Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 4.4e-71 271.2 134 100.0
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 1.2e-33 146.7 141 58.2
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 2.9e-30 135.6 146 56.2
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 2.4e-29 132.5 136 55.1
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 4.1e-29 131.7 136 58.1
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 9.2e-29 130.6 139 56.1
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 1.3e-27 126.7 137 56.2
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 2.3e-27 125.9 130 53.8
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 8.6e-27 124.0 135 54.8
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.9e-26 122.9 139 56.8
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 1.2e-25 120.2 137 50.4
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 1.2e-25 120.2 139 54.0
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 1.6e-25 119.8 144 50.7
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 4.7e-25 118.2 143 49.7
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 8.1e-25 117.5 138 52.9
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 1.8e-24 116.3 140 50.7
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 2.3e-24 115.9 141 53.2
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 4.0e-24 115.2 130 53.1
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 3.4e-23 112.1 139 46.8
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 4.4e-23 111.7 131 54.2
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 4.4e-23 111.7 139 51.1
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 5.8e-23 111.3 123 55.3
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 5.8e-23 111.3 123 55.3
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 1.3e-22 110.2 139 48.2
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 2.2e-22 109.4 123 54.5
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 2.2e-22 109.4 127 49.6
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 4.9e-22 108.2 124 50.0
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 6.4e-22 107.8 135 46.7
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 6.4e-22 107.8 135 53.3
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 1.1e-21 107.1 138 47.1
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 1.9e-21 106.3 137 47.4
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 3.2e-21 105.5 137 46.0
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 3.2e-21 105.5 121 52.1
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 3.2e-21 105.5 131 50.4
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 3.2e-21 105.5 148 50.0
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 7.1e-21 104.4 131 51.1
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 9.2e-21 104.0 137 46.0
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 9.2e-21 104.0 147 45.6
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 1.2e-20 103.6 130 50.0
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 1.6e-20 103.2 136 45.6
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.1e-20 102.8 138 49.3
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 3.5e-20 102.1 103 54.4
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 4.6e-20 101.7 134 47.8
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 6.0e-20 101.3 133 49.6
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 6.0e-20 101.3 139 47.5
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 7.8e-20 100.9 141 48.2
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 1.7e-19 99.8 131 48.9
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.3e-19 99.4 141 45.4
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 2.3e-19 99.4 141 45.4
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 3.9e-19 98.6 135 46.7
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 8.6e-19 97.4 134 45.5
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 1.1e-18 97.1 141 40.4
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 1.1e-18 97.1 140 47.1
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 1.1e-18 97.1 130 44.6
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 4.3e-18 95.1 138 44.2
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 5.6e-18 94.7 131 45.8
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 9.5e-18 94.0 139 43.9
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 1.2e-17 93.6 138 43.5
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 2.8e-17 92.4 132 47.0
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 2.8e-17 92.4 76 61.8
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 2.8e-17 92.4 76 61.8
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 6.2e-17 91.3 135 43.7
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 6.2e-17 91.3 137 43.1
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 6.2e-17 91.3 110 45.5
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 6.2e-17 91.3 121 46.3
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 1.1e-16 90.5 137 43.1
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.8e-16 89.7 76 60.5
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 6.8e-16 87.8 135 44.4
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 1.2e-15 87.0 148 41.2
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 1.5e-15 86.7 126 43.7
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 2.0e-15 86.3 135 44.4
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 2.0e-15 86.3 138 41.3
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 2.0e-15 86.3 149 42.3
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 2.6e-15 85.9 147 40.8
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 3.4e-15 85.5 117 43.6
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 3.4e-15 85.5 126 42.9
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 3.4e-15 85.5 122 43.4
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 4.4e-15 85.1 125 44.0
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 4.4e-15 85.1 103 45.6
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 4.4e-15 85.1 118 45.8
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 5.8e-15 84.7 126 44.4
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 5.8e-15 84.7 145 38.6
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 7.6e-15 84.3 126 42.9
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 7.6e-15 84.3 121 46.3
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 9.9e-15 84.0 148 41.2
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 1.3e-14 83.6 118 40.7
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.9e-14 82.4 57 68.4
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 8.4e-14 80.9 115 39.1
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.1e-13 80.5 119 40.3
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 2.1e-12 76.3 115 37.4
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 2.7e-12 75.9 117 41.9
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 1.0e-11 73.9 111 40.5
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 1.7e-11 73.2 124 41.1
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 1.7e-11 73.2 124 41.1
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 1.7e-11 73.2 120 39.2
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 1.7e-11 73.2 115 40.9
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 2.3e-11 72.8 109 41.3
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 3.9e-11 72.0 112 42.0
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 5.6e-10 68.2 44 59.1
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 7.3e-10 67.8 95 44.2
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 6.2e-09 64.7 57 52.6
SEGI_30369 Sequoiadendron giganteum HOM05D007022 ORTHO05D014789 2.6e-07 59.3 49 55.1
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 3.4e-07 58.9 41 61.0
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 3.4e-07 58.9 136 33.8


User provided reference genes

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