Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021977 Daucus carota HOM05D003477 ORTHO05D004043 8.2e-42 173.3 89 100.0
CSS0007946 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 2.0e-19 99.0 86 61.6
CSS0046932 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 2.0e-19 99.0 86 61.6
Actinidia00402 Actinidia chinensis HOM05D003477 ORTHO05D004043 2.6e-19 98.6 88 61.4
Lsat_1_v5_gn_9_111940 Lactuca sativa HOM05D003477 ORTHO05D004043 7.5e-19 97.1 89 64.0
Rhsim11G0156400 Rhododendron simsii HOM05D003477 ORTHO05D004043 3.7e-18 94.7 86 59.3
Actinidia34393 Actinidia chinensis HOM05D003477 ORTHO05D004043 4.8e-18 94.4 89 59.6
Rhsim11G0157900 Rhododendron simsii HOM05D003477 ORTHO05D004043 6.3e-18 94.0 86 59.3
Hma1.2p1_1023F.1_g249010 Hydrangea macrophylla HOM05D003477 ORTHO05D004043 1.4e-17 92.8 86 60.5
vmacro01991 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 1.4e-17 92.8 88 59.1
SGA_v2.0_scaffold32G13034 Striga asiatica HOM05D003477 ORTHO05D004043 2.4e-17 92.0 91 59.3
Dinv42204 Davidia involucrata HOM05D003477 ORTHO05D004043 3.1e-17 91.7 86 59.3
Dinv15774 Davidia involucrata HOM05D003477 ORTHO05D004043 1.6e-16 89.4 91 57.1
Rhsim05G0089200 Rhododendron simsii HOM05D003477 ORTHO05D004043 1.6e-16 89.4 90 57.8
ECA240G1244 Erigeron canadensis HOM05D003477 ORTHO05D004043 1.0e-15 86.7 86 59.3
Oeu013760.1 Olea europaea HOM05D003477 ORTHO05D004043 1.0e-15 86.7 92 57.6
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 1.0e-15 86.7 92 55.4
HanXRQChr03g0068771 Helianthus annuus HOM05D003477 ORTHO05D004043 1.3e-15 86.3 86 60.5
DCAR_001659 Daucus carota HOM05D003477 ORTHO05D004043 1.7e-15 85.9 88 58.0
Nitab4.5_0003699g0030 Nicotiana tabacum HOM05D003477 ORTHO05D004043 5.0e-15 84.3 86 54.7
PGSC0003DMG400025859 Solanum tuberosum HOM05D003477 ORTHO05D004043 6.6e-15 84.0 91 50.5
vmacro19455 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 8.6e-15 83.6 91 53.8
SGA_v2.0_scaffold225G42992 Striga asiatica HOM05D003477 ORTHO05D004043 1.1e-14 83.2 93 55.9
Sopen01g049690 Solanum pennellii HOM05D003477 ORTHO05D004043 1.5e-14 82.8 89 50.6
CAN.G606.19 Capsicum annuum HOM05D003477 ORTHO05D004043 3.3e-14 81.6 91 49.5
Nn5g30458 Nelumbo nucifera HOM05D003477 ORTHO05D004043 3.3e-14 81.6 93 53.8
Peaxi162Scf00152g00313 Petunia axillaris HOM05D003477 ORTHO05D004043 4.2e-14 81.3 77 53.2
TAR381G0852 Trochodendron aralioides HOM05D003477 ORTHO05D004043 4.2e-14 81.3 89 57.3
DCAR_029094 Daucus carota HOM05D003477 ORTHO05D004043 5.5e-14 80.9 88 53.4
Oeu029533.3 Olea europaea HOM05D003477 ORTHO05D004043 9.5e-14 80.1 90 54.4
Thecc.02G111100 Theobroma cacao HOM05D003477 ORTHO05D004043 9.5e-14 80.1 91 54.9
CiPaw.05G013300 Carya illinoinensis HOM05D003477 ORTHO05D004043 1.6e-13 79.3 94 56.4
Gohir.A12G021300 Gossypium hirsutum HOM05D003477 ORTHO05D004043 1.6e-13 79.3 85 54.1
Duzib052G0507 Durio zibethinus HOM05D003477 ORTHO05D004043 2.8e-13 78.6 93 52.7
Prupe.8G137400 Prunus persica HOM05D003477 ORTHO05D004043 2.8e-13 78.6 93 53.8
Solyc01g107450.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 2.8e-13 78.6 89 48.3
TWI79G1417 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 6.1e-13 77.4 91 54.9
Gorai.008G021900 Gossypium raimondii HOM05D003477 ORTHO05D004043 1.4e-12 76.3 93 51.6
Cc02_g19410 Coffea canephora HOM05D003477 ORTHO05D004043 2.3e-12 75.5 91 49.5
Duzib132G0501 Durio zibethinus HOM05D003477 ORTHO05D004043 2.3e-12 75.5 91 51.6
Migut.B00399 Erythranthe guttata HOM05D003477 ORTHO05D004043 3.0e-12 75.1 91 53.8
Gorai.005G234400 Gossypium raimondii HOM05D003477 ORTHO05D004043 3.0e-12 75.1 93 52.7
Nn1g04659 Nelumbo nucifera HOM05D003477 ORTHO05D004043 3.0e-12 75.1 93 51.6
SalBow3G1026 Salvia bowleyana HOM05D003477 ORTHO05D004043 3.0e-12 75.1 93 50.5
TAR376G0403 Trochodendron aralioides HOM05D003477 ORTHO05D004043 4.0e-12 74.7 92 51.1
Haze_10200 Corylus avellana HOM05D003477 ORTHO05D004043 5.2e-12 74.3 90 54.4
Gohir.A03G185500 Gossypium hirsutum HOM05D003477 ORTHO05D004043 5.2e-12 74.3 91 52.7
Gohir.D02G206836 Gossypium hirsutum HOM05D003477 ORTHO05D004043 5.2e-12 74.3 91 52.7
Gohir.D12G021600 Gossypium hirsutum HOM05D003477 ORTHO05D004043 6.8e-12 73.9 91 50.5
FvH4_2g04800 Fragaria vesca HOM05D003477 ORTHO05D004043 8.9e-12 73.6 90 54.4
Aqoxy6G02834 Aquilegia oxysepala HOM05D003477 ORTHO05D004043 1.2e-11 73.2 95 49.5
TWI31G0442 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 1.2e-11 73.2 86 53.5
Duzib248G0529 Durio zibethinus HOM05D003477 ORTHO05D004043 2.0e-11 72.4 91 50.5
MBI04_g11440_MAGBIO Magnolia biondii HOM05D003477 ORTHO05D004043 2.0e-11 72.4 85 51.8
Eucgr.I01090 Eucalyptus grandis HOM05D003477 ORTHO05D004043 3.4e-11 71.6 93 54.8
FAN24G0602 Fragaria x ananassa HOM05D003477 ORTHO05D004043 3.4e-11 71.6 90 53.3
GSVIVG01037899001 Vitis vinifera HOM05D003477 ORTHO05D004043 3.4e-11 71.6 78 53.8
Duzib248G0862 Durio zibethinus HOM05D003477 ORTHO05D004043 4.4e-11 71.2 92 50.0
SalBow6G1705 Salvia bowleyana HOM05D003477 ORTHO05D004043 4.4e-11 71.2 94 51.1
arahy.Tifrunner.gnm1.ann1.S3TCSS Arachis hypogaea HOM05D003477 ORTHO05D004043 5.7e-11 70.9 92 53.3
Manes.07G066700 Manihot esculenta HOM05D003477 ORTHO05D004043 5.7e-11 70.9 94 52.1
PSO675G8803 Papaver somniferum HOM05D003477 ORTHO05D004043 5.7e-11 70.9 93 49.5
MD10G1099700 Malus domestica HOM05D003477 ORTHO05D004043 9.8e-11 70.1 91 50.5
FAN20G0459 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.3e-10 69.7 90 52.2
PSO541G5514 Papaver somniferum HOM05D003477 ORTHO05D004043 1.7e-10 69.3 93 48.4
RcHm_v2.0_Chr6g0254531 Rosa chinensis HOM05D003477 ORTHO05D004043 1.7e-10 69.3 91 52.7
Glyma.20G130500 Glycine max HOM05D003477 ORTHO05D004043 2.2e-10 68.9 89 50.6
arahy.Tifrunner.gnm1.ann1.K085P0 Arachis hypogaea HOM05D003477 ORTHO05D004043 2.8e-10 68.6 92 53.3
FAN15G1392 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.8e-10 68.6 90 52.2
HanXRQChr09g0251061 Helianthus annuus HOM05D003477 ORTHO05D004043 3.7e-10 68.2 89 53.9
Potri.001G298800 Populus trichocarpa HOM05D003477 ORTHO05D004043 3.7e-10 68.2 91 49.5
unitig_22.g5195 Utricularia gibba HOM05D003477 ORTHO05D004043 3.7e-10 68.2 90 52.2
CANSAT25G3186 Cannabis sativa HOM05D003477 ORTHO05D004043 4.9e-10 67.8 91 51.6
FAN27G0803 Fragaria x ananassa HOM05D003477 ORTHO05D004043 4.9e-10 67.8 90 52.2
Cfa004605 Carpinus fangiana HOM05D003477 ORTHO05D004043 6.3e-10 67.4 90 53.3
Eucgr.H02262 Eucalyptus grandis HOM05D003477 ORTHO05D004043 8.3e-10 67.0 88 51.1
PSO210G4486 Papaver somniferum HOM05D003477 ORTHO05D004043 8.3e-10 67.0 98 49.0
Sed0015852 Sechium edule HOM05D003477 ORTHO05D004043 8.3e-10 67.0 93 52.7
ClCG05G010360 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.1e-09 66.6 94 52.1
VMungo0720G2427 Vigna mungo HOM05D003477 ORTHO05D004043 1.8e-09 65.9 94 50.0
PSO675G3465 Papaver somniferum HOM05D003477 ORTHO05D004043 2.4e-09 65.5 82 46.3
QL11p032673 Quercus lobata HOM05D003477 ORTHO05D004043 4.1e-09 64.7 93 51.6
CDE02G3617 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 5.4e-09 64.3 88 48.9
Potri.009G093400 Populus trichocarpa HOM05D003477 ORTHO05D004043 5.4e-09 64.3 91 48.4
Sabra16G0187400 Salix brachista HOM05D003477 ORTHO05D004043 9.2e-09 63.5 90 47.8
CsaV3_3G018130 Cucumis sativus L. HOM05D003477 ORTHO05D004043 1.2e-08 63.2 92 50.0
CsaV3_7G008070 Cucumis sativus L. HOM05D010572 ORTHO05D012753 1.6e-08 62.8 95 51.6
EL10Ac6g15680 Beta vulgaris HOM05D003477 ORTHO05D004043 2.0e-08 62.4 93 44.1
SGA_v2.0_scaffold13G06619 Striga asiatica HOM05D003477 ORTHO05D004043 2.7e-08 62.0 112 42.0
Ca_11060_v3 Cicer arietinum L. HOM05D003477 ORTHO05D004043 4.5e-08 61.2 94 50.0
Phvul.002G014500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 4.5e-08 61.2 94 45.7
Phvul.007G041500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 4.5e-08 61.2 92 45.7
Lalb_Chr02g0145231 Lupinus albus HOM05D003477 ORTHO05D004043 5.9e-08 60.8 85 50.6
MELO3C018498.2 Cucumis melo HOM05D003477 ORTHO05D004043 7.8e-08 60.5 94 51.1
Sed0009886 Sechium edule HOM05D003477 ORTHO05D004043 7.8e-08 60.5 92 51.1
unitig_0.g877 Utricularia gibba HOM05D003477 ORTHO05D004043 7.8e-08 60.5 93 44.1
Atru.chr5.2447 Acer truncatum HOM05D003477 ORTHO05D004043 1.0e-07 60.1 90 48.9
AUR62003947 Chenopodium quinoa HOM05D003477 ORTHO05D004043 1.0e-07 60.1 92 44.6
PSO675G6764 Papaver somniferum HOM05D003477 ORTHO05D004043 1.0e-07 60.1 76 43.4
AUR62038261 Chenopodium quinoa HOM05D003477 ORTHO05D004043 1.3e-07 59.7 92 44.6
Psat6g216680 Pisum sativum HOM05D003477 ORTHO05D004043 1.3e-07 59.7 96 47.9
Medtr1g107085 Medicago truncatula HOM05D003477 ORTHO05D004043 2.3e-07 58.9 96 47.9
ClCG02G006540 Citrullus lanatus HOM05D003477 ORTHO05D004043 3.9e-07 58.2 92 46.7
Dinv26882 Davidia involucrata HOM05D003477 ORTHO05D004043 3.9e-07 58.2 90 44.4
Lj2g0006602 Lotus japonicus HOM05D003477 ORTHO05D004043 6.6e-07 57.4 93 44.1
Hund16371 Selenicereus undatus HOM05D003477 ORTHO05D004043 6.6e-07 57.4 100 45.0
Ca_24733_v3 Cicer arietinum L. HOM05D002634 ORTHO05D003100 1.1e-06 56.6 93 43.0
Sc16g0001450 Simmondsia chinensis HOM05D003477 ORTHO05D004043 1.5e-06 56.2 94 44.7
unitig_61.g26022 Utricularia gibba HOM05D003477 ORTHO05D004043 1.5e-06 56.2 90 41.1
Lj5g0009419 Lotus japonicus HOM05D003477 ORTHO05D004043 1.9e-06 55.8 93 45.2
CDE01G0745 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 2.5e-06 55.5 94 45.7
CSS0020585 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 3.3e-06 55.1 93 43.0
Lalb_Chr21g0308261 Lupinus albus HOM05D003477 ORTHO05D004043 4.3e-06 54.7 90 46.7
arahy.Tifrunner.gnm1.ann1.VE84TY Arachis hypogaea HOM05D003477 ORTHO05D004043 5.6e-06 54.3 92 41.3
arahy.Tifrunner.gnm1.ann1.T63M72 Arachis hypogaea HOM05D003477 ORTHO05D004043 7.3e-06 53.9 89 41.6
Ciclev10029666m.g Citrus clementina HOM05D003477 ORTHO05D004043 7.3e-06 53.9 92 46.7
Psat2g169360 Pisum sativum HOM05D003477 ORTHO05D004043 7.3e-06 53.9 93 43.0


User provided reference genes

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