Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021830 Daucus carota HOM05D007736 ORTHO05D009783 9.6e-256 886.3 452 100.0
Dinv24237 Davidia involucrata HOM05D007736 ORTHO05D009783 1.3e-55 221.5 334 40.1
Cc02_g21990 Coffea canephora HOM05D007736 ORTHO05D009783 3.6e-53 213.4 279 41.9
Actinidia38961 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.1e-52 211.8 293 41.6
Dinv19331 Davidia involucrata HOM05D007736 ORTHO05D009783 5.3e-52 209.5 495 31.5
Rhsim11G0133400 Rhododendron simsii HOM05D007736 ORTHO05D009783 8.4e-50 202.2 284 43.3
Lj5P244T47 Lonicera japonica HOM05D007736 ORTHO05D009783 3.9e-47 193.4 276 40.9
Cfa021836 Carpinus fangiana HOM05D007736 ORTHO05D009783 1.9e-46 191.0 227 44.1
Haze_10792 Corylus avellana HOM05D007736 ORTHO05D009783 2.5e-46 190.7 227 44.1
CiPaw.05G040000 Carya illinoinensis HOM05D007736 ORTHO05D009783 1.6e-45 188.0 242 42.6
PGSC0003DMG400029771 Solanum tuberosum HOM05D007736 ORTHO05D009783 3.6e-45 186.8 247 41.7
vmacro01801 Vaccinium macrocarpon HOM05D007736 ORTHO05D009783 2.4e-44 184.1 276 42.4
Solyc01g104790.4 Solanum lycopersicum HOM05D007736 ORTHO05D009783 1.5e-43 181.4 250 40.8
Eucgr.I02697 Eucalyptus grandis HOM05D007736 ORTHO05D009783 1.7e-42 177.9 253 42.3
CAN.G523.104 Capsicum annuum HOM05D007736 ORTHO05D009783 8.4e-42 175.6 286 37.1
Potri.012G020400 Populus trichocarpa HOM05D007736 ORTHO05D009783 8.4e-42 175.6 374 34.5
Nitab4.5_0000249g0440 Nicotiana tabacum HOM05D007736 ORTHO05D009783 1.9e-41 174.5 259 40.5
Sopen01g047310 Solanum pennellii HOM05D007736 ORTHO05D009783 1.9e-41 174.5 241 39.8
Sc16g0009620 Simmondsia chinensis HOM05D007736 ORTHO05D009783 3.2e-41 173.7 409 33.7
Thecc.02G144400 Theobroma cacao HOM05D007736 ORTHO05D009783 4.2e-41 173.3 215 40.9
COL.COLO4_20877 Corchorus olitorius HOM05D007736 ORTHO05D009783 5.4e-41 172.9 233 41.2
Actinidia00233 Actinidia chinensis HOM05D007736 ORTHO05D009783 1.2e-40 171.8 183 48.1
MSTRG.27826 Avicennia marina HOM05D007736 ORTHO05D009783 1.6e-40 171.4 237 39.7
MELO3C028798.2 Cucumis melo HOM05D007736 ORTHO05D009783 2.7e-40 170.6 236 39.8
CsaV3_7G022310 Cucumis sativus L. HOM05D007736 ORTHO05D009783 6.0e-40 169.5 236 39.4
Nitab4.5_0014357g0010 Nicotiana tabacum HOM05D007736 ORTHO05D009783 7.9e-40 169.1 266 39.5
ClCG09G014560 Citrullus lanatus HOM05D007736 ORTHO05D009783 1.0e-39 168.7 245 38.8
QL11p018598 Quercus lobata HOM05D007736 ORTHO05D009783 1.8e-39 167.9 331 35.0
Lsat_1_v5_gn_5_106541 Lactuca sativa HOM05D007736 ORTHO05D009783 3.9e-39 166.8 237 42.6
Sed0013332 Sechium edule HOM05D007736 ORTHO05D009783 8.7e-39 165.6 225 40.4
Sed0025125 Sechium edule HOM05D007736 ORTHO05D009783 1.1e-38 165.2 279 36.6
TWI14G1332 Tripterygium wilfordii HOM05D007736 ORTHO05D009783 4.3e-38 163.3 409 30.8
Manes.04G057900 Manihot esculenta HOM05D007736 ORTHO05D009783 2.8e-37 160.6 235 40.9
Glyma.15G050700 Glycine max HOM05D007736 ORTHO05D009783 3.7e-37 160.2 253 38.3
Hund21796 Selenicereus undatus HOM05D007736 ORTHO05D009783 4.8e-37 159.8 249 41.4
VMungo0540G1970 Vigna mungo HOM05D007736 ORTHO05D009783 4.8e-37 159.8 252 41.3
Potri.015G008200 Populus trichocarpa HOM05D007736 ORTHO05D009783 6.2e-37 159.5 388 33.2
Phvul.006G209200 Phaseolus vulgaris HOM05D007736 ORTHO05D009783 1.1e-36 158.7 260 37.7
HanXRQChr16g0514111 Helianthus annuus HOM05D007736 ORTHO05D009783 1.8e-36 157.9 226 42.5
Cpa.g.sc2.48 Carica papaya HOM05D007736 ORTHO05D009783 2.4e-36 157.5 314 32.8
Sabra12G0012700 Salix brachista HOM05D007736 ORTHO05D009783 9.0e-36 155.6 380 31.8
EL10Ac4g09677 Beta vulgaris HOM05D007736 ORTHO05D009783 1.2e-35 155.2 307 36.8
Sabra15G0006300 Salix brachista HOM05D007736 ORTHO05D009783 2.2e-34 151.0 392 31.1
Ah.06g188730 Amaranthus hybridus HOM05D007736 ORTHO05D009783 2.9e-34 150.6 261 39.1
MSTRG.5252 Avicennia marina HOM05D007736 ORTHO05D009783 3.2e-33 147.1 284 39.4
PGR142G3153 Punica granatum HOM05D007736 ORTHO05D009783 4.6e-32 143.3 234 35.5
AUR62006887 Chenopodium quinoa HOM05D007736 ORTHO05D009783 6.0e-32 142.9 247 40.1
arahy.Tifrunner.gnm1.ann1.JZ71MD Arachis hypogaea HOM05D007736 ORTHO05D009783 1.3e-31 141.7 246 35.8
arahy.Tifrunner.gnm1.ann1.40XV2D Arachis hypogaea HOM05D007736 ORTHO05D009783 5.1e-31 139.8 246 35.8
Migut.N01016 Erythranthe guttata HOM05D007736 ORTHO05D009783 5.1e-31 139.8 262 34.4
Lj6g0003665 Lotus japonicus HOM05D007736 ORTHO05D009783 1.5e-30 138.3 249 34.9
AUR62000538 Chenopodium quinoa HOM05D007736 ORTHO05D009783 1.9e-30 137.9 247 39.3
TAR625G1059 Trochodendron aralioides HOM05D007736 ORTHO05D009783 1.9e-30 137.9 540 25.6
Medtr2g008130 Medicago truncatula HOM05D007736 ORTHO05D009783 3.3e-30 137.1 250 34.0
Ca_00110_v3 Cicer arietinum L. HOM05D007736 ORTHO05D009783 5.7e-30 136.3 247 34.4
Glyma.08G181600 Glycine max HOM05D007736 ORTHO05D009783 1.6e-29 134.8 309 32.4
ECA234G2384 Erigeron canadensis HOM05D007736 ORTHO05D009783 6.2e-29 132.9 249 37.8
Psat1g218640 Pisum sativum HOM05D007736 ORTHO05D009783 1.8e-28 131.3 401 27.4
unitig_26.g9583 Utricularia gibba HOM05D007736 ORTHO05D009783 1.8e-28 131.3 160 42.5
Ciclev10028677m.g Citrus clementina HOM05D007736 ORTHO05D009783 4.2e-25 120.2 280 31.4
HanXRQChr10g0289121 Helianthus annuus HOM05D007736 ORTHO05D009783 1.6e-24 118.2 232 34.9
Atru.chr6.1122 Acer truncatum HOM05D007736 ORTHO05D009783 6.7e-23 112.8 371 28.3
FAN02G1431 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.5e-22 111.7 156 39.7
FAN14G5928 Fragaria x ananassa HOM05D007736 ORTHO05D009783 1.9e-22 111.3 118 44.9
Nn1g06123 Nelumbo nucifera HOM05D007736 ORTHO05D009783 1.9e-22 111.3 119 46.2
FvH4_6g01062 Fragaria vesca HOM05D000868 ORTHO05D000711 2.5e-22 110.9 118 44.9
RcHm_v2.0_Chr3g0448601 Rosa chinensis HOM05D007736 ORTHO05D009783 2.5e-22 110.9 125 44.0
FAN09G0667 Fragaria x ananassa HOM05D007736 ORTHO05D009783 4.3e-22 110.2 157 40.1
FAN05G0537 Fragaria x ananassa HOM05D007736 ORTHO05D009783 7.4e-22 109.4 118 44.1
Prupe.7G056800 Prunus persica HOM05D007736 ORTHO05D009783 2.2e-21 107.8 182 36.8
TPR.G19753 Trifolium pratense HOM05D007736 ORTHO05D009783 2.2e-21 107.8 197 33.0
FAN05G0165 Fragaria x ananassa HOM05D007736 ORTHO05D009783 8.2e-21 105.9 118 43.2
CDE02G1981 Ceratophyllum demersum HOM05D007736 ORTHO05D009783 1.4e-20 105.1 232 33.6
Prupe.6G356600 Prunus persica HOM05D007736 ORTHO05D009783 4.1e-20 103.6 133 40.6
MD12G1255900 Malus domestica HOM05D007736 ORTHO05D009783 1.2e-19 102.1 149 39.6
Lalb_Chr20g0123201 Lupinus albus HOM05D007736 ORTHO05D009783 1.5e-19 101.7 277 31.0
SGA_v2.0_scaffold45G17286 Striga asiatica HOM05D007736 ORTHO05D009783 2.6e-19 100.9 213 31.5
MD04G1236600 Malus domestica HOM05D007736 ORTHO05D009783 4.5e-19 100.1 201 37.3
Os06g0468400 Oryza sativa ssp. japonica HOM05D007736 ORTHO05D009783 6.7e-15 86.3 208 35.1
TAR381G1413 Trochodendron aralioides HOM05D007736 ORTHO05D009783 6.7e-15 86.3 139 41.0
Zm00001eb382360 Zea mays HOM05D007736 ORTHO05D009783 1.3e-13 82.0 207 33.8
ATR0772G143 Amborella trichopoda HOM05D007736 ORTHO05D009783 8.2e-13 79.3 412 24.0
Aqoxy5G02135 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 2.4e-12 77.8 431 23.4
HPP92_001092 Vanilla planifolia HOM05D007736 ORTHO05D009783 5.3e-12 76.6 279 28.0
Aqoxy4G00650 Aquilegia oxysepala HOM05D007736 ORTHO05D009783 6.9e-12 76.3 404 24.3
Oeu012723.3 Olea europaea HOM05D007736 ORTHO05D009783 2.7e-08 64.3 174 33.3
Peaxi162Scf01290g00019 Petunia axillaris HOM05D007736 ORTHO05D009783 1.0e-07 62.4 171 29.2


User provided reference genes

Program Settings