Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021946 Daucus carota HOM05D001896 ORTHO05D001862 3.7e-85 318.2 160 100.0
QL11p029532 Quercus lobata HOM05D001896 ORTHO05D001862 2.7e-19 99.4 158 39.2
Dinv42246 Davidia involucrata HOM05D001896 ORTHO05D001862 2.5e-17 92.8 152 41.4
Dinv16071 Davidia involucrata HOM05D001896 ORTHO05D001862 2.8e-16 89.4 152 40.8
DCAR_001739 Daucus carota HOM05D026127 ORTHO05D029209 1.2e-14 84.0 141 40.4
Thecc.02G119300 Theobroma cacao HOM05D001896 ORTHO05D001862 1.2e-14 84.0 150 36.0
CSS0026617 Camellia sinensis var. sinensis HOM05D001896 ORTHO05D001862 1.5e-14 83.6 168 33.3
Nitab4.5_0003129g0070 Nicotiana tabacum HOM05D001896 ORTHO05D001862 1.3e-13 80.5 158 37.3
Duzib052G0412 Durio zibethinus HOM05D001896 ORTHO05D001862 3.8e-13 79.0 156 34.0
RcHm_v2.0_Chr2g0108431 Rosa chinensis HOM05D001896 ORTHO05D001862 4.9e-13 78.6 165 37.6
PGR142G1913 Punica granatum HOM05D001896 ORTHO05D001862 2.5e-12 76.3 147 34.0
CiPaw.05G020300 Carya illinoinensis HOM05D001896 ORTHO05D001862 4.2e-12 75.5 152 34.9
Ciclev10030063m.g Citrus clementina HOM05D001896 ORTHO05D001862 9.3e-12 74.3 148 35.1
QL06p039341 Quercus lobata HOM05D001896 ORTHO05D001862 1.2e-11 73.9 161 36.0
Actinidia32848 Actinidia chinensis HOM05D001896 ORTHO05D001862 2.1e-11 73.2 156 38.5
Prupe.6G218500 Prunus persica HOM05D001896 ORTHO05D001862 2.1e-11 73.2 163 32.5
Eucgr.I00689 Eucalyptus grandis HOM05D001896 ORTHO05D001862 3.5e-11 72.4 138 38.4
Oeu021445.1 Olea europaea HOM05D001896 ORTHO05D001862 3.5e-11 72.4 150 35.3
CiPaw.07G173200 Carya illinoinensis HOM05D001896 ORTHO05D001862 4.6e-11 72.0 158 37.3
Oeu013335.1 Olea europaea HOM05D001896 ORTHO05D001862 4.6e-11 72.0 145 34.5
Cfa004148 Carpinus fangiana HOM05D001896 ORTHO05D001862 6.1e-11 71.6 159 35.2
Eucgr.L02595 Eucalyptus grandis HOM05D001896 ORTHO05D001862 6.1e-11 71.6 156 37.2
PGSC0003DMG400021411 Solanum tuberosum HOM05D001896 ORTHO05D001862 7.9e-11 71.2 164 36.6
Ciclev10029922m.g Citrus clementina HOM05D001896 ORTHO05D001862 1.0e-10 70.9 136 36.0
CiPaw.01G002900 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.3e-10 70.5 151 31.8
MD02G1188200 Malus domestica HOM05D001896 ORTHO05D001862 1.3e-10 70.5 154 35.7
Potri.009G086000 Populus trichocarpa HOM05D001896 ORTHO05D001862 1.3e-10 70.5 158 34.2
CAN.G1075.50 Capsicum annuum HOM05D001896 ORTHO05D001862 2.3e-10 69.7 159 37.1
Dinv44941 Davidia involucrata HOM05D001896 ORTHO05D001862 2.3e-10 69.7 167 33.5
Duzib147G1417 Durio zibethinus HOM05D001896 ORTHO05D001862 2.3e-10 69.7 152 34.9
Prupe.8G148800 Prunus persica HOM05D001896 ORTHO05D001862 2.3e-10 69.7 157 35.7
TAR628G1651 Trochodendron aralioides HOM05D001896 ORTHO05D001862 2.3e-10 69.7 153 39.2
Solyc02g092190.1 Solanum lycopersicum HOM05D001896 ORTHO05D001862 3.0e-10 69.3 159 35.8
Sopen02g036760 Solanum pennellii HOM05D001896 ORTHO05D001862 3.0e-10 69.3 159 35.8
FvH4_2g03520 Fragaria vesca HOM05D001896 ORTHO05D001862 3.9e-10 68.9 173 32.4
FAN24G1511 Fragaria x ananassa HOM05D001896 ORTHO05D001862 3.9e-10 68.9 173 32.4
Aqoxy6G02540 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 5.1e-10 68.6 153 38.6
Manes.07G053000 Manihot esculenta HOM05D001896 ORTHO05D001862 5.1e-10 68.6 148 33.1
COL.COLO4_11600 Corchorus olitorius HOM05D001896 ORTHO05D001862 6.7e-10 68.2 154 33.8
TAR625G0391 Trochodendron aralioides HOM05D001896 ORTHO05D001862 8.7e-10 67.8 148 35.8
FAN20G2517 Fragaria x ananassa HOM05D001896 ORTHO05D001862 1.1e-09 67.4 153 31.4
Nn5g30636 Nelumbo nucifera HOM05D001896 ORTHO05D001862 1.1e-09 67.4 159 34.6
Cfa013755 Carpinus fangiana HOM05D001896 ORTHO05D001862 1.9e-09 66.6 155 36.8
FvH4_1g17980 Fragaria vesca HOM05D001896 ORTHO05D001862 1.9e-09 66.6 166 36.7
Peaxi162Scf00449g00045 Petunia axillaris HOM05D001896 ORTHO05D001862 1.9e-09 66.6 164 36.0
QL12p038359 Quercus lobata HOM05D001896 ORTHO05D001862 1.9e-09 66.6 158 37.3
FAN19G1457 Fragaria x ananassa HOM05D001896 ORTHO05D001862 2.5e-09 66.2 166 36.7
MD15G1299400 Malus domestica HOM05D001896 ORTHO05D001862 2.5e-09 66.2 155 34.2
ClCG08G016610 Citrullus lanatus HOM05D001896 ORTHO05D001862 3.3e-09 65.9 159 32.1
Nitab4.5_0003129g0080 Nicotiana tabacum HOM05D001896 ORTHO05D001862 3.3e-09 65.9 154 35.1
Thecc.01G074600 Theobroma cacao HOM05D001896 ORTHO05D001862 3.3e-09 65.9 149 33.6
Duzib116G0259 Durio zibethinus HOM05D001896 ORTHO05D001862 4.3e-09 65.5 147 34.0
Glyma.05G107000 Glycine max HOM05D001896 ORTHO05D001862 4.3e-09 65.5 153 32.0
Duzib093G0976 Durio zibethinus HOM05D001896 ORTHO05D001862 5.7e-09 65.1 155 34.8
FvH4_2g32830 Fragaria vesca HOM05D001896 ORTHO05D001862 7.4e-09 64.7 165 30.3
FAN23G2360 Fragaria x ananassa HOM05D001896 ORTHO05D001862 7.4e-09 64.7 166 36.1
FAN26G2644 Fragaria x ananassa HOM05D001896 ORTHO05D001862 7.4e-09 64.7 166 36.1
FAN27G2593 Fragaria x ananassa HOM05D000371 ORTHO05D001484 7.4e-09 64.7 153 30.7
Gohir.A12G018801 Gossypium hirsutum HOM05D001896 ORTHO05D001862 7.4e-09 64.7 157 31.8
RcHm_v2.0_Chr6g0309871 Rosa chinensis HOM05D001896 ORTHO05D001862 7.4e-09 64.7 165 29.1
Cpa.g.sc142.51 Carica papaya HOM05D001896 ORTHO05D001862 9.7e-09 64.3 157 34.4
Haze_15187 Corylus avellana HOM05D001896 ORTHO05D001862 9.7e-09 64.3 153 33.3
FAN24G0761 Fragaria x ananassa HOM05D000371 ORTHO05D001484 9.7e-09 64.3 165 30.3
Nn6g34510 Nelumbo nucifera HOM05D001896 ORTHO05D001862 9.7e-09 64.3 154 36.4
CiPaw.08G051100 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.3e-08 63.9 153 35.9
CiPaw.02G001600 Carya illinoinensis HOM05D001896 ORTHO05D001862 1.6e-08 63.5 164 30.5
Eucgr.I01031 Eucalyptus grandis HOM05D001896 ORTHO05D001862 1.6e-08 63.5 146 32.9
Nitab4.5_0000142g0300 Nicotiana tabacum HOM05D001896 ORTHO05D001862 1.6e-08 63.5 153 32.7
Atru.chr5.2309 Acer truncatum HOM05D001896 ORTHO05D001862 2.2e-08 63.2 131 35.9
CsaV3_2G026000 Cucumis sativus L. HOM05D001896 ORTHO05D001862 2.2e-08 63.2 156 30.8
Glyma.04G046800 Glycine max HOM05D001896 ORTHO05D001862 2.8e-08 62.8 160 33.1
Rhsim06G0063700 Rhododendron simsii HOM05D001896 ORTHO05D001862 3.7e-08 62.4 170 32.9
PGSC0003DMG400044830 Solanum tuberosum HOM05D001896 ORTHO05D001862 3.7e-08 62.4 145 31.7
Cpa.g.c26343.5 Carica papaya HOM05D001896 ORTHO05D001862 4.8e-08 62.0 178 30.9
MELO3C010793.2 Cucumis melo HOM05D001896 ORTHO05D001862 4.8e-08 62.0 157 29.9
Migut.L00422 Erythranthe guttata HOM05D001896 ORTHO05D001862 4.8e-08 62.0 152 32.2
Gohir.A02G150400 Gossypium hirsutum HOM05D001896 ORTHO05D001862 4.8e-08 62.0 157 35.0
Nitab4.5_0001458g0050 Nicotiana tabacum HOM05D000058 ORTHO05D000255 4.8e-08 62.0 140 32.9
Eucgr.I01030 Eucalyptus grandis HOM05D001896 ORTHO05D001862 6.3e-08 61.6 138 34.8
Oeu054204.1 Olea europaea HOM05D001896 ORTHO05D001862 6.3e-08 61.6 154 31.2
Thecc.08G086000 Theobroma cacao HOM05D001896 ORTHO05D001862 6.3e-08 61.6 162 32.1
CAN.G1075.51 Capsicum annuum HOM05D001896 ORTHO05D001862 8.2e-08 61.2 147 35.4
Cpa.g.sc106.35 Carica papaya HOM05D001896 ORTHO05D001862 8.2e-08 61.2 156 32.1
Gohir.D12G019300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 8.2e-08 61.2 157 31.2
Gorai.008G019600 Gossypium raimondii HOM05D001896 ORTHO05D001862 8.2e-08 61.2 157 31.2
Nitab4.5_0000142g0290 Nicotiana tabacum HOM05D001896 ORTHO05D001862 8.2e-08 61.2 147 34.7
Phvul.003G233900 Phaseolus vulgaris HOM05D001896 ORTHO05D001862 8.2e-08 61.2 153 32.7
Manes.12G116200 Manihot esculenta HOM05D001896 ORTHO05D001862 1.1e-07 60.8 149 30.9
Peaxi162Scf00548g00211 Petunia axillaris HOM05D001896 ORTHO05D001862 1.1e-07 60.8 139 33.1
Glyma.17G159800 Glycine max HOM05D001896 ORTHO05D001862 1.4e-07 60.5 153 34.6
Sed0003560 Sechium edule HOM05D001896 ORTHO05D001862 1.4e-07 60.5 153 32.0
TAR381G1204 Trochodendron aralioides HOM05D001896 ORTHO05D001862 1.4e-07 60.5 164 31.7
Ciclev10030194m.g Citrus clementina HOM05D001896 ORTHO05D001862 1.8e-07 60.1 146 32.2
Lj7P110T16 Lonicera japonica HOM05D001896 ORTHO05D001862 1.8e-07 60.1 153 34.0
PSO017G0117 Papaver somniferum HOM05D001896 ORTHO05D001862 1.8e-07 60.1 170 30.6
PGR004G2665 Punica granatum HOM05D001896 ORTHO05D001862 1.8e-07 60.1 154 37.0
Peaxi162Scf00548g00022 Petunia axillaris HOM05D001896 ORTHO05D001862 2.4e-07 59.7 125 35.2
Gohir.D11G209900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 3.1e-07 59.3 150 32.7
Gorai.007G225100 Gossypium raimondii HOM05D001896 ORTHO05D001862 3.1e-07 59.3 150 32.7
PSO170G5938 Papaver somniferum HOM05D001896 ORTHO05D001862 3.1e-07 59.3 170 31.2
Manes.10G086100 Manihot esculenta HOM05D001896 ORTHO05D001862 4.1e-07 58.9 133 31.6
PGR083G2885 Punica granatum HOM05D001896 ORTHO05D001862 4.1e-07 58.9 168 35.1
VMungo0251G2220 Vigna mungo HOM05D001896 ORTHO05D001862 4.1e-07 58.9 154 33.8
Oeu053665.1 Olea europaea HOM05D001896 ORTHO05D001862 5.3e-07 58.5 150 30.7
Ciclev10026650m.g Citrus clementina HOM05D001896 ORTHO05D001862 9.0e-07 57.8 162 30.2
Haze_10311 Corylus avellana HOM05D001896 ORTHO05D001862 9.0e-07 57.8 131 32.8
VMungo1309G2110 Vigna mungo HOM05D001896 ORTHO05D001862 9.0e-07 57.8 163 30.1
Ciclev10029578m.g Citrus clementina HOM05D001896 ORTHO05D001862 1.2e-06 57.4 146 32.2
Oeu037286.1 Olea europaea HOM05D026127 ORTHO05D029209 1.2e-06 57.4 119 37.8
Phvul.009G073000 Phaseolus vulgaris HOM05D001896 ORTHO05D001862 1.2e-06 57.4 168 32.7
Gorai.003G031600 Gossypium raimondii HOM05D001896 ORTHO05D001862 1.5e-06 57.0 154 33.8
Gohir.A11G213300 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.0e-06 56.6 145 33.1
Gohir.D03G029900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 2.0e-06 56.6 157 33.8
Manes.10G086000 Manihot esculenta HOM05D001896 ORTHO05D001862 2.0e-06 56.6 149 34.2
Potri.014G014600 Populus trichocarpa HOM05D001896 ORTHO05D001862 2.0e-06 56.6 153 30.7
Atru.chr5.2308 Acer truncatum HOM05D001896 ORTHO05D001862 2.6e-06 56.2 154 31.8
Aqoxy6G02538 Aquilegia oxysepala HOM05D001896 ORTHO05D001862 2.6e-06 56.2 155 30.3
RcHm_v2.0_Chr6g0248931 Rosa chinensis HOM05D001896 ORTHO05D001862 2.6e-06 56.2 164 30.5
Actinidia00358 Actinidia chinensis HOM05D004083 ORTHO05D005029 3.4e-06 55.8 127 34.6
Oeu039850.1 Olea europaea HOM05D001896 ORTHO05D001862 3.4e-06 55.8 159 30.2
SGA_v2.0_scaffold13G06404 Striga asiatica HOM05D001896 ORTHO05D001862 3.4e-06 55.8 126 31.0
Lj4P164T35 Lonicera japonica HOM05D001896 ORTHO05D001862 4.5e-06 55.5 157 33.8
Potri.014G014500 Populus trichocarpa HOM05D001896 ORTHO05D001862 4.5e-06 55.5 157 30.6
RcHm_v2.0_Chr6g0248901 Rosa chinensis HOM05D001896 ORTHO05D001862 4.5e-06 55.5 158 32.9
Ciclev10030311m.g Citrus clementina HOM05D001896 ORTHO05D001862 5.9e-06 55.1 131 30.5
MD08G1080000 Malus domestica HOM05D001896 ORTHO05D001862 5.9e-06 55.1 168 31.0
GSVIVG01009317001 Vitis vinifera HOM05D001896 ORTHO05D001862 5.9e-06 55.1 156 34.0
Oeu015171.1 Olea europaea HOM05D001896 ORTHO05D001862 7.7e-06 54.7 150 28.7
Oeu021357.1 Olea europaea HOM05D026127 ORTHO05D029209 1.0e-05 54.3 151 31.1


User provided reference genes

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