Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022140 Daucus carota HOM05D007682 ORTHO05D009690 5.1e-24 113.6 59 100.0
DCAR_022138 Daucus carota HOM05D007682 ORTHO05D009690 6.7e-16 86.7 52 86.5
Lsat_1_v5_gn_7_72960 Lactuca sativa HOM05D007682 ORTHO05D009690 5.7e-15 83.6 55 78.2
PSO407G0292 Papaver somniferum HOM05D007682 ORTHO05D009690 2.2e-14 81.6 55 74.5
Potri.005G023000 Populus trichocarpa HOM05D007682 ORTHO05D009690 2.8e-14 81.3 58 70.7
Cc02_g34370 Coffea canephora HOM05D007682 ORTHO05D009690 3.7e-14 80.9 55 74.5
CDE05G1347 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 4.8e-14 80.5 55 72.7
CDE11G0615 Ceratophyllum demersum HOM05D007682 ORTHO05D009690 4.8e-14 80.5 55 72.7
Migut.N02098 Erythranthe guttata HOM05D007682 ORTHO05D009690 4.8e-14 80.5 52 78.8
PSO170G1207 Papaver somniferum HOM05D007682 ORTHO05D009690 4.8e-14 80.5 55 72.7
CSS0049840 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 6.3e-14 80.1 55 72.7
HanXRQChr11g0340111 Helianthus annuus HOM05D007682 ORTHO05D009690 6.3e-14 80.1 55 74.5
RcHm_v2.0_Chr6g0276771 Rosa chinensis HOM05D007682 ORTHO05D009690 6.3e-14 80.1 55 74.5
Thecc.05G315600 Theobroma cacao HOM05D007682 ORTHO05D009690 6.3e-14 80.1 55 74.5
FAN20G0672 Fragaria x ananassa HOM05D007682 ORTHO05D009690 8.2e-14 79.7 55 74.5
FAN24G1339 Fragaria x ananassa HOM05D007682 ORTHO05D009690 8.2e-14 79.7 55 74.5
Nn4g25761 Nelumbo nucifera HOM05D007682 ORTHO05D009690 8.2e-14 79.7 55 70.9
Prupe.8G021600 Prunus persica HOM05D007682 ORTHO05D009690 1.1e-13 79.3 55 72.7
TAR633G0769 Trochodendron aralioides HOM05D007682 ORTHO05D009690 1.1e-13 79.3 55 72.7
GSVIVG01031165001 Vitis vinifera HOM05D000036 ORTHO05D000441 1.1e-13 79.3 55 74.5
ECA236G4368 Erigeron canadensis HOM05D000036 ORTHO05D000441 1.4e-13 79.0 52 76.9
Lalb_Chr15g0077471 Lupinus albus HOM05D007682 ORTHO05D009690 1.4e-13 79.0 56 71.4
Atru.chr2.100 Acer truncatum HOM05D007682 ORTHO05D009690 1.8e-13 78.6 55 72.7
Peaxi162Scf00037g01515 Petunia axillaris HOM05D007682 ORTHO05D009690 1.8e-13 78.6 52 76.9
SGA_v2.0_scaffold81G26104 Striga asiatica HOM05D007682 ORTHO05D009690 1.8e-13 78.6 52 75.0
Manes.08G115600 Manihot esculenta HOM05D007682 ORTHO05D009690 2.4e-13 78.2 55 72.7
Sabra05G0029000 Salix brachista HOM05D007682 ORTHO05D009690 2.4e-13 78.2 58 69.0
FAN15G0817 Fragaria x ananassa HOM05D007682 ORTHO05D009690 3.1e-13 77.8 55 72.7
ATR0693G225 Amborella trichopoda HOM05D007682 ORTHO05D009690 5.3e-13 77.0 47 83.0
Glyma.19G231600 Glycine max HOM05D007682 ORTHO05D009690 5.3e-13 77.0 55 70.9
Gohir.A08G208100 Gossypium hirsutum HOM05D007682 ORTHO05D009690 5.3e-13 77.0 55 70.9
THA.LOC104821730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 5.3e-13 77.0 52 75.0
arahy.Tifrunner.gnm1.ann1.P6132C Arachis hypogaea HOM05D007682 ORTHO05D009690 6.9e-13 76.6 55 70.9
arahy.Tifrunner.gnm1.ann1.S47DRU Arachis hypogaea HOM05D007682 ORTHO05D009690 6.9e-13 76.6 55 70.9
CAN.G1273.42 Capsicum annuum HOM05D007682 ORTHO05D009690 6.9e-13 76.6 52 75.0
Nitab4.5_0003113g0070 Nicotiana tabacum HOM05D007682 ORTHO05D009690 6.9e-13 76.6 52 75.0
Oeu010924.1 Olea europaea HOM05D007682 ORTHO05D009690 6.9e-13 76.6 52 73.1
Solyc01g099930.3 Solanum lycopersicum HOM05D007682 ORTHO05D009690 6.9e-13 76.6 52 75.0
Gorai.007G301900 Gossypium raimondii HOM05D007682 ORTHO05D009690 9.1e-13 76.3 55 70.9
Hma1.2p1_0472F.1_g159680 Hydrangea macrophylla HOM05D007682 ORTHO05D009690 9.1e-13 76.3 52 75.0
Actinidia21502 Actinidia chinensis HOM05D007682 ORTHO05D009690 1.2e-12 75.9 55 70.9
Duzib177G0692 Durio zibethinus HOM05D007682 ORTHO05D009690 1.5e-12 75.5 55 70.9
Gohir.D08G224900 Gossypium hirsutum HOM05D007682 ORTHO05D009690 1.5e-12 75.5 55 69.1
MBI19_g44105_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 1.5e-12 75.5 51 74.5
MSTRG.27972 Avicennia marina HOM05D007682 ORTHO05D009690 2.0e-12 75.1 52 71.2
BcaNung04745 Brassica carinata HOM05D007682 ORTHO05D009690 2.0e-12 75.1 52 73.1
Glyma.03G234200 Glycine max HOM05D007682 ORTHO05D009690 2.0e-12 75.1 55 69.1
Phvul.006G088300 Phaseolus vulgaris HOM05D007682 ORTHO05D009690 2.0e-12 75.1 55 69.1
THA.LOC104818730 Tarenaya hassleriana HOM05D007682 ORTHO05D009690 2.0e-12 75.1 52 73.1
HPP92_010663 Vanilla planifolia HOM05D007682 ORTHO05D009690 2.0e-12 75.1 58 70.7
Gohir.D11G279700 Gossypium hirsutum HOM05D007682 ORTHO05D009690 2.6e-12 74.7 55 69.1
TWI56G1223 Tripterygium wilfordii HOM05D007682 ORTHO05D009690 2.6e-12 74.7 52 71.2
Gohir.A11G269500 Gossypium hirsutum HOM05D007682 ORTHO05D009690 3.4e-12 74.3 55 69.1
Medtr7g112600 Medicago truncatula HOM05D007682 ORTHO05D009690 3.4e-12 74.3 55 69.1
Psat3g011680 Pisum sativum HOM05D007682 ORTHO05D009690 3.4e-12 74.3 55 69.1
Sed0011876 Sechium edule HOM05D007682 ORTHO05D009690 3.4e-12 74.3 55 69.1
TPR.G1619 Trifolium pratense HOM05D007682 ORTHO05D009690 3.4e-12 74.3 55 69.1
Nitab4.5_0003497g0050 Nicotiana tabacum HOM05D007682 ORTHO05D009690 4.5e-12 73.9 47 80.9
Sp2g20980 Schrenkiella parvula HOM05D007682 ORTHO05D009690 4.5e-12 73.9 52 73.1
SEGI_39810 Sequoiadendron giganteum HOM05D007682 ORTHO05D009690 4.5e-12 73.9 52 69.2
Gorai.004G238900 Gossypium raimondii HOM05D007682 ORTHO05D009690 5.9e-12 73.6 55 67.3
MD10G1017700 Malus domestica HOM05D007682 ORTHO05D009690 5.9e-12 73.6 52 71.2
A06p37270 Brassica napus HOM05D007682 ORTHO05D009690 7.7e-12 73.2 52 71.2
C07p41180 Brassica napus HOM05D007682 ORTHO05D009690 7.7e-12 73.2 52 71.2
BolC7t44646H Brassica oleracea HOM05D007682 ORTHO05D009690 7.7e-12 73.2 52 71.2
BraA06t26650Z Brassica rapa HOM05D007682 ORTHO05D009690 7.7e-12 73.2 52 71.2
Dinv30837 Davidia involucrata HOM05D007682 ORTHO05D009690 1.0e-11 72.8 54 68.5
Aa31LG11G9610 Aethionema arabicum HOM05D007682 ORTHO05D009690 1.3e-11 72.4 52 71.2
AUR62000737 Chenopodium quinoa HOM05D007682 ORTHO05D009690 1.3e-11 72.4 52 69.2
CARHR186340 Cardamine hirsuta HOM05D007682 ORTHO05D009690 1.7e-11 72.0 52 71.2
Haze_04118 Corylus avellana HOM05D007682 ORTHO05D009690 1.7e-11 72.0 52 69.2
CsaV3_1G038640 Cucumis sativus L. HOM05D007682 ORTHO05D009690 1.7e-11 72.0 55 67.3
Eucgr.H03256 Eucalyptus grandis HOM05D007682 ORTHO05D009690 1.7e-11 72.0 52 69.2
AT5G27860 Arabidopsis thaliana HOM05D007682 ORTHO05D009690 2.2e-11 71.6 52 71.2
PGR031G1366 Punica granatum HOM05D007682 ORTHO05D009690 2.2e-11 71.6 52 69.2
AUR62005227 Chenopodium quinoa HOM05D007682 ORTHO05D009690 2.9e-11 71.2 52 67.3
CiPaw.08G159600 Carya illinoinensis HOM05D007682 ORTHO05D009690 6.5e-11 70.1 52 67.3
unitig_699.g19250 Utricularia gibba HOM05D007682 ORTHO05D009690 6.5e-11 70.1 47 72.3
HPP92_010684 Vanilla planifolia HOM05D007682 ORTHO05D009690 6.5e-11 70.1 51 76.5
Ah.06g189950 Amaranthus hybridus HOM05D007682 ORTHO05D009690 8.5e-11 69.7 47 74.5
Os12g0516700 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 8.5e-11 69.7 52 63.5
Os12g0554000 Oryza sativa ssp. japonica HOM05D007682 ORTHO05D009690 8.5e-11 69.7 52 63.5
QL03p019528 Quercus lobata HOM05D007682 ORTHO05D009690 1.1e-10 69.3 52 65.4
EL10Ac4g09894 Beta vulgaris HOM05D007682 ORTHO05D009690 1.9e-10 68.6 47 72.3
Sc16g0008750 Simmondsia chinensis HOM05D000036 ORTHO05D001038 3.2e-10 67.8 55 61.8
SMO367G0406 Selaginella moellendorffii HOM05D007682 ORTHO05D009690 5.5e-10 67.0 52 65.4
Cfa006654 Carpinus fangiana HOM05D007682 ORTHO05D009690 2.1e-09 65.1 52 63.5
Hund07111 Selenicereus undatus HOM05D007682 ORTHO05D009690 2.7e-09 64.7 47 68.1
AL6G39080 Arabidopsis lyrata HOM05D007682 ORTHO05D009690 4.7e-09 63.9 52 65.4
Zm00001eb410110 Zea mays HOM05D007682 ORTHO05D009690 1.0e-08 62.8 54 57.4
CSS0031357 Camellia sinensis var. sinensis HOM05D007682 ORTHO05D009690 3.9e-08 60.8 55 54.5
Lj1g0016295 Lotus japonicus HOM05D007682 ORTHO05D009690 3.9e-08 60.8 60 56.7
MBI19_g47767_MAGBIO Magnolia biondii HOM05D007682 ORTHO05D009690 2.6e-07 58.2 51 62.7


User provided reference genes

Program Settings