Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 2.4e-191 672.2 376 100.0
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 2.6e-81 306.6 402 54.2
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.7e-80 303.9 416 51.7
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 3.2e-79 299.7 393 50.1
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 1.0e-72 278.1 424 48.3
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 1.7e-72 277.3 376 49.5
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 6.5e-72 275.4 317 51.1
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 4.2e-71 272.7 377 47.7
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 9.4e-71 271.6 378 52.9
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 2.7e-70 270.0 398 46.0
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 2.7e-70 270.0 387 45.2
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 6.1e-70 268.9 396 44.4
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 1.8e-69 267.3 431 46.9
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 3.0e-69 266.5 417 48.4
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 5.1e-69 265.8 396 44.2
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 6.7e-69 265.4 384 46.6
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 1.1e-68 264.6 399 44.6
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 3.3e-68 263.1 374 47.6
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 3.3e-68 263.1 390 53.1
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 1.3e-67 261.2 424 48.6
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 3.7e-67 259.6 424 48.1
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 3.1e-66 256.5 384 45.6
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 3.1e-66 256.5 395 45.3
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 5.3e-66 255.8 359 49.0
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 6.9e-66 255.4 389 46.0
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 2.0e-65 253.8 365 48.8
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 2.0e-65 253.8 422 48.1
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 2.6e-65 253.4 425 47.3
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 1.3e-64 251.1 427 46.6
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 1.3e-64 251.1 355 47.3
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 1.3e-64 251.1 464 41.8
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 2.9e-64 250.0 408 42.6
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 2.9e-64 250.0 303 50.8
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 6.5e-64 248.8 386 45.6
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 1.1e-63 248.1 423 47.3
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 1.1e-63 248.1 398 44.5
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 1.4e-63 247.7 424 47.9
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 1.4e-63 247.7 400 44.5
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 1.9e-63 247.3 406 42.9
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 1.9e-63 247.3 353 48.2
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 2.5e-63 246.9 424 47.2
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 2.5e-63 246.9 407 43.7
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 3.2e-63 246.5 401 44.1
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 7.2e-63 245.4 395 43.3
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 9.4e-63 245.0 422 44.5
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 1.6e-62 244.2 370 45.7
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 2.1e-62 243.8 337 47.5
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 4.7e-62 242.7 381 46.2
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.8e-61 240.7 406 42.4
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 3.9e-61 239.6 394 42.6
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 5.1e-61 239.2 397 43.3
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 6.7e-61 238.8 427 44.0
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 6.7e-61 238.8 406 42.4
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 8.8e-61 238.4 430 43.0
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 1.1e-60 238.0 366 44.3
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.5e-60 237.7 405 42.5
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 1.5e-60 237.7 394 42.6
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 3.3e-60 236.5 364 45.3
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 5.7e-60 235.7 428 45.3
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 7.4e-60 235.3 395 43.5
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 2.8e-59 233.4 400 43.5
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 4.8e-59 232.6 271 53.1
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 6.3e-59 232.3 428 45.1
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 8.2e-59 231.9 378 45.5
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 1.1e-58 231.5 398 42.5
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 4.1e-58 229.6 300 48.3
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 7.0e-58 228.8 421 46.3
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 1.6e-57 227.6 360 44.2
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 1.6e-57 227.6 459 41.2
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 4.5e-57 226.1 358 46.1
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.3e-56 224.6 417 42.7
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 8.5e-56 221.9 366 44.3
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 2.7e-54 216.9 299 47.2
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 3.6e-54 216.5 275 50.5
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 4.7e-54 216.1 318 47.2
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 6.1e-54 215.7 445 41.3
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 8.0e-54 215.3 392 40.3
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 6.7e-53 212.2 296 46.3
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 8.8e-53 211.8 383 40.5
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 9.7e-52 208.4 363 42.1
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 1.3e-51 208.0 363 42.1
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 1.4e-50 204.5 306 49.0
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 1.8e-50 204.1 359 43.5
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 7.7e-49 198.7 386 44.0
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 1.3e-48 198.0 355 41.1
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 3.8e-48 196.4 387 43.4
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 5.0e-48 196.1 386 43.8
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 6.5e-48 195.7 388 42.8
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 6.5e-48 195.7 365 41.9
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 1.1e-47 194.9 258 47.7
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 1.9e-47 194.1 385 43.1
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 3.2e-47 193.4 334 41.3
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 9.4e-47 191.8 390 42.3
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.2e-46 191.4 390 41.3
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 1.6e-46 191.0 388 43.3
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 6.1e-46 189.1 372 37.9
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 1.4e-45 188.0 360 43.6
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 1.8e-45 187.6 368 41.0
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 4.0e-45 186.4 306 42.8
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 6.8e-45 185.7 289 46.7
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 2.6e-44 183.7 390 40.0
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 5.7e-44 182.6 386 37.3
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 3.7e-43 179.9 258 44.2
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 1.8e-42 177.6 303 39.9
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 1.0e-40 171.8 389 39.6
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 8.5e-40 168.7 259 41.7
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 4.7e-38 162.9 367 39.8
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 8.0e-38 162.2 362 38.1
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 3.0e-37 160.2 352 37.2
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 2.6e-36 157.1 362 37.6
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 3.4e-36 156.8 251 47.0
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 1.7e-35 154.5 310 35.5
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 2.8e-35 153.7 359 35.7
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 6.3e-35 152.5 364 36.0
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 3.1e-34 150.2 282 43.3
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 4.1e-34 149.8 306 37.3
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 6.1e-30 136.0 253 42.3
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.0e-28 131.0 363 36.4
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 3.4e-28 130.2 288 36.5
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 1.7e-27 127.9 169 56.8
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 1.0e-24 118.6 265 36.6
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 2.6e-20 104.0 186 40.9
Lsat_1_v5_gn_5_82561 Lactuca sativa HOM05D004981 ORTHO05D005635 1.6e-17 94.7 75 72.0
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 5.0e-16 89.7 229 35.8
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 7.3e-15 85.9 277 33.6
VMungo1383G0650 Vigna mungo HOM05D004981 ORTHO05D005635 1.8e-13 81.3 132 44.7
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 3.1e-13 80.5 86 51.2
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 6.8e-13 79.3 177 36.2
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.9e-11 73.9 81 54.3
Lsat_1_v5_gn_5_14961 Lactuca sativa HOM05D004981 ORTHO05D005635 1.4e-10 71.6 176 40.9
PRCOL_00000241 Prasinoderma coloniale HOM05D004981 ORTHO05D005635 5.4e-10 69.7 264 25.4
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 2.3e-08 64.3 104 36.5


User provided reference genes

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