Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021801 Daucus carota HOM05D007835 ORTHO05D008482 1.4e-72 276.2 139 100.0
Dinv33326 Davidia involucrata HOM05D007835 ORTHO05D008482 3.2e-16 89.0 139 45.3
COL.COLO4_13280 Corchorus olitorius HOM05D007835 ORTHO05D008482 6.0e-15 84.7 134 41.8
Duzib147G1374 Durio zibethinus HOM05D007835 ORTHO05D008482 7.8e-15 84.3 135 45.9
CiPaw.04G038800 Carya illinoinensis HOM05D007835 ORTHO05D008482 3.0e-14 82.4 149 43.6
CiPaw.03G057300 Carya illinoinensis HOM05D007835 ORTHO05D008482 3.9e-14 82.0 136 46.3
Peaxi162Scf00420g00521 Petunia axillaris HOM05D011578 ORTHO05D008482 6.6e-14 81.3 163 39.3
GSVIVG01033066001 Vitis vinifera HOM05D007835 ORTHO05D008482 8.7e-14 80.9 134 42.5
Nitab4.5_0002050g0020 Nicotiana tabacum HOM05D011578 ORTHO05D008482 2.5e-13 79.3 160 40.0
Thecc.04G039400 Theobroma cacao HOM05D007835 ORTHO05D008482 7.3e-13 77.8 135 40.0
Peaxi162Scf00064g00114 Petunia axillaris HOM05D011578 ORTHO05D008482 9.6e-13 77.4 146 39.0
Ciclev10017736m.g Citrus clementina HOM05D007835 ORTHO05D008482 2.8e-12 75.9 145 42.8
Actinidia05895 Actinidia chinensis HOM05D007835 ORTHO05D008482 3.6e-12 75.5 130 37.7
Atru.chr6.2588 Acer truncatum HOM05D007835 ORTHO05D008482 1.4e-11 73.6 144 41.7
Manes.17G102100 Manihot esculenta HOM05D007835 ORTHO05D008482 3.1e-11 72.4 138 42.8
Potri.001G328300 Populus trichocarpa HOM05D007835 ORTHO05D008482 4.0e-11 72.0 137 42.3
Nitab4.5_0007375g0010 Nicotiana tabacum HOM05D011578 ORTHO05D008482 6.9e-11 71.2 164 36.6
QL02p071044 Quercus lobata HOM05D007835 ORTHO05D008482 9.0e-11 70.9 134 43.3
Gohir.A05G337200 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.2e-10 70.5 132 37.9
Prupe.3G308000 Prunus persica HOM05D007835 ORTHO05D008482 1.2e-10 70.5 137 38.0
PGR142G0702 Punica granatum HOM05D007835 ORTHO05D008482 1.5e-10 70.1 131 41.2
Aqoxy5G03319 Aquilegia oxysepala HOM05D007835 ORTHO05D008482 2.6e-10 69.3 145 42.1
Gohir.1Z049371 Gossypium hirsutum HOM05D007835 ORTHO05D008482 4.4e-10 68.6 137 40.1
Gohir.A09G036865 Gossypium hirsutum HOM05D007835 ORTHO05D008482 4.4e-10 68.6 137 40.1
Gohir.A09G036900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 4.4e-10 68.6 137 40.1
Gohir.D09G038100 Gossypium hirsutum HOM05D007835 ORTHO05D008482 9.9e-10 67.4 137 39.4
Gorai.006G043500 Gossypium raimondii HOM05D007835 ORTHO05D008482 9.9e-10 67.4 137 39.4
CAN.G473.112 Capsicum annuum HOM05D011578 ORTHO05D008482 1.3e-09 67.0 145 34.5
CANSAT64G0845 Cannabis sativa HOM05D007835 ORTHO05D008482 1.7e-09 66.6 147 42.9
Lsat_1_v5_gn_0_2801 Lactuca sativa HOM05D007835 ORTHO05D008482 1.7e-09 66.6 132 34.1
Actinidia36209 Actinidia chinensis HOM05D007835 ORTHO05D008482 2.9e-09 65.9 144 36.1
PGSC0003DMG400020208 Solanum tuberosum HOM05D011578 ORTHO05D008482 2.9e-09 65.9 147 36.7
PGSC0003DMG400030199 Solanum tuberosum HOM05D011578 ORTHO05D008482 2.9e-09 65.9 163 33.7
Cfa007213 Carpinus fangiana HOM05D007835 ORTHO05D008482 3.8e-09 65.5 137 42.3
Gorai.012G085600 Gossypium raimondii HOM05D007835 ORTHO05D008482 3.8e-09 65.5 128 36.7
Migut.F00053 Erythranthe guttata HOM05D007835 ORTHO05D008482 4.9e-09 65.1 151 36.4
Gohir.D04G075900 Gossypium hirsutum HOM05D007835 ORTHO05D008482 4.9e-09 65.1 128 36.7
Solyc02g094240.1 Solanum lycopersicum HOM05D011578 ORTHO05D008482 8.4e-09 64.3 126 37.3
Gohir.A07G229800 Gossypium hirsutum HOM05D007835 ORTHO05D008482 1.9e-08 63.2 130 35.4
Eucgr.I01634 Eucalyptus grandis HOM05D007835 ORTHO05D008482 2.4e-08 62.8 136 37.5
Gohir.D07G237000 Gossypium hirsutum HOM05D007835 ORTHO05D008482 2.4e-08 62.8 129 34.9
Gorai.001G272900 Gossypium raimondii HOM05D007835 ORTHO05D008482 2.4e-08 62.8 129 34.9
Sopen02g038870 Solanum pennellii HOM05D011578 ORTHO05D008482 3.2e-08 62.4 125 33.6
Potri.017G065916 Populus trichocarpa HOM05D007835 ORTHO05D008482 4.2e-08 62.0 130 40.0
Sabra16G0210200 Salix brachista HOM05D007835 ORTHO05D008482 5.4e-08 61.6 149 41.6
ECA246G4812 Erigeron canadensis HOM05D007835 ORTHO05D008482 7.1e-08 61.2 114 38.6
Sopen02g017270 Solanum pennellii HOM05D011578 ORTHO05D008482 7.1e-08 61.2 173 35.3
AUR62003426 Chenopodium quinoa HOM05D007835 ORTHO05D008482 9.3e-08 60.8 132 34.1
FAN02G2327 Fragaria x ananassa HOM05D007835 ORTHO05D008482 9.3e-08 60.8 137 37.2
FAN09G2005 Fragaria x ananassa HOM05D007835 ORTHO05D008482 9.3e-08 60.8 137 37.2
Sabra17G0058300 Salix brachista HOM05D007835 ORTHO05D008482 9.3e-08 60.8 131 40.5
Solyc02g094230.1 Solanum lycopersicum HOM05D011578 ORTHO05D008482 9.3e-08 60.8 135 34.8
Eucgr.I01635 Eucalyptus grandis HOM05D007835 ORTHO05D008482 1.2e-07 60.5 136 36.0
TAR374G0487 Trochodendron aralioides HOM05D007835 ORTHO05D008482 1.2e-07 60.5 125 38.4
PGSC0003DMG400020207 Solanum tuberosum HOM05D011578 ORTHO05D008482 1.6e-07 60.1 130 34.6
TAR371G0995 Trochodendron aralioides HOM05D007835 ORTHO05D008482 1.6e-07 60.1 125 42.4
Oeu048907.1 Olea europaea HOM05D007835 ORTHO05D008482 2.7e-07 59.3 155 34.8
Solyc02g068170.1 Solanum lycopersicum HOM05D011578 ORTHO05D008482 2.7e-07 59.3 164 32.9
TAR629G3113 Trochodendron aralioides HOM05D007835 ORTHO05D008482 2.7e-07 59.3 133 38.3
FvH4_6g53750 Fragaria vesca HOM05D007835 ORTHO05D008482 7.9e-07 57.8 138 37.0
FAN05G3731 Fragaria x ananassa HOM05D007835 ORTHO05D008482 7.9e-07 57.8 138 37.0
FAN14G4618 Fragaria x ananassa HOM05D007835 ORTHO05D008482 7.9e-07 57.8 138 37.0
Haze_14890 Corylus avellana HOM05D007835 ORTHO05D008482 1.7e-06 56.6 120 42.5
RcHm_v2.0_Chr2g0175871 Rosa chinensis HOM05D007835 ORTHO05D008482 2.3e-06 56.2 142 36.6
Lj1g0016807 Lotus japonicus HOM05D007835 ORTHO05D008482 5.1e-06 55.1 132 35.6


User provided reference genes

Program Settings