42.4
Sc09g0003250 Simmondsia chinensis HOM05D008052 ORTHO05D010155 9.7e-19 97.4 138 47.1
Nn4g26221 Nelumbo nucifera HOM05D008052 ORTHO05D010155 1.4e-17 93.6 138 44.9
PGSC0003DMG400000290 Solanum tuberosum HOM05D008052 ORTHO05D010155 2.0e-16 89.7 150 43.3
MSTRG.28007 Avicennia marina HOM05D008052 ORTHO05D010155 4.5e-16 88.6 151 35.8
Cpa.g.sc48.31 Carica papaya HOM05D008052 ORTHO05D010155 1.7e-15 86.7 153 39.2
Sabra13G0025900 Salix brachista HOM05D008052 ORTHO05D010155 2.2e-15 86.3 151 42.4
CANSAT54G0621 Cannabis sativa HOM05D008052 ORTHO05D010155 9.3e-14 80.9 162 41.4
Ah.06g189190 Amaranthus hybridus HOM05D038607 ORTHO05D010155 7.9e-13 77.8 168 33.9
Ah.05g168010 Amaranthus hybridus HOM05D038607 ORTHO05D010155 1.8e-12 76.6 168 33.9
Manes.09G165300 Manihot esculenta HOM05D008052 ORTHO05D010155 2.3e-12 76.3 150 38.7
Gohir.D11G310900 Gossypium hirsutum HOM05D008052 ORTHO05D010155 3.0e-12 75.9 161 34.8
Gorai.007G342900 Gossypium raimondii HOM05D008052 ORTHO05D010155 6.7e-12 74.7 161 34.2
Atru.chr2.447 Acer truncatum HOM05D008052 ORTHO05D010155 1.9e-11 73.2 158 38.0
Cfa006565 Carpinus fangiana HOM05D008052 ORTHO05D010155 1.9e-11 73.2 143 37.1
PSO170G6008 Papaver somniferum HOM05D008052 ORTHO05D010155 1.9e-11 73.2 167 37.1
Ciclev10003106m.g Citrus clementina HOM05D008052 ORTHO05D010155 2.5e-11 72.8 154 35.1
Haze_04211 Corylus avellana HOM05D008052 ORTHO05D010155 3.3e-11 72.4 143 36.4
SGA_v2.0_scaffold81G26084 Striga asiatica HOM05D008052 ORTHO05D010155 3.3e-11 72.4 130 39.2
Gohir.A11G296000 Gossypium hirsutum HOM05D008052 ORTHO05D010155 5.7e-11 71.6 161 33.5
PGR031G3742 Punica granatum HOM05D008052 ORTHO05D010155 1.7e-10 70.1 162 32.7
MELO3C004280.2 Cucumis melo HOM05D008052 ORTHO05D010155 2.2e-10 69.7 132 40.2
Duzib106G0088 Durio zibethinus HOM05D008052 ORTHO05D010155 2.2e-10 69.7 168 31.0
CsaV3_2G005120 Cucumis sativus L. HOM05D008052 ORTHO05D000003 2.8e-10 69.3 148 37.8
TWI56G0838 Tripterygium wilfordii HOM05D008052 ORTHO05D010155 4.8e-10 68.6 129 40.3
QL02p094100 Quercus lobata HOM05D008052 ORTHO05D010155 1.1e-09 67.4 150 33.3
Solyc12g008610.3 Solanum lycopersicum HOM05D008052 ORTHO05D010155 1.4e-09 67.0 84 47.6
Thecc.05G305400 Theobroma cacao HOM05D008052 ORTHO05D010155 1.5e-08 63.5 159 34.0
ClCG02G015920 Citrullus lanatus HOM05D008052 ORTHO05D010155 2.0e-08 63.2 132 37.1
FAN05G1355 Fragaria x ananassa HOM05D000001 ORTHO05D000003 5.9e-08 61.6 139 36.0
FAN05G4790 Fragaria x ananassa HOM05D000001 ORTHO05D000003 5.9e-08 61.6 139 36.0
Prupe.6G328200 Prunus persica HOM05D008052 ORTHO05D010155 5.9e-08 61.6 154 37.7
FAN14G3020 Fragaria x ananassa HOM05D008052 ORTHO05D010155 1.7e-07 60.1 155 36.1
unitig_0.g2377 Utricularia gibba HOM05D008052 ORTHO05D010155 2.9e-07 59.3 126 38.1
FvH4_6g05580 Fragaria vesca HOM05D008052 ORTHO05D010155 3.8e-07 58.9 155 35.5
PSO302G0085 Papaver somniferum HOM05D008052 ORTHO05D010155 3.8e-07 58.9 162 35.2
THA.LOC104802806 Tarenaya hassleriana HOM05D008052 ORTHO05D010155 5.0e-07 58.5 131 38.9
Sp2g20660 Schrenkiella parvula HOM05D008052 ORTHO05D010155 1.4e-06 57.0 146 32.9
Cfa012653 Carpinus fangiana HOM05D008052 ORTHO05D010155 1.9e-06 56.6 90 44.4
AT5G27440 Arabidopsis thaliana HOM05D008052 ORTHO05D010155 2.5e-06 56.2 152 31.6
Lsat_1_v5_gn_2_64240 Lactuca sativa HOM05D008052 ORTHO05D010155 2.5e-06 56.2 158 31.6
Sed0020219 Sechium edule HOM05D008052 ORTHO05D010155 4.2e-06 55.5 130 34.6
Aqoxy2G03290 Aquilegia oxysepala HOM05D008052 ORTHO05D010155 7.2e-06 54.7 158 32.3
C07p40900 Brassica napus HOM05D008052 ORTHO05D010155 9.4e-06 54.3 96 37.5
COL.COLO4_13498 Corchorus olitorius HOM05D008052 ORTHO05D010155 9.4e-06 54.3 157 31.2


User provided reference genes

Program Settings