Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022094 Daucus carota HOM05D005713 ORTHO05D007751 0.0e+00 1095.5 556 100.0
TAR381G0424 Trochodendron aralioides HOM05D005713 ORTHO05D007751 5.0e-222 774.6 528 73.7
Gohir.A03G180100 Gossypium hirsutum HOM05D005713 ORTHO05D007751 5.6e-221 771.2 561 71.8
Gohir.D02G203009 Gossypium hirsutum HOM05D005713 ORTHO05D007751 3.6e-220 768.5 561 71.5
Nitab4.5_0001361g0160 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.8e-219 766.1 561 69.7
Gorai.005G229000 Gossypium raimondii HOM05D005713 ORTHO05D007751 2.3e-219 765.8 561 71.7
CiPaw.06G137900 Carya illinoinensis HOM05D005713 ORTHO05D007751 5.2e-219 764.6 562 69.9
QL11p042284 Quercus lobata HOM05D005713 ORTHO05D007751 8.9e-219 763.8 565 70.1
Prupe.8G105700 Prunus persica HOM05D005713 ORTHO05D007751 2.0e-218 762.7 570 70.5
Hma1.2p1_0066F.1_g036800 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 3.4e-218 761.9 530 72.1
Atru.chr5.2933 Acer truncatum HOM05D005713 ORTHO05D007751 1.3e-217 760.0 546 71.6
Sopen10g022910 Solanum pennellii HOM05D005713 ORTHO05D007751 1.7e-217 759.6 566 69.8
CSS0002132 Camellia sinensis var. sinensis HOM05D005713 ORTHO05D007751 2.2e-217 759.2 555 70.1
CANSAT25G3337 Cannabis sativa HOM05D005713 ORTHO05D007751 3.7e-217 758.4 522 73.6
Glyma.11G120800 Glycine max HOM05D005713 ORTHO05D007751 3.7e-217 758.4 558 68.1
Solyc10g051200.2 Solanum lycopersicum HOM05D005713 ORTHO05D007751 1.9e-216 756.1 566 69.4
PGSC0003DMG400005550 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.4e-216 755.7 564 69.7
MD05G1072000 Malus domestica HOM05D005713 ORTHO05D007751 4.1e-216 755.0 562 70.3
Ciclev10028141m.g Citrus clementina HOM05D005713 ORTHO05D007751 7.0e-216 754.2 534 71.5
COL.COLO4_32466 Corchorus olitorius HOM05D005713 ORTHO05D007751 7.0e-216 754.2 562 70.1
Oeu021892.1 Olea europaea HOM05D005713 ORTHO05D007751 7.0e-216 754.2 510 73.5
GSVIVG01031911001 Vitis vinifera HOM05D005713 ORTHO05D007751 7.0e-216 754.2 547 70.0
Peaxi162Scf00003g01334 Petunia axillaris HOM05D005713 ORTHO05D007751 1.2e-215 753.4 547 71.5
Manes.15G148000 Manihot esculenta HOM05D005713 ORTHO05D007751 6.0e-215 751.1 558 71.5
Thecc.02G121600 Theobroma cacao HOM05D005713 ORTHO05D007751 6.0e-215 751.1 555 69.7
Duzib052G0462 Durio zibethinus HOM05D005713 ORTHO05D007751 7.8e-215 750.7 562 70.3
Duzib132G0001 Durio zibethinus HOM05D005713 ORTHO05D007751 1.3e-214 750.0 555 71.2
Lj3g0005966 Lotus japonicus HOM05D005713 ORTHO05D007751 1.3e-214 750.0 545 69.4
Lj5C201T4 Lonicera japonica HOM05D005713 ORTHO05D007751 3.3e-213 745.3 557 70.2
Lsat_1_v5_gn_5_173381 Lactuca sativa HOM05D005713 ORTHO05D007751 4.3e-213 745.0 533 71.3
Nn1g05118 Nelumbo nucifera HOM05D005713 ORTHO05D007751 7.3e-213 744.2 510 72.9
Nitab4.5_0005152g0070 Nicotiana tabacum HOM05D005713 ORTHO05D007751 7.3e-213 744.2 561 68.3
CAN.G1.51 Capsicum annuum HOM05D005713 ORTHO05D007751 1.2e-212 743.4 557 68.2
MD10G1082600 Malus domestica HOM05D005713 ORTHO05D007751 1.2e-212 743.4 559 70.3
Phvul.011G047800 Phaseolus vulgaris HOM05D005713 ORTHO05D007751 1.2e-212 743.4 561 67.7
Rhsim05G0076900 Rhododendron simsii HOM05D005713 ORTHO05D007751 4.7e-212 741.5 566 68.7
arahy.Tifrunner.gnm1.ann1.6A0IVA Arachis hypogaea HOM05D005713 ORTHO05D007751 8.1e-212 740.7 562 67.6
VMungo1127G1847 Vigna mungo HOM05D005713 ORTHO05D007751 1.4e-211 740.0 553 66.9
arahy.Tifrunner.gnm1.ann1.A5JIR8 Arachis hypogaea HOM05D005713 ORTHO05D007751 2.3e-211 739.2 562 67.4
HanXRQChr01g0011551 Helianthus annuus HOM05D005713 ORTHO05D007751 4.0e-211 738.4 499 74.7
Potri.009G111692 Populus trichocarpa HOM05D005713 ORTHO05D007751 4.0e-211 738.4 541 69.1
RcHm_v2.0_Chr6g0262411 Rosa chinensis HOM05D005713 ORTHO05D007751 2.6e-210 735.7 557 69.1
CDE02G0286 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 4.4e-210 734.9 550 69.8
Cc02_g17920 Coffea canephora HOM05D005713 ORTHO05D007751 4.4e-210 734.9 553 67.6
Sabra09G0085300 Salix brachista HOM05D005713 ORTHO05D007751 5.8e-210 734.6 526 70.0
MSTRG.20107 Avicennia marina HOM05D005713 ORTHO05D007751 7.5e-210 734.2 518 70.3
ClCG02G005320 Citrullus lanatus HOM05D005713 ORTHO05D007751 7.5e-210 734.2 555 68.1
CsaV3_7G010230 Cucumis sativus L. HOM05D005713 ORTHO05D007751 9.8e-210 733.8 555 67.6
Potri.T124704 Populus trichocarpa HOM05D005713 ORTHO05D007751 1.7e-209 733.0 541 69.1
Ca_20845_v3 Cicer arietinum L. HOM05D005713 ORTHO05D007751 2.2e-209 732.6 534 69.3
FvH4_2g07950 Fragaria vesca HOM05D005713 ORTHO05D007751 3.7e-209 731.9 456 78.9
Dinv23558 Davidia involucrata HOM05D005713 ORTHO05D007751 3.2e-208 728.8 518 72.4
Aqoxy5G01712 Aquilegia oxysepala HOM05D005713 ORTHO05D007751 5.4e-208 728.0 504 73.2
ECA248G1707 Erigeron canadensis HOM05D005713 ORTHO05D007751 9.2e-208 727.2 483 75.6
Eucgr.G00476 Eucalyptus grandis HOM05D005713 ORTHO05D007751 9.2e-208 727.2 529 69.8
SalBow6G0484 Salvia bowleyana HOM05D005713 ORTHO05D007751 2.1e-207 726.1 502 72.9
Lalb_Chr01g0002751 Lupinus albus HOM05D005713 ORTHO05D007751 4.6e-207 724.9 561 66.1
PGR042G3676 Punica granatum HOM05D005713 ORTHO05D007751 4.6e-207 724.9 543 68.9
Sed0025253 Sechium edule HOM05D005713 ORTHO05D007751 2.3e-206 722.6 516 70.2
FAN24G3015 Fragaria x ananassa HOM05D005713 ORTHO05D007751 6.6e-206 721.1 470 76.8
TPR.G28056 Trifolium pratense HOM05D005713 ORTHO05D007751 2.5e-205 719.2 526 68.3
Lalb_Chr03g0025831 Lupinus albus HOM05D005713 ORTHO05D007751 3.3e-205 718.8 562 65.3
Psat7g185160 Pisum sativum HOM05D005713 ORTHO05D007751 7.3e-205 717.6 541 66.7
EL10Ac9g21763 Beta vulgaris HOM05D005713 ORTHO05D007751 1.2e-204 716.8 554 67.1
Medtr4g069080 Medicago truncatula HOM05D005713 ORTHO05D007751 1.2e-204 716.8 518 69.1
PSO700G0051 Papaver somniferum HOM05D005713 ORTHO05D007751 1.6e-204 716.5 507 71.2
Migut.B00270 Erythranthe guttata HOM05D005713 ORTHO05D007751 2.1e-204 716.1 557 67.1
PSO170G4048 Papaver somniferum HOM05D005713 ORTHO05D007751 1.4e-203 713.4 489 72.8
BcaB04g17346 Brassica carinata HOM05D005713 ORTHO05D007751 1.8e-203 713.0 444 78.2
MELO3C018406.2 Cucumis melo HOM05D005713 ORTHO05D007751 2.3e-203 712.6 556 66.7
Cpa.g.sc62.105 Carica papaya HOM05D005713 ORTHO05D007751 4.0e-203 711.8 547 68.0
Sp1g36220 Schrenkiella parvula HOM05D005713 ORTHO05D007751 6.8e-203 711.1 522 68.6
AT1G49380 Arabidopsis thaliana HOM05D005713 ORTHO05D007751 1.5e-202 709.9 529 68.4
Thhalv10011363m.g Eutrema salsugineum HOM05D005713 ORTHO05D007751 4.4e-202 708.4 521 68.9
Os03g0769600 Oryza sativa ssp. japonica HOM05D005713 ORTHO05D007751 1.7e-201 706.4 485 71.5
THA.LOC104800072 Tarenaya hassleriana HOM05D005713 ORTHO05D007751 4.9e-201 704.9 540 66.1
Zm00001eb058790 Zea mays HOM05D005713 ORTHO05D007751 8.4e-201 704.1 448 75.4
BraA08t32431Z Brassica rapa HOM05D005713 ORTHO05D007751 1.9e-200 703.0 500 70.6
A08p04030 Brassica napus HOM05D005713 ORTHO05D007751 5.4e-200 701.4 501 70.3
vmacro19441 Vaccinium macrocarpon HOM05D005713 ORTHO05D007751 7.1e-200 701.0 599 61.9
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 1.6e-199 699.9 513 69.4
AL1G56340 Arabidopsis lyrata HOM05D005713 ORTHO05D007751 1.6e-199 699.9 510 69.6
unitig_0.g67 Utricularia gibba HOM05D005713 ORTHO05D007751 2.1e-199 699.5 455 74.5
BcaC07g37058 Brassica carinata HOM05D005713 ORTHO05D007751 3.5e-199 698.7 505 69.7
C08p04230 Brassica napus HOM05D005713 ORTHO05D007751 4.6e-199 698.4 530 67.5
BolC8t47226H Brassica oleracea HOM05D005713 ORTHO05D007751 4.6e-199 698.4 505 69.7
FAN15G0466 Fragaria x ananassa HOM05D005713 ORTHO05D007751 4.6e-199 698.4 470 75.1
HPP92_018386 Vanilla planifolia HOM05D005713 ORTHO05D007751 7.8e-199 697.6 477 71.9
ATR0733G225 Amborella trichopoda HOM05D005713 ORTHO05D007751 1.0e-198 697.2 503 70.6
CARHR039390 Cardamine hirsuta HOM05D005713 ORTHO05D007751 6.6e-198 694.5 513 68.4
MBI16_g10988_MAGBIO Magnolia biondii HOM05D005713 ORTHO05D007751 1.1e-195 687.2 556 65.8
Carub.0001s3855 Capsella rubella HOM05D005713 ORTHO05D007751 8.9e-195 684.1 420 77.9
Hund06219 Selenicereus undatus HOM05D005713 ORTHO05D007751 1.2e-194 683.7 516 67.4
AUR62011361 Chenopodium quinoa HOM05D005713 ORTHO05D007751 1.5e-194 683.3 411 79.6
SGA_v2.0_scaffold58G20572 Striga asiatica HOM05D005713 ORTHO05D007751 3.4e-194 682.2 533 66.0
AUR62016700 Chenopodium quinoa HOM05D005713 ORTHO05D007751 2.7e-191 672.5 503 68.4
Hma1.2p1_0066F.1_g036810 Hydrangea macrophylla HOM05D005713 ORTHO05D007751 2.7e-175 619.4 373 81.2
SEGI_30892 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 6.7e-174 614.8 495 62.6
Haze_02421 Corylus avellana HOM05D005713 ORTHO05D007751 8.1e-172 607.8 555 60.0
QL11p041571 Quercus lobata HOM05D005713 ORTHO05D007751 6.5e-169 598.2 416 69.5
Actinidia17829 Actinidia chinensis HOM05D005713 ORTHO05D007751 2.5e-157 559.7 379 75.5
Mapoly0160s0024 Marchantia polymorpha HOM05D005713 ORTHO05D007751 1.1e-155 554.3 457 60.2
Pp3c5_6360 Physcomitrium patens HOM05D005713 ORTHO05D007751 2.7e-151 539.7 483 57.1
CDE01G0298 Ceratophyllum demersum HOM05D005713 ORTHO05D007751 5.9e-146 521.9 429 65.0
SMO172G0143 Selaginella moellendorffii HOM05D005713 ORTHO05D007751 1.3e-145 520.8 436 59.6
Sc18g0004720 Simmondsia chinensis HOM05D005713 ORTHO05D007751 1.9e-144 516.9 422 64.2
CBR_g46847 Chara braunii HOM05D005713 ORTHO05D007751 5.2e-134 482.3 430 55.6
CAN.G322.106 Capsicum annuum HOM05D005713 ORTHO05D007751 1.4e-110 404.4 549 46.8
AagrBONN_evm.TU.Sc2ySwM_228.2211 Anthoceros agrestis HOM05D005713 ORTHO05D007751 2.6e-109 400.2 436 48.4
Cre13.g575000 Chlamydomonas reinhardtii HOM05D005713 ORTHO05D007751 2.1e-103 380.6 521 44.0
PGSC0003DMG400025182 Solanum tuberosum HOM05D005713 ORTHO05D007751 2.1e-103 380.6 534 44.4
Solyc01g109330.3 Solanum lycopersicum HOM05D005713 ORTHO05D007751 4.7e-103 379.4 533 43.9
MCO11G018 Micromonas commoda HOM05D005713 ORTHO05D007751 1.4e-102 377.9 483 44.5
Sopen01g051520 Solanum pennellii HOM05D005713 ORTHO05D007751 8.9e-102 375.2 441 48.8
Nitab4.5_0004280g0110 Nicotiana tabacum HOM05D005713 ORTHO05D007751 5.8e-101 372.5 551 44.6
TAR381G0857 Trochodendron aralioides HOM05D005713 ORTHO05D007751 2.2e-100 370.5 255 71.4
Peaxi162Scf00016g00106 Petunia axillaris HOM05D005713 ORTHO05D007751 3.0e-97 360.1 521 44.3
Nitab4.5_0004287g0050 Nicotiana tabacum HOM05D005713 ORTHO05D007751 1.9e-96 357.5 546 43.4
PRCOL_00003752 Prasinoderma coloniale HOM05D005713 ORTHO05D007751 4.7e-79 299.7 481 38.5
QL07p047677 Quercus lobata HOM05D005713 ORTHO05D007751 4.0e-78 296.6 177 79.7
Glyma.12G045850 Glycine max HOM05D005713 ORTHO05D007751 3.6e-71 273.5 168 77.4
QL07p047674 Quercus lobata HOM05D005713 ORTHO05D021118 2.6e-45 187.6 220 53.2
Glyma.12G045901 Glycine max HOM05D005713 ORTHO05D007751 1.4e-43 181.8 155 61.3
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 1.5e-37 161.8 139 61.2
FAN19G2312 Fragaria x ananassa HOM05D005713 ORTHO05D007751 5.0e-36 156.8 137 56.9
Actinidia27913 Actinidia chinensis HOM05D005713 ORTHO05D007751 1.0e-28 132.5 74 85.1
Lj5g0025918 Lotus japonicus HOM05D005713 ORTHO05D236034 8.8e-25 119.4 105 55.2
SEGI_20066 Sequoiadendron giganteum HOM05D005713 ORTHO05D007751 1.3e-23 115.5 125 45.6
FvH4_1g29190 Fragaria vesca HOM05D005713 ORTHO05D007751 4.1e-22 110.5 105 56.2
FAN20G0809 Fragaria x ananassa HOM05D005713 ORTHO05D007751 1.4e-17 95.5 58 77.6
Hma1.2p1_0066F.1_g036790 Hydrangea macrophylla HOM05D005713 ORTHO05D021118 1.4e-14 85.5 139 44.6
Actinidia27912 Actinidia chinensis HOM05D005713 ORTHO05D021118 2.5e-11 74.7 153 39.2
PGSC0003DMG400003326 Solanum tuberosum HOM05D005713 ORTHO05D021118 4.2e-11 73.9 134 38.1
PGSC0003DMG400019020 Solanum tuberosum HOM05D005713 ORTHO05D021118 8.0e-10 69.7 134 38.1
QL11p041469 Quercus lobata HOM05D005713 ORTHO05D338114 6.3e-07 60.1 38 73.7
QL11p041915 Quercus lobata HOM05D005713 ORTHO05D021118 4.1e-06 57.4 149 39.6


User provided reference genes

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