Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022157 Daucus carota HOM05D002069 ORTHO05D010791 2.6e-155 552.0 274 100.0
DCAR_010394 Daucus carota HOM05D002069 ORTHO05D010791 4.3e-81 305.4 196 80.1
DCAR_009686 Daucus carota HOM05D002069 ORTHO05D010791 2.5e-73 279.6 205 62.9
DCAR_010392 Daucus carota HOM05D002069 ORTHO05D010791 2.1e-67 260.0 221 57.9
DCAR_028607 Daucus carota HOM05D002069 ORTHO05D010791 2.5e-65 253.1 175 74.3
DCAR_030066 Daucus carota HOM05D002069 ORTHO05D010791 4.9e-61 238.8 183 62.3
DCAR_017289 Daucus carota HOM05D002069 ORTHO05D001421 7.8e-51 204.9 142 66.9
DCAR_028623 Daucus carota HOM05D002069 ORTHO05D002997 1.5e-46 190.7 160 56.9
DCAR_027914 Daucus carota HOM05D002069 ORTHO05D010791 6.7e-42 175.3 132 64.4
DCAR_014911 Daucus carota HOM05D002069 ORTHO05D001421 4.9e-37 159.1 173 46.8
DCAR_029821 Daucus carota HOM05D002069 ORTHO05D001421 4.9e-37 159.1 173 46.8
DCAR_010162 Daucus carota HOM05D002069 ORTHO05D001421 4.6e-35 152.5 231 35.5
DCAR_018463 Daucus carota HOM05D002069 ORTHO05D002997 6.7e-34 148.7 205 39.5
DCAR_007478 Daucus carota HOM05D002069 ORTHO05D002997 1.5e-33 147.5 208 39.9
DCAR_031481 Daucus carota HOM05D002069 ORTHO05D001421 7.4e-33 145.2 172 41.3
DCAR_015559 Daucus carota HOM05D002069 ORTHO05D001421 1.3e-32 144.4 198 38.4
DCAR_002013 Daucus carota HOM05D002069 ORTHO05D010791 6.2e-32 142.1 169 42.6
DCAR_005230 Daucus carota HOM05D002069 ORTHO05D001421 5.5e-28 129.0 200 36.5
DCAR_005154 Daucus carota HOM05D002069 ORTHO05D010791 4.8e-24 115.9 177 35.0
DCAR_001130 Daucus carota HOM05D047378 ORTHO05D010791 9.0e-23 111.7 126 43.7
DCAR_022867 Daucus carota HOM05D002069 ORTHO05D010791 7.6e-22 108.6 92 58.7
DCAR_009240 Daucus carota HOM05D002069 ORTHO05D010791 8.5e-21 105.1 138 40.6
DCAR_012123 Daucus carota HOM05D002069 ORTHO05D010791 8.5e-21 105.1 111 49.5
DCAR_024226 Daucus carota HOM05D002069 ORTHO05D001421 1.1e-20 104.8 195 34.4
DCAR_028340 Daucus carota HOM05D002069 ORTHO05D001421 1.1e-20 104.8 124 42.7
DCAR_024114 Daucus carota HOM05D002069 ORTHO05D001421 1.4e-20 104.4 177 32.8
DCAR_010992 Daucus carota HOM05D008184 ORTHO05D002997 2.1e-19 100.5 154 37.0
DCAR_017370 Daucus carota HOM05D002069 ORTHO05D001421 2.1e-19 100.5 176 30.7
DCAR_010266 Daucus carota HOM05D008184 ORTHO05D010791 1.0e-18 98.2 168 32.7
DCAR_031539 Daucus carota HOM05D002069 ORTHO05D001421 1.0e-18 98.2 136 39.7
DCAR_031350 Daucus carota HOM05D002069 ORTHO05D001421 1.9e-17 94.0 129 35.7
DCAR_005446 Daucus carota HOM05D002069 ORTHO05D002997 4.3e-17 92.8 146 35.6
DCAR_005090 Daucus carota HOM05D002069 ORTHO05D002997 5.7e-17 92.4 173 31.8
DCAR_028094 Daucus carota HOM05D008184 ORTHO05D010791 7.4e-17 92.0 157 36.9
DCAR_015986 Daucus carota HOM05D008184 ORTHO05D010791 1.7e-16 90.9 157 35.0
DCAR_030561 Daucus carota HOM05D008184 ORTHO05D002997 1.7e-16 90.9 157 35.0
DCAR_022671 Daucus carota HOM05D008184 ORTHO05D015632 2.2e-16 90.5 157 35.0
DCAR_030557 Daucus carota HOM05D008184 ORTHO05D002997 6.3e-16 89.0 185 31.4
DCAR_001163 Daucus carota HOM05D008184 ORTHO05D002997 4.1e-15 86.3 196 30.1
DCAR_017193 Daucus carota HOM05D002069 ORTHO05D001421 6.9e-15 85.5 100 41.0
DCAR_011744 Daucus carota HOM05D010768 ORTHO05D010791 1.2e-14 84.7 156 32.7
DCAR_026885 Daucus carota HOM05D008184 ORTHO05D002997 1.2e-14 84.7 158 32.9
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 2.0e-14 84.0 205 30.2
DCAR_001470 Daucus carota HOM05D010768 ORTHO05D010791 7.7e-14 82.0 157 31.8
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 1.3e-13 81.3 157 31.8
DCAR_010539 Daucus carota HOM05D008184 ORTHO05D002997 1.7e-13 80.9 154 32.5
DCAR_005964 Daucus carota HOM05D008184 ORTHO05D010791 2.2e-13 80.5 156 32.1
DCAR_022699 Daucus carota HOM05D008184 ORTHO05D002997 2.2e-13 80.5 156 32.1
Lsat_1_v5_gn_9_67060 Lactuca sativa HOM05D005502 ORTHO05D001421 3.8e-13 79.7 144 31.2
DCAR_010926 Daucus carota HOM05D008184 ORTHO05D010791 5.0e-13 79.3 176 30.7
DCAR_030011 Daucus carota HOM05D008184 ORTHO05D002997 5.0e-13 79.3 176 30.7
Lsat_1_v5_gn_8_12700 Lactuca sativa HOM05D005502 ORTHO05D001421 8.5e-13 78.6 144 31.9
AUR62033780 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.1e-12 78.2 165 31.5
DCAR_009128 Daucus carota HOM05D010768 ORTHO05D010791 1.1e-12 78.2 153 31.4
DCAR_009978 Daucus carota HOM05D008184 ORTHO05D010791 1.1e-12 78.2 222 28.8
DCAR_010132 Daucus carota HOM05D008184 ORTHO05D002997 1.1e-12 78.2 222 28.8
DCAR_015843 Daucus carota HOM05D008184 ORTHO05D002997 1.1e-12 78.2 222 28.8
DCAR_022582 Daucus carota HOM05D008184 ORTHO05D010791 1.1e-12 78.2 222 28.8
ECA248G3613 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.1e-12 78.2 190 28.4
Lsat_1_v5_gn_3_22140 Lactuca sativa HOM05D005502 ORTHO05D001421 1.4e-12 77.8 139 32.4
DCAR_031425 Daucus carota HOM05D008184 ORTHO05D002997 4.2e-12 76.3 172 30.2
Ah.03g145400 Amaranthus hybridus HOM05D006463 ORTHO05D002997 5.5e-12 75.9 163 28.2
DCAR_001028 Daucus carota HOM05D008184 ORTHO05D002997 5.5e-12 75.9 150 34.0
DCAR_017847 Daucus carota HOM05D008184 ORTHO05D002997 5.5e-12 75.9 233 25.3
DCAR_025060 Daucus carota HOM05D008184 ORTHO05D002997 5.5e-12 75.9 185 27.6
DCAR_031319 Daucus carota HOM05D008184 ORTHO05D002997 5.5e-12 75.9 192 30.2
Ah.14g082230 Amaranthus hybridus HOM05D006463 ORTHO05D002997 7.2e-12 75.5 163 28.2
AUR62026206 Chenopodium quinoa HOM05D006463 ORTHO05D002997 9.4e-12 75.1 241 24.5
ECA238G3097 Erigeron canadensis HOM05D002069 ORTHO05D001421 9.4e-12 75.1 184 31.5
ECA238G0549 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.2e-11 74.7 155 32.9
AUR62018847 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.6e-11 74.3 165 30.3
DCAR_031891 Daucus carota HOM05D006463 ORTHO05D010791 1.6e-11 74.3 148 25.7
DCAR_030596 Daucus carota HOM05D008184 ORTHO05D002997 2.1e-11 73.9 133 31.6
Ah.05g176190 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.7e-11 73.6 161 28.0
AUR62040774 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.6e-11 73.2 165 29.1
Ah.10g026780 Amaranthus hybridus HOM05D006463 ORTHO05D002997 4.7e-11 72.8 195 24.6
AUR62033155 Chenopodium quinoa HOM05D006463 ORTHO05D002997 6.1e-11 72.4 198 25.3
Lsat_1_v5_gn_8_19140 Lactuca sativa HOM05D005502 ORTHO05D001421 7.9e-11 72.0 160 29.4
AUR62021797 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.0e-10 71.6 165 30.3
DCAR_001557 Daucus carota HOM05D008184 ORTHO05D002997 1.0e-10 71.6 112 33.0
DCAR_031896 Daucus carota HOM05D008184 ORTHO05D002997 1.0e-10 71.6 179 28.5
HanXRQChr13g0412961 Helianthus annuus HOM05D002069 ORTHO05D001421 1.0e-10 71.6 163 27.6
HanXRQChr14g0449651 Helianthus annuus HOM05D002069 ORTHO05D001421 1.0e-10 71.6 163 27.6
AUR62025070 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.8e-10 70.9 170 27.1
AUR62040414 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.3e-10 70.5 195 25.1
AUR62027765 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.0e-10 70.1 165 30.9
AUR62027906 Chenopodium quinoa HOM05D006463 ORTHO05D002997 5.1e-10 69.3 195 24.6
AUR62014151 Chenopodium quinoa HOM05D006463 ORTHO05D002997 8.8e-10 68.6 195 24.1
DCAR_032236 Daucus carota HOM05D008184 ORTHO05D010791 8.8e-10 68.6 160 30.0
SGA_v2.0_scaffold21G09314 Striga asiatica HOM05D010580 ORTHO05D002997 8.8e-10 68.6 168 29.2
AUR62039012 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.1e-09 68.2 195 24.1
AUR62039014 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.1e-09 68.2 195 24.1
ECA240G0190 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.1e-09 68.2 160 26.9
AUR62028449 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.5e-09 67.8 171 27.5
ECA240G2037 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.5e-09 67.8 123 34.1
AUR62005367 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.0e-09 67.4 228 26.3
ECA246G2841 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.0e-09 67.4 152 28.9
AUR62008971 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.6e-09 67.0 171 27.5
AUR62026604 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.6e-09 67.0 231 26.8
AUR62038451 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.6e-09 67.0 195 24.1
AUR62044722 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.6e-09 67.0 195 24.1
ECA247G2702 Erigeron canadensis HOM05D000014 ORTHO05D010592 4.4e-09 66.2 162 27.2
Lsat_1_v5_gn_6_18980 Lactuca sativa HOM05D005502 ORTHO05D001421 4.4e-09 66.2 198 24.2
Lsat_1_v5_gn_9_19581 Lactuca sativa HOM05D005502 ORTHO05D001421 4.4e-09 66.2 198 24.2
AUR62012395 Chenopodium quinoa HOM05D006463 ORTHO05D002997 5.7e-09 65.9 228 25.9
DCAR_005060 Daucus carota HOM05D017553 ORTHO05D010791 5.7e-09 65.9 128 28.9
Lsat_1_v5_gn_2_50840 Lactuca sativa HOM05D005502 ORTHO05D001421 5.7e-09 65.9 185 24.9
ECA233G5305 Erigeron canadensis HOM05D002069 ORTHO05D001421 7.4e-09 65.5 137 32.8
Lsat_1_v5_gn_3_123280 Lactuca sativa HOM05D005502 ORTHO05D001421 7.4e-09 65.5 206 24.8
Lsat_1_v5_gn_4_14740 Lactuca sativa HOM05D001288 ORTHO05D001123 1.3e-08 64.7 145 33.1
ECA240G0900 Erigeron canadensis HOM05D000006 ORTHO05D000091 1.7e-08 64.3 170 28.8
AUR62033286 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.2e-08 63.9 205 25.9
DCAR_022746 Daucus carota HOM05D008184 ORTHO05D010791 2.2e-08 63.9 133 33.1
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.8e-08 63.5 155 28.4
AUR62004909 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.7e-08 63.2 232 25.4
AUR62006153 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.7e-08 63.2 228 26.3
AUR62034798 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.7e-08 63.2 157 28.0
DCAR_032318 Daucus carota HOM05D002069 ORTHO05D001421 3.7e-08 63.2 173 28.3
SGA_v2.0_scaffold180G39665 Striga asiatica HOM05D002069 ORTHO05D002997 4.8e-08 62.8 167 28.7
ECA236G0566 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.3e-08 62.4 158 29.1
DCAR_001080 Daucus carota HOM05D008184 ORTHO05D002997 8.2e-08 62.0 100 36.0
DCAR_005070 Daucus carota HOM05D008184 ORTHO05D010791 8.2e-08 62.0 132 31.1
Lsat_1_v5_gn_5_165781 Lactuca sativa HOM05D005502 ORTHO05D001421 1.1e-07 61.6 187 26.2
AUR62040496 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.4e-07 61.2 165 28.5
ECA236G4011 Erigeron canadensis HOM05D002069 ORTHO05D002997 1.4e-07 61.2 231 26.4
Ah.05g175690 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-07 60.8 142 28.2
Ah.13g066380 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-07 60.8 142 28.2
Ah.15g095980 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-07 60.8 142 28.2
DCAR_010267 Daucus carota HOM05D002069 ORTHO05D002997 1.8e-07 60.8 176 23.3
ECA233G0457 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.8e-07 60.8 170 27.6
Lsat_1_v5_gn_5_154201 Lactuca sativa HOM05D005502 ORTHO05D001421 1.8e-07 60.8 118 28.8
ECA240G4398 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.4e-07 60.5 121 32.2
Lsat_1_v5_gn_2_129340 Lactuca sativa HOM05D005502 ORTHO05D001421 2.4e-07 60.5 187 24.1
Lsat_1_v5_gn_6_50460 Lactuca sativa HOM05D005502 ORTHO05D001421 2.4e-07 60.5 106 32.1
AUR62027356 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.1e-07 60.1 208 26.4
AUR62030053 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.1e-07 60.1 165 30.3
DCAR_030060 Daucus carota HOM05D014044 ORTHO05D015632 3.1e-07 60.1 94 36.2
ECA238G2139 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.1e-07 60.1 144 27.8
ECA247G0831 Erigeron canadensis HOM05D002069 ORTHO05D002997 3.1e-07 60.1 147 29.3
HanXRQChr02g0033881 Helianthus annuus HOM05D002069 ORTHO05D002997 3.1e-07 60.1 146 28.1
HanXRQChr08g0207601 Helianthus annuus HOM05D002069 ORTHO05D001421 3.1e-07 60.1 201 26.4
Lsat_1_v5_gn_2_65260 Lactuca sativa HOM05D002069 ORTHO05D001421 3.1e-07 60.1 163 25.8
Lsat_1_v5_gn_3_34060 Lactuca sativa HOM05D002069 ORTHO05D001421 3.1e-07 60.1 163 25.8
Lsat_1_v5_gn_4_176160 Lactuca sativa HOM05D002069 ORTHO05D001421 3.1e-07 60.1 163 25.8
Lsat_1_v5_gn_4_41940 Lactuca sativa HOM05D002069 ORTHO05D001421 3.1e-07 60.1 159 28.3
Lsat_1_v5_gn_5_100580 Lactuca sativa HOM05D002069 ORTHO05D001421 3.1e-07 60.1 163 25.8
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 3.1e-07 60.1 163 25.8
Lsat_1_v5_gn_9_46640 Lactuca sativa HOM05D002069 ORTHO05D001421 3.1e-07 60.1 163 25.8
DCAR_010562 Daucus carota HOM05D008184 ORTHO05D002997 4.1e-07 59.7 118 32.2
Lsat_1_v5_gn_8_79561 Lactuca sativa HOM05D002069 ORTHO05D001421 4.1e-07 59.7 162 25.9
Ah.04g160940 Amaranthus hybridus HOM05D006463 ORTHO05D002997 5.3e-07 59.3 142 27.5
ECA246G4161 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.3e-07 59.3 82 40.2
Lsat_1_v5_gn_3_5621 Lactuca sativa HOM05D002069 ORTHO05D001421 5.3e-07 59.3 171 25.7
Lsat_1_v5_gn_6_18960 Lactuca sativa HOM05D005502 ORTHO05D001421 5.3e-07 59.3 186 23.1
Lsat_1_v5_gn_8_7981 Lactuca sativa HOM05D005502 ORTHO05D001421 5.3e-07 59.3 117 29.9
DCAR_030104 Daucus carota HOM05D014044 ORTHO05D006349 6.9e-07 58.9 96 35.4
ECA234G0167 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.9e-07 58.9 144 27.8
Lsat_1_v5_gn_5_79241 Lactuca sativa HOM05D005502 ORTHO05D001421 6.9e-07 58.9 116 29.3
Lsat_1_v5_gn_8_17641 Lactuca sativa HOM05D015967 ORTHO05D029970 6.9e-07 58.9 194 27.8
Lsat_1_v5_gn_0_7661 Lactuca sativa HOM05D005502 ORTHO05D001421 9.1e-07 58.5 137 28.5
Lsat_1_v5_gn_1_9880 Lactuca sativa HOM05D005502 ORTHO05D001421 9.1e-07 58.5 137 28.5
Lsat_1_v5_gn_2_129320 Lactuca sativa HOM05D005502 ORTHO05D001421 9.1e-07 58.5 186 23.1
Lsat_1_v5_gn_5_176780 Lactuca sativa HOM05D005502 ORTHO05D001421 9.1e-07 58.5 186 23.1
Lsat_1_v5_gn_9_39620 Lactuca sativa HOM05D005502 ORTHO05D001421 9.1e-07 58.5 121 28.9
ECA246G2142 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.2e-06 58.2 156 28.2
Lsat_1_v5_gn_1_21581 Lactuca sativa HOM05D005502 ORTHO05D001421 1.2e-06 58.2 137 28.5
Lsat_1_v5_gn_5_95781 Lactuca sativa HOM05D000580 ORTHO05D001785 1.2e-06 58.2 141 27.7
Lsat_1_v5_gn_6_86360 Lactuca sativa HOM05D005502 ORTHO05D001421 1.2e-06 58.2 137 28.5
Lsat_1_v5_gn_8_34680 Lactuca sativa HOM05D005502 ORTHO05D001421 1.2e-06 58.2 137 28.5
Lsat_1_v5_gn_3_8220 Lactuca sativa HOM05D005502 ORTHO05D001421 1.5e-06 57.8 137 28.5
Lsat_1_v5_gn_5_106280 Lactuca sativa HOM05D005502 ORTHO05D001421 1.5e-06 57.8 136 28.7
AUR62044122 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.6e-06 57.0 145 26.9
DCAR_023747 Daucus carota HOM05D010768 ORTHO05D010791 2.6e-06 57.0 79 38.0
Lsat_1_v5_gn_5_166541 Lactuca sativa HOM05D005502 ORTHO05D001421 2.6e-06 57.0 137 27.7
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 2.6e-06 57.0 159 26.4
AUR62038449 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.4e-06 56.6 149 24.8
ECA247G1374 Erigeron canadensis HOM05D000045 ORTHO05D001421 3.4e-06 56.6 226 25.7
ECA234G1415 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.5e-06 56.2 162 25.3
Lsat_1_v5_gn_4_180461 Lactuca sativa HOM05D005502 ORTHO05D001421 4.5e-06 56.2 137 27.0
ECA232G1349 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.9e-06 55.8 162 28.4
ECA240G2781 Erigeron canadensis HOM05D000006 ORTHO05D000091 5.9e-06 55.8 159 25.8


User provided reference genes

Program Settings