Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021982 Daucus carota HOM05D003735 ORTHO05D004550 2.9e-246 854.7 420 100.0
Dinv15769 Davidia involucrata HOM05D003735 ORTHO05D004550 2.6e-202 708.8 418 81.3
Lj9A323T50 Lonicera japonica HOM05D003735 ORTHO05D004550 4.4e-202 708.0 420 81.4
Actinidia00406 Actinidia chinensis HOM05D003735 ORTHO05D004550 2.4e-200 702.2 420 81.0
CSS0013486 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 1.6e-199 699.5 420 80.7
Rhsim11G0159300 Rhododendron simsii HOM05D003735 ORTHO05D004550 2.0e-199 699.1 418 80.6
Rhsim11G0159400 Rhododendron simsii HOM05D003735 ORTHO05D004550 3.8e-198 694.9 418 79.7
GSVIVG01037915001 Vitis vinifera HOM05D003735 ORTHO05D004550 1.1e-197 693.3 420 80.5
Dinv42198 Davidia involucrata HOM05D003735 ORTHO05D004550 1.2e-196 689.9 419 79.7
Cfa004592 Carpinus fangiana HOM05D003735 ORTHO05D004550 3.0e-195 685.3 420 79.3
SalBow3G2544 Salvia bowleyana HOM05D003735 ORTHO05D004550 5.2e-195 684.5 415 79.0
vmacro01999 Vaccinium macrocarpon HOM05D003735 ORTHO05D004550 6.8e-195 684.1 437 76.7
Manes.07G071116 Manihot esculenta HOM05D003735 ORTHO05D004550 1.5e-194 682.9 414 78.3
Potri.009G094800 Populus trichocarpa HOM05D003735 ORTHO05D004550 3.4e-194 681.8 412 78.9
Eucgr.I01098 Eucalyptus grandis HOM05D003735 ORTHO05D004550 4.4e-194 681.4 418 77.3
Manes.07G071100 Manihot esculenta HOM05D003735 ORTHO05D004550 4.4e-194 681.4 414 78.3
CiPaw.05G012200 Carya illinoinensis HOM05D003735 ORTHO05D004550 7.5e-194 680.6 416 78.4
GSVIVG01037913001 Vitis vinifera HOM05D003735 ORTHO05D004550 7.5e-194 680.6 420 78.8
MSTRG.5338 Avicennia marina HOM05D003735 ORTHO05D004550 9.8e-194 680.2 415 77.8
COL.COLO4_32583 Corchorus olitorius HOM05D003735 ORTHO05D004550 9.8e-194 680.2 420 78.8
Ciclev10028518m.g Citrus clementina HOM05D003735 ORTHO05D004550 2.8e-193 678.7 420 77.9
Migut.N01162 Erythranthe guttata HOM05D003735 ORTHO05D004550 2.8e-193 678.7 415 78.6
Peaxi162Scf00016g02426 Petunia axillaris HOM05D003735 ORTHO05D004550 8.3e-193 677.2 417 79.1
arahy.Tifrunner.gnm1.ann1.28YLK9 Arachis hypogaea HOM05D003735 ORTHO05D004550 1.1e-192 676.8 420 77.4
QL11p033367 Quercus lobata HOM05D003735 ORTHO05D004550 1.1e-192 676.8 419 77.6
Hma1.2p1_0796F.1_g219280 Hydrangea macrophylla HOM05D003735 ORTHO05D004550 1.4e-192 676.4 420 77.9
CAN.G606.4 Capsicum annuum HOM05D003735 ORTHO05D004550 2.4e-192 675.6 418 78.0
Duzib132G0856 Durio zibethinus HOM05D003735 ORTHO05D004550 3.1e-192 675.2 442 74.7
Potri.001G299700 Populus trichocarpa HOM05D003735 ORTHO05D004550 3.1e-192 675.2 416 77.9
arahy.Tifrunner.gnm1.ann1.SBY3PD Arachis hypogaea HOM05D003735 ORTHO05D004550 4.1e-192 674.9 420 77.1
Haze_10183 Corylus avellana HOM05D003735 ORTHO05D004550 4.1e-192 674.9 419 77.3
Lj5g0001181 Lotus japonicus HOM05D003735 ORTHO05D004550 5.4e-192 674.5 416 76.7
Nitab4.5_0011634g0020 Nicotiana tabacum HOM05D003735 ORTHO05D004550 7.0e-192 674.1 432 75.9
Thecc.02G109200 Theobroma cacao HOM05D003735 ORTHO05D004550 1.6e-191 672.9 414 78.3
CiPaw.05G012300 Carya illinoinensis HOM05D003735 ORTHO05D004550 2.0e-191 672.5 416 77.4
Gohir.A12G021500 Gossypium hirsutum HOM05D003735 ORTHO05D004550 2.7e-191 672.2 415 78.1
TPR.G3239 Trifolium pratense HOM05D003735 ORTHO05D004550 2.7e-191 672.2 412 77.2
Atru.chr5.2510 Acer truncatum HOM05D003735 ORTHO05D004550 3.5e-191 671.8 416 77.4
Cc02_g19320 Coffea canephora HOM05D003735 ORTHO05D004550 4.5e-191 671.4 416 77.4
Duzib248G1182 Durio zibethinus HOM05D003735 ORTHO05D004550 5.9e-191 671.0 420 77.1
Sopen01g049750 Solanum pennellii HOM05D003735 ORTHO05D004550 5.9e-191 671.0 416 76.7
Glyma.10G261300 Glycine max HOM05D003735 ORTHO05D004550 1.0e-190 670.2 416 76.4
Sabra09G0073100 Salix brachista HOM05D003735 ORTHO05D004550 1.0e-190 670.2 416 77.4
CANSAT25G2742 Cannabis sativa HOM05D003735 ORTHO05D004550 1.3e-190 669.8 415 76.9
Ca_11068_v3 Cicer arietinum L. HOM05D003735 ORTHO05D004550 1.3e-190 669.8 416 76.2
Medtr1g107235 Medicago truncatula HOM05D003735 ORTHO05D004550 1.7e-190 669.5 412 77.2
Prupe.8G136000 Prunus persica HOM05D003735 ORTHO05D004550 2.2e-190 669.1 416 77.4
Nn5g30431 Nelumbo nucifera HOM05D003735 ORTHO05D004550 2.9e-190 668.7 416 76.0
Sabra09G0072900 Salix brachista HOM05D003735 ORTHO05D004550 6.5e-190 667.5 412 77.7
Haze_10190 Corylus avellana HOM05D003735 ORTHO05D004550 8.5e-190 667.2 436 75.0
Glyma.20G129700 Glycine max HOM05D003735 ORTHO05D004550 1.1e-189 666.8 416 76.7
Gohir.D12G022000 Gossypium hirsutum HOM05D003735 ORTHO05D004550 1.1e-189 666.8 420 76.7
PGSC0003DMG400025861 Solanum tuberosum HOM05D003735 ORTHO05D004550 1.1e-189 666.8 416 76.9
Manes.07G071000 Manihot esculenta HOM05D003735 ORTHO05D004550 3.2e-189 665.2 415 75.4
Psat6g217600 Pisum sativum HOM05D003735 ORTHO05D004550 3.2e-189 665.2 412 76.5
Cpa.g.sc106.101 Carica papaya HOM05D003735 ORTHO05D004550 7.2e-189 664.1 416 75.7
VMungo0720G1863 Vigna mungo HOM05D003735 ORTHO05D004550 1.2e-188 663.3 416 75.7
MD10G1098700 Malus domestica HOM05D003735 ORTHO05D004550 1.6e-188 662.9 414 77.1
Phvul.007G040800 Phaseolus vulgaris HOM05D003735 ORTHO05D004550 1.6e-188 662.9 416 74.8
Solyc01g107550.3 Solanum lycopersicum HOM05D003735 ORTHO05D004550 1.6e-188 662.9 416 76.0
Gorai.008G022500 Gossypium raimondii HOM05D003735 ORTHO05D004550 2.8e-188 662.1 420 76.0
SGA_v2.0_scaffold393G50713 Striga asiatica HOM05D003735 ORTHO05D004550 3.6e-188 661.8 416 75.2
RcHm_v2.0_Chr6g0254911 Rosa chinensis HOM05D003735 ORTHO05D004550 4.7e-188 661.4 416 76.4
PGR142G3714 Punica granatum HOM05D003735 ORTHO05D004550 6.1e-188 661.0 416 75.0
MD10G1147300 Malus domestica HOM05D003735 ORTHO05D004550 1.0e-187 660.2 414 77.1
Phvul.007G040700 Phaseolus vulgaris HOM05D003735 ORTHO05D004550 1.0e-187 660.2 416 75.0
Lalb_Chr02g0145261 Lupinus albus HOM05D003735 ORTHO05D004550 3.0e-187 658.7 416 75.0
AUR62025585 Chenopodium quinoa HOM05D003735 ORTHO05D004550 4.0e-187 658.3 415 75.2
Gorai.008G022400 Gossypium raimondii HOM05D003735 ORTHO05D004550 4.0e-187 658.3 420 76.0
Hund06312 Selenicereus undatus HOM05D003735 ORTHO05D004550 6.8e-187 657.5 415 76.9
FvH4_2g05040 Fragaria vesca HOM05D003735 ORTHO05D004550 8.8e-187 657.1 416 76.4
arahy.Tifrunner.gnm1.ann1.HR3ZI9 Arachis hypogaea HOM05D003735 ORTHO05D004550 2.6e-186 655.6 420 74.5
ClCG05G010320 Citrullus lanatus HOM05D003735 ORTHO05D004550 2.6e-186 655.6 416 74.0
RcHm_v2.0_Chr2g0122061 Rosa chinensis HOM05D003735 ORTHO05D004550 2.6e-186 655.6 416 76.2
Oeu029527.5 Olea europaea HOM05D003735 ORTHO05D004550 7.5e-186 654.1 456 70.8
FAN24G3115 Fragaria x ananassa HOM05D003735 ORTHO05D004550 9.8e-186 653.7 416 76.0
THA.LOC104825376 Tarenaya hassleriana HOM05D003735 ORTHO05D004550 1.7e-185 652.9 420 74.3
Thecc.02G109600 Theobroma cacao HOM05D003735 ORTHO05D004550 1.7e-185 652.9 437 73.5
EL10Ac9g22264 Beta vulgaris HOM05D003735 ORTHO05D004550 2.2e-185 652.5 412 76.2
TWI75G1082 Tripterygium wilfordii HOM05D003735 ORTHO05D004550 2.8e-185 652.1 414 74.9
FAN20G1457 Fragaria x ananassa HOM05D003735 ORTHO05D004550 1.1e-184 650.2 432 73.8
Psat6g217400 Pisum sativum HOM05D003735 ORTHO05D004550 1.1e-184 650.2 412 73.8
AUR62001369 Chenopodium quinoa HOM05D003735 ORTHO05D004550 2.4e-184 649.0 415 74.5
MSTRG.27746 Avicennia marina HOM05D003735 ORTHO05D004550 1.2e-183 646.7 415 74.7
FAN27G1495 Fragaria x ananassa HOM05D003735 ORTHO05D004550 1.6e-183 646.4 432 73.8
BolC6t35561H Brassica oleracea HOM05D003735 ORTHO05D004550 2.0e-183 646.0 416 74.8
FAN15G3608 Fragaria x ananassa HOM05D003735 ORTHO05D004550 2.7e-183 645.6 432 73.6
C06p04320 Brassica napus HOM05D003735 ORTHO05D004550 5.9e-183 644.4 416 74.3
BcaC08g43148 Brassica carinata HOM05D003735 ORTHO05D004550 7.8e-183 644.0 416 74.3
Lsat_1_v5_gn_5_115400 Lactuca sativa HOM05D003735 ORTHO05D004550 1.3e-182 643.3 411 74.5
HanXRQChr10g0296961 Helianthus annuus HOM05D003735 ORTHO05D004550 2.3e-182 642.5 411 74.0
A06p03780 Brassica napus HOM05D003735 ORTHO05D004550 3.8e-182 641.7 416 74.3
BraA06t23583Z Brassica rapa HOM05D003735 ORTHO05D004550 5.0e-182 641.3 416 74.0
MELO3C019550.2 Cucumis melo HOM05D003735 ORTHO05D004550 5.0e-182 641.3 416 71.9
Carub.0001s3903 Capsella rubella HOM05D003735 ORTHO05D004550 6.6e-182 641.0 416 75.2
CARHR039880 Cardamine hirsuta HOM05D003735 ORTHO05D004550 6.6e-182 641.0 417 74.6
Ca_11064_v3 Cicer arietinum L. HOM05D003735 ORTHO05D004550 8.6e-182 640.6 416 72.6
ECA234G0132 Erigeron canadensis HOM05D003735 ORTHO05D004550 8.6e-182 640.6 413 74.3
arahy.Tifrunner.gnm1.ann1.678ZZJ Arachis hypogaea HOM05D003735 ORTHO05D004550 1.5e-181 639.8 453 69.1
AUR62039068 Chenopodium quinoa HOM05D003735 ORTHO05D004550 1.5e-181 639.8 411 74.9
Aa31LG10G4250 Aethionema arabicum HOM05D003735 ORTHO05D004550 2.5e-181 639.0 416 74.8
Thhalv10011522m.g Eutrema salsugineum HOM05D003735 ORTHO05D004550 3.3e-181 638.6 420 74.3
AT1G49820 Arabidopsis thaliana HOM05D003735 ORTHO05D004550 4.3e-181 638.3 418 74.4
PSO675G8377 Papaver somniferum HOM05D003735 ORTHO05D004550 7.3e-181 637.5 420 76.2
CsaV3_3G018170 Cucumis sativus L. HOM05D003735 ORTHO05D004550 1.2e-180 636.7 416 71.4
Sp1g36700 Schrenkiella parvula HOM05D003735 ORTHO05D004550 1.2e-180 636.7 416 73.3
Prupe.7G233900 Prunus persica HOM05D003735 ORTHO05D004550 3.6e-180 635.2 412 72.6
BcaB07g33662 Brassica carinata HOM05D003735 ORTHO05D004550 8.0e-180 634.0 417 73.6
unitig_747.g21222 Utricularia gibba HOM05D003735 ORTHO05D004550 1.0e-179 633.6 419 72.1
TWI79G0069 Tripterygium wilfordii HOM05D003735 ORTHO05D004550 3.0e-179 632.1 414 72.0
CSS0020963 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 6.8e-179 630.9 420 74.3
PSO541G1406 Papaver somniferum HOM05D003735 ORTHO05D004550 2.6e-178 629.0 420 75.7
HPP92_011617 Vanilla planifolia HOM05D003735 ORTHO05D004550 5.7e-178 627.9 415 73.0
MBI16_g19654_MAGBIO Magnolia biondii HOM05D003735 ORTHO05D004550 1.1e-176 623.6 408 74.3
AL1G57300 Arabidopsis lyrata HOM05D003735 ORTHO05D004550 1.8e-176 622.9 416 73.6
Gohir.D12G022100 Gossypium hirsutum HOM05D003735 ORTHO05D004550 9.2e-176 620.5 420 72.1
Os04g0669800 Oryza sativa ssp. japonica HOM05D003735 ORTHO05D004550 9.2e-176 620.5 410 72.2
Oeu013756.1 Olea europaea HOM05D003735 ORTHO05D004550 1.2e-175 620.2 498 62.7
CDE02G0578 Ceratophyllum demersum HOM05D003735 ORTHO05D004550 1.6e-175 619.8 420 70.0
Zm00001eb433310 Zea mays HOM05D003735 ORTHO05D004550 3.5e-175 618.6 412 70.4
MD10G1098200 Malus domestica HOM05D003735 ORTHO05D004550 1.3e-174 616.7 416 72.8
CSS0002879 Camellia sinensis var. sinensis HOM05D003735 ORTHO05D004550 3.9e-174 615.1 362 81.5
Lj9C323T5 Lonicera japonica HOM05D003735 ORTHO05D004550 1.1e-173 613.6 368 79.9
Lalb_Chr09g0319561 Lupinus albus HOM05D003735 ORTHO05D004550 1.9e-173 612.8 417 71.0
TPR.G19078 Trifolium pratense HOM05D003735 ORTHO05D004550 5.6e-173 611.3 418 70.1
ATR0589G073 Amborella trichopoda HOM05D003735 ORTHO05D004550 2.8e-172 609.0 411 71.5
Os04g0669900 Oryza sativa ssp. japonica HOM05D003735 ORTHO05D004550 1.0e-171 607.1 411 70.8
ECA232G2787 Erigeron canadensis HOM05D003735 ORTHO05D004550 2.3e-171 605.9 413 70.5
Ah.01g018310 Amaranthus hybridus HOM05D003735 ORTHO05D004550 1.2e-170 603.6 416 71.2
VMungo1215G1247 Vigna mungo HOM05D003735 ORTHO05D004550 2.4e-168 595.9 417 67.6
RcHm_v2.0_Chr6g0254921 Rosa chinensis HOM05D003735 ORTHO05D004550 2.2e-161 572.8 363 75.2
Sed0001414 Sechium edule HOM05D003735 ORTHO05D004550 4.6e-159 565.1 359 73.8
BcaC08g43149 Brassica carinata HOM05D003735 ORTHO05D004550 3.9e-158 562.0 416 68.5
SMO340G0152 Selaginella moellendorffii HOM05D003735 ORTHO05D004550 1.5e-157 560.1 412 63.1
Eucgr.I01100 Eucalyptus grandis HOM05D003735 ORTHO05D004550 1.2e-156 557.0 343 76.7
TPR.G3238 Trifolium pratense HOM05D003735 ORTHO05D004550 1.1e-155 553.9 341 76.5
DCAR_001652 Daucus carota HOM05D003735 ORTHO05D004550 4.4e-154 548.5 419 65.2
vmacro01998 Vaccinium macrocarpon HOM05D003735 ORTHO05D004550 6.4e-153 544.7 437 64.1
Pp3c6_19060 Physcomitrium patens HOM05D003735 ORTHO05D004550 8.4e-153 544.3 413 61.5
AagrBONN_evm.TU.Sc2ySwM_344.2850 Anthoceros agrestis HOM05D003735 ORTHO05D004550 4.0e-147 525.4 410 61.0
Mapoly0029s0020 Marchantia polymorpha HOM05D003735 ORTHO05D004550 4.9e-145 518.5 411 60.1
CBR_g23696 Chara braunii HOM05D003735 ORTHO05D004550 1.3e-134 483.8 428 55.8
Cfa004590 Carpinus fangiana HOM05D003735 ORTHO05D004550 1.1e-131 474.2 298 77.2
AUR62010319 Chenopodium quinoa HOM05D003735 ORTHO05D004550 3.8e-129 465.7 340 67.9
arahy.Tifrunner.gnm1.ann1.TAI6X1 Arachis hypogaea HOM05D003735 ORTHO05D004550 4.5e-122 442.2 316 69.9
QL11p033306 Quercus lobata HOM05D003735 ORTHO05D004550 1.6e-119 433.7 302 71.9
Peaxi162Scf00152g00332 Petunia axillaris HOM05D003735 ORTHO05D004550 1.9e-112 410.2 291 70.4
QL11p033359 Quercus lobata HOM05D003735 ORTHO05D004550 1.5e-109 400.6 223 83.9
CBR_g12222 Chara braunii HOM05D003735 ORTHO05D004550 4.8e-108 395.6 502 42.6
Cre16.g673550 Chlamydomonas reinhardtii HOM05D003735 ORTHO05D007494 9.1e-107 391.3 401 49.4
PRCOL_00000373 Prasinoderma coloniale HOM05D003735 ORTHO05D006943 2.9e-105 386.3 406 48.8
MCO11G261 Micromonas commoda HOM05D003735 ORTHO05D007494 1.1e-101 374.4 421 46.6
arahy.Tifrunner.gnm1.ann1.Z6IW8Q Arachis hypogaea HOM05D003735 ORTHO05D004550 4.5e-98 362.5 235 74.5
Glyma.01G244200 Glycine max HOM05D003735 ORTHO05D004550 1.5e-93 347.4 242 67.8
Nitab4.5_0026736g0020 Nicotiana tabacum HOM05D003735 ORTHO05D004550 6.3e-92 342.0 198 79.8
Nitab4.5_0001143g0070 Nicotiana tabacum HOM05D003735 ORTHO05D004550 2.6e-90 336.7 198 78.3
Cc02_g18410 Coffea canephora HOM05D003735 ORTHO05D004550 2.2e-76 290.4 225 64.9
arahy.Tifrunner.gnm1.ann1.83SMNU Arachis hypogaea HOM05D003735 ORTHO05D004550 2.4e-75 287.0 231 65.8
Cc01_g17410 Coffea canephora HOM05D003735 ORTHO05D004550 7.3e-64 248.8 178 66.9
Hma1.2p1_1023F.1_g249070 Hydrangea macrophylla HOM05D003735 ORTHO05D004550 9.5e-64 248.4 258 54.7
ATR0589G120 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.5e-61 241.1 162 72.2
Peaxi162Scf00152g00233 Petunia axillaris HOM05D003735 ORTHO05D004550 4.6e-58 229.6 229 54.1
arahy.Tifrunner.gnm1.ann1.B546P6 Arachis hypogaea HOM05D003735 ORTHO05D004550 1.0e-57 228.4 151 74.8
Ciclev10029480m.g Citrus clementina HOM05D003735 ORTHO05D004550 8.6e-57 225.3 178 64.0
Glyma.01G244132 Glycine max HOM05D003735 ORTHO05D004550 8.9e-54 215.3 155 65.8
ATR0589G125 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.3e-52 211.5 124 78.2
Gorai.013G047300 Gossypium raimondii HOM05D003735 ORTHO05D004550 3.3e-48 196.8 181 56.4
QL11p033356 Quercus lobata HOM05D003735 ORTHO05D004550 4.3e-48 196.4 129 72.1
Nitab4.5_0001143g0030 Nicotiana tabacum HOM05D003735 ORTHO05D004550 1.4e-46 191.4 121 70.2
Gohir.A13G043900 Gossypium hirsutum HOM05D003735 ORTHO05D004550 1.1e-43 181.8 339 36.6
Aqoxy6G02845 Aquilegia oxysepala HOM05D003735 ORTHO05D004550 6.0e-42 176.0 126 66.7
Gohir.D13G042333 Gossypium hirsutum HOM05D003735 ORTHO05D004550 3.3e-40 170.2 345 35.7
ATR0589G028 Amborella trichopoda HOM05D003735 ORTHO05D004550 2.9e-36 157.1 122 60.7
TAR376G0098 Trochodendron aralioides HOM05D003735 ORTHO05D004550 1.1e-35 155.2 100 74.0
MBI14_g39937_MAGBIO Magnolia biondii HOM05D003735 ORTHO05D022889 3.5e-26 123.6 66 81.8
TPR.G20408 Trifolium pratense HOM05D003735 ORTHO05D004550 6.0e-26 122.9 86 67.4
Nn4g25342 Nelumbo nucifera HOM05D003735 ORTHO05D004550 5.1e-25 119.8 71 78.9
Gorai.013G047400 Gossypium raimondii HOM05D003735 ORTHO05D004550 7.3e-24 115.9 128 50.8
TPR.G31649 Trifolium pratense HOM05D000067 ORTHO05D000097 1.3e-15 88.6 87 48.3
TPR.G13570 Trifolium pratense HOM05D003735 ORTHO05D004354 8.1e-15 85.9 98 42.9
Aqoxy6G02846 Aquilegia oxysepala HOM05D003735 ORTHO05D004550 2.4e-14 84.3 57 71.9
ATR0589G078 Amborella trichopoda HOM05D003735 ORTHO05D004550 1.6e-10 71.6 59 64.4
Cre07.g342900 Chlamydomonas reinhardtii HOM05D003735 ORTHO05D146703 1.6e-07 61.6 293 21.8
Sabra16G0188100 Salix brachista HOM05D003735 ORTHO05D349252 3.1e-06 57.4 35 68.6
BcaC08g43052 Brassica carinata HOM05D003735 ORTHO05D004550 9.0e-06 55.8 42 66.7


User provided reference genes

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