Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021856 Daucus carota HOM05D012509 ORTHO05D009596 7.4e-71 270.4 133 100.0
DCAR_020898 Daucus carota HOM05D012509 ORTHO05D009596 5.7e-31 137.9 114 58.8
DCAR_009341 Daucus carota HOM05D001603 ORTHO05D001393 3.0e-24 115.5 117 48.7
PGSC0003DMG400004472 Solanum tuberosum HOM05D001603 ORTHO05D001393 3.7e-14 82.0 66 48.5
Peaxi162Scf01694g00006 Petunia axillaris HOM05D001603 ORTHO05D001393 1.8e-13 79.7 100 39.0
Peaxi162Scf01147g00112 Petunia axillaris HOM05D001603 ORTHO05D001393 2.4e-13 79.3 92 41.3
CAN.G184.41 Capsicum annuum HOM05D001603 ORTHO05D001393 5.4e-13 78.2 66 45.5
Sopen05g005970 Solanum pennellii HOM05D001603 ORTHO05D001393 9.2e-13 77.4 65 46.2
CAN.G184.54 Capsicum annuum HOM05D001603 ORTHO05D001393 2.7e-12 75.9 65 49.2
Atru.chr11.1514 Acer truncatum HOM05D001603 ORTHO05D001393 1.1e-10 70.5 127 33.1
CAN.G467.8 Capsicum annuum HOM05D004213 ORTHO05D005091 1.5e-10 70.1 73 39.7
Peaxi162Scf00088g00821 Petunia axillaris HOM05D001603 ORTHO05D001393 3.3e-10 68.9 60 48.3
CAN.G184.52 Capsicum annuum HOM05D001603 ORTHO05D001393 4.3e-10 68.6 65 46.2
Atru.chr7.1960 Acer truncatum HOM05D001603 ORTHO05D001393 5.6e-10 68.2 104 38.5
PGSC0003DMG401030716 Solanum tuberosum HOM05D001603 ORTHO05D001393 5.6e-10 68.2 69 40.6
Atru.chr7.2004 Acer truncatum HOM05D001603 ORTHO05D001393 7.3e-10 67.8 124 37.1
Atru.chr7.1961 Acer truncatum HOM05D001603 ORTHO05D001393 9.5e-10 67.4 100 40.0
Aqoxy6G02756 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 1.6e-09 66.6 68 39.7
Lsat_1_v5_gn_8_62881 Lactuca sativa HOM05D001603 ORTHO05D001393 2.1e-09 66.2 88 36.4
Atru.chr11.1201 Acer truncatum HOM05D001603 ORTHO05D001393 1.4e-08 63.5 101 32.7
MD17G1163700 Malus domestica HOM05D001603 ORTHO05D001393 1.4e-08 63.5 65 38.5
PSO782G1967 Papaver somniferum HOM05D001603 ORTHO05D001393 1.8e-08 63.2 68 35.3
Aqoxy6G02757 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 2.3e-08 62.8 87 33.3
Aqoxy6G02760 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 3.1e-08 62.4 64 37.5
PSO541G0615 Papaver somniferum HOM05D001603 ORTHO05D001393 4.0e-08 62.0 79 35.4
RcHm_v2.0_Chr2g0149601 Rosa chinensis HOM05D001603 ORTHO05D001393 4.0e-08 62.0 58 41.4
PSO782G2776 Papaver somniferum HOM05D001603 ORTHO05D001393 6.8e-08 61.2 73 34.2
AL3G12880 Arabidopsis lyrata HOM05D012509 ORTHO05D009596 8.9e-08 60.8 68 36.8
AT3G03272 Arabidopsis thaliana HOM05D012509 ORTHO05D009596 8.9e-08 60.8 68 36.8
TWI34G1934 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 8.9e-08 60.8 83 37.3
PSO384G2124 Papaver somniferum HOM05D001603 ORTHO05D001393 1.2e-07 60.5 68 38.2
MD09G1164100 Malus domestica HOM05D001603 ORTHO05D001393 1.5e-07 60.1 64 39.1
Carub.0003s0243 Capsella rubella HOM05D012509 ORTHO05D009596 2.6e-07 59.3 68 36.8
CiPaw.03G252200 Carya illinoinensis HOM05D001603 ORTHO05D001393 2.6e-07 59.3 101 30.7
Duzib187G1932 Durio zibethinus HOM05D001603 ORTHO05D001393 2.6e-07 59.3 64 40.6
PSO478G0125 Papaver somniferum HOM05D001603 ORTHO05D001393 3.4e-07 58.9 108 28.7
Sc18g0000140 Simmondsia chinensis HOM05D001603 ORTHO05D001393 3.4e-07 58.9 99 30.3
CSS0032619 Camellia sinensis var. sinensis HOM05D001603 ORTHO05D001393 4.4e-07 58.5 62 41.9
COL.COLO4_33374 Corchorus olitorius HOM05D001603 ORTHO05D001393 4.4e-07 58.5 118 31.4
ECA234G4287 Erigeron canadensis HOM05D001603 ORTHO05D001393 4.4e-07 58.5 104 31.7
C08p05580 Brassica napus HOM05D001603 ORTHO05D001393 5.8e-07 58.2 57 50.9
MD09G1163700 Malus domestica HOM05D001603 ORTHO05D001393 5.8e-07 58.2 54 42.6
MD09G1164600 Malus domestica HOM05D001603 ORTHO05D001393 5.8e-07 58.2 58 37.9
RcHm_v2.0_Chr2g0131141 Rosa chinensis HOM05D001603 ORTHO05D001393 7.5e-07 57.8 63 41.3
Thecc.09G137000 Theobroma cacao HOM05D001603 ORTHO05D001393 7.5e-07 57.8 48 45.8
THA.LOC104807823 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 9.8e-07 57.4 63 42.9
CARHR187420 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.3e-06 57.0 64 43.8
PSO478G1756 Papaver somniferum HOM05D001603 ORTHO05D001393 1.3e-06 57.0 71 33.8
Sc03g0004410 Simmondsia chinensis HOM05D001603 ORTHO05D001393 1.3e-06 57.0 74 33.8
Oeu063184.1 Olea europaea HOM05D002938 ORTHO05D002074 1.7e-06 56.6 61 31.1
PSO384G0997 Papaver somniferum HOM05D001603 ORTHO05D001393 1.7e-06 56.6 48 41.7
RcHm_v2.0_Chr2g0131221 Rosa chinensis HOM05D001603 ORTHO05D001393 1.7e-06 56.6 63 41.3
Carub.0008s1421 Capsella rubella HOM05D001603 ORTHO05D001393 2.2e-06 56.2 67 35.8
TWI34G1802 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 2.2e-06 56.2 65 36.9
Rhsim01G0055200 Rhododendron simsii HOM05D001603 ORTHO05D001393 2.9e-06 55.8 101 33.7
RcHm_v2.0_Chr2g0131241 Rosa chinensis HOM05D001603 ORTHO05D001393 2.9e-06 55.8 63 41.3
Rhsim03G0252800 Rhododendron simsii HOM05D001603 ORTHO05D001393 3.7e-06 55.5 61 37.7
THA.LOC104807891 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 3.7e-06 55.5 63 42.9
BcaC07g37177 Brassica carinata HOM05D001603 ORTHO05D001393 4.9e-06 55.1 73 42.5
Carub.0008s1435 Capsella rubella HOM05D001603 ORTHO05D001393 4.9e-06 55.1 64 37.5
COL.COLO4_33373 Corchorus olitorius HOM05D001603 ORTHO05D001393 4.9e-06 55.1 80 35.0
Potri.006G062100 Populus trichocarpa HOM05D001603 ORTHO05D001393 4.9e-06 55.1 120 31.7
BcaC01g04403 Brassica carinata HOM05D012509 ORTHO05D009596 6.4e-06 54.7 68 32.4
BcaC01g04408 Brassica carinata HOM05D012509 ORTHO05D009596 6.4e-06 54.7 68 32.4
A03p33250 Brassica napus HOM05D012509 ORTHO05D009596 6.4e-06 54.7 68 32.4
BolC3t16315H Brassica oleracea HOM05D012509 ORTHO05D009596 6.4e-06 54.7 68 32.4
BraA03t12497Z Brassica rapa HOM05D012509 ORTHO05D009596 6.4e-06 54.7 68 32.4
Carub.0008s1450 Capsella rubella HOM05D001603 ORTHO05D001393 6.4e-06 54.7 67 35.8
Migut.K00395 Erythranthe guttata HOM05D001603 ORTHO05D001393 6.4e-06 54.7 101 33.7
Thhalv10005180m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 6.4e-06 54.7 90 32.2
BcaC01g06072 Brassica carinata HOM05D001603 ORTHO05D001393 8.3e-06 54.3 77 37.7
C03p19220 Brassica napus HOM05D001603 ORTHO05D001393 8.3e-06 54.3 77 37.7
BolC3t14309H Brassica oleracea HOM05D001603 ORTHO05D001393 8.3e-06 54.3 77 37.7
Thecc.10G154400 Theobroma cacao HOM05D041229 ORTHO05D034836 8.3e-06 54.3 61 36.1


User provided reference genes

Program Settings