Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022029 Daucus carota HOM05D002458 ORTHO05D002603 3.6e-94 348.2 170 100.0
Dinv23616 Davidia involucrata HOM05D002458 ORTHO05D002603 5.2e-29 131.7 149 55.0
Peaxi162Scf00003g02325 Petunia axillaris HOM05D002458 ORTHO05D002603 8.6e-24 114.4 147 49.7
QL11p036042 Quercus lobata HOM05D002458 ORTHO05D002603 8.1e-22 107.8 152 45.4
Oeu013702.1 Olea europaea HOM05D002458 ORTHO05D002603 1.4e-21 107.1 140 48.6
Potri.004G141600 Populus trichocarpa HOM05D002458 ORTHO05D002603 2.4e-21 106.3 143 42.7
Lsat_1_v5_gn_7_87020 Lactuca sativa HOM05D002458 ORTHO05D002603 7.6e-20 101.3 139 46.8
Nitab4.5_0007480g0020 Nicotiana tabacum HOM05D002458 ORTHO05D002603 9.9e-20 100.9 143 45.5
Nitab4.5_0002543g0060 Nicotiana tabacum HOM05D002458 ORTHO05D002603 1.3e-19 100.5 143 45.5
Potri.009G102800 Populus trichocarpa HOM05D002458 ORTHO05D002603 1.3e-19 100.5 144 47.2
Dinv42151 Davidia involucrata HOM05D002458 ORTHO05D002603 4.9e-19 98.6 130 51.5
Hma1.2p1_0370F.1_g137860 Hydrangea macrophylla HOM05D002458 ORTHO05D002603 8.4e-19 97.8 131 43.5
HanXRQChr04g0128221 Helianthus annuus HOM05D002458 ORTHO05D002603 1.1e-18 97.4 156 43.6
TAR628G0915 Trochodendron aralioides HOM05D002458 ORTHO05D002603 1.1e-18 97.4 149 43.0
Sabra04G0093500 Salix brachista HOM05D002458 ORTHO05D002603 1.4e-18 97.1 147 42.9
unitig_61.g26001 Utricularia gibba HOM05D002458 ORTHO05D002603 1.4e-18 97.1 153 43.1
MSTRG.20151 Avicennia marina HOM05D002458 ORTHO05D002603 3.2e-18 95.9 130 47.7
Migut.B00340 Erythranthe guttata HOM05D002458 ORTHO05D002603 5.4e-18 95.1 135 46.7
Nn1g04890 Nelumbo nucifera HOM05D002458 ORTHO05D002603 5.4e-18 95.1 146 42.5
CiPaw.01G019100 Carya illinoinensis HOM05D002458 ORTHO05D002603 1.6e-17 93.6 145 44.8
SalBow3G3738 Salvia bowleyana HOM05D002458 ORTHO05D002603 2.1e-17 93.2 141 45.4
HanXRQChr10g0288991 Helianthus annuus HOM05D002458 ORTHO05D002603 3.5e-17 92.4 147 45.6
Nn5g30245 Nelumbo nucifera HOM05D002458 ORTHO05D002603 4.6e-17 92.0 131 47.3
CiPaw.05G051800 Carya illinoinensis HOM05D002458 ORTHO05D002603 6.0e-17 91.7 125 47.2
Sabra07G0037800 Salix brachista HOM05D002458 ORTHO05D002603 7.8e-17 91.3 142 42.3
Haze_15416 Corylus avellana HOM05D002458 ORTHO05D002603 1.0e-16 90.9 137 43.8
Cc02_g18710 Coffea canephora HOM05D002458 ORTHO05D002603 1.7e-16 90.1 123 50.4
Lsat_1_v5_gn_5_112820 Lactuca sativa HOM05D002458 ORTHO05D002603 2.3e-16 89.7 151 42.4
Potri.007G042600 Populus trichocarpa HOM05D002458 ORTHO05D002603 2.3e-16 89.7 139 42.4
GSVIVG01022142001 Vitis vinifera HOM05D002458 ORTHO05D002603 2.3e-16 89.7 131 43.5
HanXRQChr16g0515091 Helianthus annuus HOM05D002458 ORTHO05D002603 3.0e-16 89.4 118 46.6
Thecc.01G054400 Theobroma cacao HOM05D002458 ORTHO05D002603 3.9e-16 89.0 147 41.5
Prupe.8G123500 Prunus persica HOM05D002458 ORTHO05D002603 5.1e-16 88.6 128 46.9
Atru.chr5.2728 Acer truncatum HOM05D002458 ORTHO05D002603 6.6e-16 88.2 141 43.3
Cfa005475 Carpinus fangiana HOM05D002458 ORTHO05D002603 8.7e-16 87.8 128 46.9
Haze_01829 Corylus avellana HOM05D002458 ORTHO05D002603 1.1e-15 87.4 128 46.1
MBI06_g24647_MAGBIO Magnolia biondii HOM05D002458 ORTHO05D002603 1.1e-15 87.4 156 41.0
CSS0027699 Camellia sinensis var. sinensis HOM05D002458 ORTHO05D002603 1.5e-15 87.0 131 45.8
Duzib187G0864 Durio zibethinus HOM05D002458 ORTHO05D002603 2.5e-15 86.3 147 40.1
Gohir.D12G068500 Gossypium hirsutum HOM05D002458 ORTHO05D002603 2.5e-15 86.3 144 42.4
Manes.10G065400 Manihot esculenta HOM05D002458 ORTHO05D002603 2.5e-15 86.3 124 46.0
MD05G1079600 Malus domestica HOM05D002458 ORTHO05D002603 3.3e-15 85.9 131 46.6
Gorai.008G074900 Gossypium raimondii HOM05D002458 ORTHO05D002603 5.6e-15 85.1 142 40.1
Manes.12G102900 Manihot esculenta HOM05D002458 ORTHO05D002603 1.3e-14 84.0 138 43.5
Gohir.A12G070600 Gossypium hirsutum HOM05D002458 ORTHO05D002603 1.6e-14 83.6 144 41.0
SalBow6G2746 Salvia bowleyana HOM05D002458 ORTHO05D002603 1.6e-14 83.6 150 45.3
Manes.13G127400 Manihot esculenta HOM05D002458 ORTHO05D002603 2.1e-14 83.2 148 39.9
Thecc.02G099600 Theobroma cacao HOM05D002458 ORTHO05D002603 2.1e-14 83.2 143 38.5
TAR376G0738 Trochodendron aralioides HOM05D002458 ORTHO05D002603 2.8e-14 82.8 152 40.8
COL.COLO4_32666 Corchorus olitorius HOM05D002458 ORTHO05D002603 3.6e-14 82.4 130 44.6
Actinidia00445 Actinidia chinensis HOM05D002458 ORTHO05D002603 4.8e-14 82.0 141 43.3
MD10G1093900 Malus domestica HOM05D002458 ORTHO05D002603 1.1e-13 80.9 131 44.3
RcHm_v2.0_Chr6g0256981 Rosa chinensis HOM05D002458 ORTHO05D002603 1.4e-13 80.5 128 45.3
Gohir.A11G191400 Gossypium hirsutum HOM05D002458 ORTHO05D002603 1.8e-13 80.1 135 41.5
Sabra09G0078700 Salix brachista HOM05D002458 ORTHO05D002603 3.1e-13 79.3 129 42.6
Solyc01g108170.3 Solanum lycopersicum HOM05D002458 ORTHO05D002603 3.1e-13 79.3 120 45.8
CSS0005083 Camellia sinensis var. sinensis HOM05D002458 ORTHO05D002603 4.0e-13 79.0 144 41.0
Peaxi162Scf00450g00733 Petunia axillaris HOM05D002458 ORTHO05D002603 4.0e-13 79.0 144 42.4
TWI79G1260 Tripterygium wilfordii HOM05D002458 ORTHO05D002603 4.0e-13 79.0 121 44.6
FvH4_2g06210 Fragaria vesca HOM05D002458 ORTHO05D002603 6.9e-13 78.2 129 44.2
FAN24G3116 Fragaria x ananassa HOM05D002458 ORTHO05D002603 6.9e-13 78.2 129 44.2
Sed0018653 Sechium edule HOM05D002458 ORTHO05D002603 6.9e-13 78.2 125 40.0
CAN.G165.22 Capsicum annuum HOM05D002458 ORTHO05D002603 9.0e-13 77.8 157 36.9
Duzib248G1687 Durio zibethinus HOM05D002458 ORTHO05D002603 9.0e-13 77.8 146 38.4
Gorai.007G212200 Gossypium raimondii HOM05D002458 ORTHO05D002603 9.0e-13 77.8 135 40.7
Ciclev10029915m.g Citrus clementina HOM05D002458 ORTHO05D002603 1.2e-12 77.4 118 41.5
FAN15G1604 Fragaria x ananassa HOM05D002458 ORTHO05D002603 1.2e-12 77.4 129 44.2
PSO541G0955 Papaver somniferum HOM05D002458 ORTHO05D002603 1.2e-12 77.4 151 38.4
PSO675G2615 Papaver somniferum HOM05D002458 ORTHO05D002603 1.2e-12 77.4 151 37.7
Nitab4.5_0005062g0030 Nicotiana tabacum HOM05D002458 ORTHO05D002603 2.0e-12 76.6 137 39.4
Nitab4.5_0023509g0010 Nicotiana tabacum HOM05D002458 ORTHO05D002603 2.0e-12 76.6 129 41.9
RcHm_v2.0_Chr2g0105301 Rosa chinensis HOM05D002458 ORTHO05D002603 2.0e-12 76.6 146 43.8
EL10Ac6g15758 Beta vulgaris HOM05D002458 ORTHO05D002603 2.6e-12 76.3 144 38.9
CSS0050202 Camellia sinensis var. sinensis HOM05D002458 ORTHO05D002603 3.4e-12 75.9 132 43.2
FAN20G0269 Fragaria x ananassa HOM05D002458 ORTHO05D002603 3.4e-12 75.9 129 43.4
Nitab4.5_0003503g0060 Nicotiana tabacum HOM05D002458 ORTHO05D002603 3.4e-12 75.9 117 45.3
Rhsim05G0083500 Rhododendron simsii HOM05D002458 ORTHO05D002603 5.8e-12 75.1 135 41.5
FAN27G1641 Fragaria x ananassa HOM05D002458 ORTHO05D002603 7.6e-12 74.7 129 43.4
TAR381G1245 Trochodendron aralioides HOM05D002458 ORTHO05D002603 7.6e-12 74.7 99 45.5
ECA234G2959 Erigeron canadensis HOM05D002458 ORTHO05D002603 9.9e-12 74.3 135 40.0
CiPaw.06G143400 Carya illinoinensis HOM05D002458 ORTHO05D002603 1.7e-11 73.6 119 42.9
FAN26G2469 Fragaria x ananassa HOM05D002458 ORTHO05D002603 1.7e-11 73.6 144 41.7
PGR142G0732 Punica granatum HOM05D002458 ORTHO05D002603 1.7e-11 73.6 115 40.9
COL.COLO4_11399 Corchorus olitorius HOM05D002458 ORTHO05D002603 2.2e-11 73.2 143 37.8
FAN19G0517 Fragaria x ananassa HOM05D002458 ORTHO05D002603 2.2e-11 73.2 144 41.7
FAN23G1767 Fragaria x ananassa HOM05D002458 ORTHO05D002603 2.2e-11 73.2 144 41.7
FAN28G2673 Fragaria x ananassa HOM05D002458 ORTHO05D002603 2.2e-11 73.2 144 41.7
Glyma.07G211700 Glycine max HOM05D002458 ORTHO05D002603 2.2e-11 73.2 127 40.2
Lj2g0015041 Lotus japonicus HOM05D002458 ORTHO05D002603 2.2e-11 73.2 139 41.7
Ciclev10026611m.g Citrus clementina HOM05D002458 ORTHO05D002603 3.8e-11 72.4 144 38.9
FvH4_1g15910 Fragaria vesca HOM05D002458 ORTHO05D002603 6.4e-11 71.6 144 41.0
Lj4g0013446 Lotus japonicus HOM05D002458 ORTHO05D002603 6.4e-11 71.6 146 38.4
Migut.N01190 Erythranthe guttata HOM05D002458 ORTHO05D002603 8.4e-11 71.2 147 38.8
HanXRQChr16g0497601 Helianthus annuus HOM05D002458 ORTHO05D002603 8.4e-11 71.2 142 38.7
TWI09G0929 Tripterygium wilfordii HOM05D002458 ORTHO05D002603 8.4e-11 71.2 146 39.7
Phvul.003G293000 Phaseolus vulgaris HOM05D002458 ORTHO05D002603 1.1e-10 70.9 101 44.6
TPR.G30834 Trifolium pratense HOM05D002458 ORTHO05D002603 1.1e-10 70.9 100 44.0
Glyma.02G133300 Glycine max HOM05D002458 ORTHO05D002603 1.4e-10 70.5 105 43.8
Hma1.2p1_0461F.1_g157900 Hydrangea macrophylla HOM05D002458 ORTHO05D002603 1.9e-10 70.1 148 34.5
Lalb_Chr16g0384661 Lupinus albus HOM05D002458 ORTHO05D002603 1.9e-10 70.1 96 43.8
Psat7g124200 Pisum sativum HOM05D002458 ORTHO05D002603 1.9e-10 70.1 100 45.0
Aqoxy5G01250 Aquilegia oxysepala HOM05D002458 ORTHO05D002603 4.2e-10 68.9 145 33.1
CsaV3_3G018550 Cucumis sativus L. HOM05D002458 ORTHO05D002603 4.2e-10 68.9 116 40.5
Lj4g0009220 Lotus japonicus HOM05D002458 ORTHO05D002603 4.2e-10 68.9 107 42.1
MD02G1170900 Malus domestica HOM05D002458 ORTHO05D002603 4.2e-10 68.9 138 38.4
Peaxi162Scf00016g01824 Petunia axillaris HOM05D002458 ORTHO05D002603 4.2e-10 68.9 88 48.9
CSS0037574 Camellia sinensis var. sinensis HOM05D002458 ORTHO05D002603 5.4e-10 68.6 151 39.1
Nitab4.5_0000728g0040 Nicotiana tabacum HOM05D002458 ORTHO05D002603 5.4e-10 68.6 152 35.5
PGSC0003DMG400025476 Solanum tuberosum HOM05D002458 ORTHO05D002603 7.1e-10 68.2 146 37.7
Duzib147G0558 Durio zibethinus HOM05D002458 ORTHO05D002603 9.3e-10 67.8 129 39.5
Duzib264G0584 Durio zibethinus HOM05D002458 ORTHO05D002603 9.3e-10 67.8 149 34.2
MELO3C019512.2 Cucumis melo HOM05D002458 ORTHO05D002603 1.2e-09 67.4 116 40.5
PSO170G0732 Papaver somniferum HOM05D002458 ORTHO05D002603 1.2e-09 67.4 168 35.1
MD15G1282400 Malus domestica HOM05D002458 ORTHO05D002603 1.6e-09 67.0 140 38.6
Medtr4g086340 Medicago truncatula HOM05D002458 ORTHO05D002603 1.6e-09 67.0 100 42.0
Lalb_Chr05g0226601 Lupinus albus HOM05D002458 ORTHO05D002603 3.5e-09 65.9 113 41.6
Psat4g087040 Pisum sativum HOM05D002458 ORTHO05D002603 3.5e-09 65.9 104 39.4
Lalb_Chr09g0333771 Lupinus albus HOM05D002458 ORTHO05D002603 4.6e-09 65.5 146 37.7
PGSC0003DMG400025891 Solanum tuberosum HOM05D002458 ORTHO05D002603 4.6e-09 65.5 103 44.7
Duzib052G0113 Durio zibethinus HOM05D002458 ORTHO05D002603 6.0e-09 65.1 149 36.9
Sopen02g015150 Solanum pennellii HOM05D002458 ORTHO05D002603 6.0e-09 65.1 127 37.8
Ca_18677_v3 Cicer arietinum L. HOM05D002458 ORTHO05D002603 7.9e-09 64.7 100 42.0
FAN04G0719 Fragaria x ananassa HOM05D002458 ORTHO05D002603 1.0e-08 64.3 119 42.9
FAN11G1855 Fragaria x ananassa HOM05D002458 ORTHO05D002603 1.0e-08 64.3 119 42.9
FAN12G1655 Fragaria x ananassa HOM05D002458 ORTHO05D002603 1.0e-08 64.3 119 42.9
FAN16G2042 Fragaria x ananassa HOM05D002458 ORTHO05D002603 1.0e-08 64.3 119 42.9
PSO210G6961 Papaver somniferum HOM05D002458 ORTHO05D002603 1.0e-08 64.3 173 32.9
Solyc02g065020.2 Solanum lycopersicum HOM05D002458 ORTHO05D002603 1.3e-08 63.9 131 40.5
Oeu004830.1 Olea europaea HOM05D002458 ORTHO05D002603 1.8e-08 63.5 129 36.4
Sopen01g050400 Solanum pennellii HOM05D002458 ORTHO05D002603 2.3e-08 63.2 103 43.7
HPP92_016727 Vanilla planifolia HOM05D002458 ORTHO05D002603 2.3e-08 63.2 141 35.5
CsaV3_6G043200 Cucumis sativus L. HOM05D002458 ORTHO05D002603 3.0e-08 62.8 107 43.0
CANSAT01G1685 Cannabis sativa HOM05D002458 ORTHO05D002603 3.9e-08 62.4 147 34.7
Psat2g166160 Pisum sativum HOM05D002458 ORTHO05D002603 3.9e-08 62.4 144 36.8
PGSC0003DMG400015780 Solanum tuberosum HOM05D002458 ORTHO05D002603 3.9e-08 62.4 133 37.6
AL8G44650 Arabidopsis lyrata HOM05D002458 ORTHO05D002603 5.1e-08 62.0 112 42.0
Ah.02g124270 Amaranthus hybridus HOM05D002458 ORTHO05D002603 6.7e-08 61.6 139 36.7
Thhalv10004991m.g Eutrema salsugineum HOM05D002458 ORTHO05D002603 6.7e-08 61.6 114 40.4
Medtr5g017580 Medicago truncatula HOM05D002458 ORTHO05D002603 6.7e-08 61.6 137 38.0
Prupe.7G134700 Prunus persica HOM05D002458 ORTHO05D002603 8.7e-08 61.2 59 54.2
TWI75G1467 Tripterygium wilfordii HOM05D002458 ORTHO05D002603 8.7e-08 61.2 73 46.6
AT5G66800 Arabidopsis thaliana HOM05D002458 ORTHO05D002603 1.1e-07 60.8 115 40.9
TPR.G21290 Trifolium pratense HOM05D002458 ORTHO05D002603 1.1e-07 60.8 122 38.5
AUR62003867 Chenopodium quinoa HOM05D002458 ORTHO05D002603 1.9e-07 60.1 145 38.6
SalBow1G7029 Salvia bowleyana HOM05D002458 ORTHO05D002603 2.5e-07 59.7 128 35.9
Aa31LG1G15350 Aethionema arabicum HOM05D002458 ORTHO05D002603 3.3e-07 59.3 115 41.7
Ca_19502_v3 Cicer arietinum L. HOM05D002458 ORTHO05D002603 4.3e-07 58.9 68 45.6
Eucgr.H01652 Eucalyptus grandis HOM05D002458 ORTHO05D002603 4.3e-07 58.9 131 38.2
PGR042G0791 Punica granatum HOM05D002458 ORTHO05D002603 4.3e-07 58.9 121 36.4
Eucgr.H02010 Eucalyptus grandis HOM05D002458 ORTHO05D002603 5.6e-07 58.5 130 36.9
Eucgr.I00936 Eucalyptus grandis HOM05D002458 ORTHO05D002603 5.6e-07 58.5 144 31.9
Gohir.D02G210400 Gossypium hirsutum HOM05D002458 ORTHO05D002603 5.6e-07 58.5 116 41.4
Gorai.005G238400 Gossypium raimondii HOM05D002458 ORTHO05D002603 5.6e-07 58.5 116 41.4
Phvul.003G244300 Phaseolus vulgaris HOM05D002458 ORTHO05D002603 5.6e-07 58.5 63 52.4
VMungo0251G2437 Vigna mungo HOM05D002458 ORTHO05D002603 5.6e-07 58.5 63 52.4
Carub.0008s2771 Capsella rubella HOM05D002458 ORTHO05D002603 9.6e-07 57.8 116 42.2
Gohir.A03G189800 Gossypium hirsutum HOM05D002458 ORTHO05D002603 9.6e-07 57.8 114 40.4
AUR62001940 Chenopodium quinoa HOM05D002458 ORTHO05D002603 1.3e-06 57.4 120 38.3
CARHR094610 Cardamine hirsuta HOM05D002458 ORTHO05D002603 1.6e-06 57.0 112 36.6
Thhalv10027139m.g Eutrema salsugineum HOM05D002458 ORTHO05D002603 1.6e-06 57.0 119 36.1
HanXRQChr07g0191581 Helianthus annuus HOM05D002458 ORTHO05D002603 2.1e-06 56.6 160 34.4
A07p17130 Brassica napus HOM05D002458 ORTHO05D002603 2.8e-06 56.2 112 36.6
BraA07t29439Z Brassica rapa HOM05D002458 ORTHO05D002603 2.8e-06 56.2 112 36.6
MELO3C007556.2 Cucumis melo HOM05D002458 ORTHO05D002603 2.8e-06 56.2 109 40.4
BcaC06g34747 Brassica carinata HOM05D002458 ORTHO05D002603 3.7e-06 55.8 112 37.5
BolC7t43029H Brassica oleracea HOM05D002458 ORTHO05D002603 3.7e-06 55.8 112 37.5
Sed0017415 Sechium edule HOM05D002458 ORTHO05D002603 3.7e-06 55.8 136 38.2
C07p24980 Brassica napus HOM05D002458 ORTHO05D002603 4.8e-06 55.5 112 36.6
ECA236G4820 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-06 55.5 105 37.1
Hma1.2p1_0200F.1_g085920 Hydrangea macrophylla HOM05D002458 ORTHO05D002603 6.2e-06 55.1 106 38.7
Lalb_Chr09g0323131 Lupinus albus HOM05D002458 ORTHO05D002603 6.2e-06 55.1 89 42.7
QL06p041771 Quercus lobata HOM05D002458 ORTHO05D002603 6.2e-06 55.1 56 50.0
VMungo1215G2639 Vigna mungo HOM05D002458 ORTHO05D002603 6.2e-06 55.1 155 33.5
BcaB02g09989 Brassica carinata HOM05D002458 ORTHO05D002603 8.1e-06 54.7 115 36.5
Carub.0003s1903 Capsella rubella HOM05D002458 ORTHO05D002603 8.1e-06 54.7 113 35.4
Sp3g17270 Schrenkiella parvula HOM05D002458 ORTHO05D002603 8.1e-06 54.7 117 32.5


User provided reference genes

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