Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021781 Daucus carota HOM05D008040 ORTHO05D010075 2.2e-182 642.1 309 100.0
QL04p017640 Quercus lobata HOM05D008040 ORTHO05D010075 2.3e-27 127.1 230 34.3
QL04p017690 Quercus lobata HOM05D008040 ORTHO05D010075 4.0e-27 126.3 230 33.9
Potri.013G110300 Populus trichocarpa HOM05D008040 ORTHO05D010075 4.3e-21 106.3 239 29.7
EL10Ac2g04156 Beta vulgaris HOM05D008040 ORTHO05D010075 1.2e-20 104.8 231 32.9
Potri.013G109900 Populus trichocarpa HOM05D008040 ORTHO05D010075 4.7e-20 102.8 239 29.7
TWI12G0410 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 3.1e-19 100.1 265 31.3
AUR62017713 Chenopodium quinoa HOM05D008040 ORTHO05D010075 3.4e-18 96.7 222 30.6
FAN19G2662 Fragaria x ananassa HOM05D008040 ORTHO05D010075 3.4e-18 96.7 223 30.5
Oeu009728.1 Olea europaea HOM05D008040 ORTHO05D010075 7.6e-18 95.5 232 30.2
CSS0016313 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 9.9e-18 95.1 241 30.7
CSS0013591 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.3e-17 94.7 249 31.7
RcHm_v2.0_Chr2g0102901 Rosa chinensis HOM05D008040 ORTHO05D010075 1.7e-17 94.4 225 29.8
TWI77G0815 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 1.7e-17 94.4 254 29.5
Oeu009732.1 Olea europaea HOM05D001586 ORTHO05D001543 2.2e-17 94.0 231 28.1
TWI12G0677 Tripterygium wilfordii HOM05D008040 ORTHO05D010075 8.4e-17 92.0 260 28.1
CSS0010874 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 1.1e-16 91.7 240 30.8
COL.COLO4_30844 Corchorus olitorius HOM05D008040 ORTHO05D010075 3.2e-16 90.1 227 26.9
COL.COLO4_12486 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.2e-15 88.2 236 26.7
COL.COLO4_31566 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.2e-15 88.2 210 28.1
QL04p017704 Quercus lobata HOM05D008040 ORTHO05D010075 2.1e-15 87.4 193 30.6
Sabra08G0010200 Salix brachista HOM05D008040 ORTHO05D010075 6.0e-15 85.9 237 30.8
RcHm_v2.0_Chr2g0102561 Rosa chinensis HOM05D008040 ORTHO05D010075 7.8e-15 85.5 272 27.9
AUR62008579 Chenopodium quinoa HOM05D008040 ORTHO05D010075 1.0e-14 85.1 200 31.0
FvH4_1g14071 Fragaria vesca HOM05D008040 ORTHO05D010075 1.0e-14 85.1 234 29.5
FAN19G2417 Fragaria x ananassa HOM05D008040 ORTHO05D010075 1.3e-14 84.7 234 29.5
Potri.013G109701 Populus trichocarpa HOM05D008040 ORTHO05D010075 2.3e-14 84.0 213 28.2
AUR62035995 Chenopodium quinoa HOM05D008040 ORTHO05D010075 3.9e-14 83.2 204 28.4
FAN26G0836 Fragaria x ananassa HOM05D008040 ORTHO05D010075 6.6e-14 82.4 234 28.6
PSO339G3463 Papaver somniferum HOM05D008040 ORTHO05D010075 1.5e-13 81.3 211 32.2
COL.COLO4_10414 Corchorus olitorius HOM05D008040 ORTHO05D010075 4.3e-13 79.7 236 26.7
FAN23G2403 Fragaria x ananassa HOM05D008040 ORTHO05D010075 9.6e-13 78.6 213 29.6
COL.COLO4_31564 Corchorus olitorius HOM05D008040 ORTHO05D010075 1.6e-12 77.8 145 31.0
Ah.07g206250 Amaranthus hybridus HOM05D008040 ORTHO05D010075 4.7e-12 76.3 190 30.0
CSS0049849 Camellia sinensis var. sinensis HOM05D008040 ORTHO05D010075 6.2e-12 75.9 206 27.7
Nitab4.5_0005142g0030 Nicotiana tabacum HOM05D008040 ORTHO05D010075 1.8e-11 74.3 190 31.1
Oeu045297.1 Olea europaea HOM05D008040 ORTHO05D010075 4.0e-11 73.2 188 28.7
Ah.06g196070 Amaranthus hybridus HOM05D008040 ORTHO05D010075 1.2e-10 71.6 241 28.2
Ah.02g122840 Amaranthus hybridus HOM05D008040 ORTHO05D010075 5.8e-10 69.3 190 28.9
MBI01_g31985_MAGBIO Magnolia biondii HOM05D000664 ORTHO05D000491 7.6e-10 68.9 215 29.8
Ciclev10026974m.g Citrus clementina HOM05D008040 ORTHO05D010075 1.3e-09 68.2 225 27.6
SGA_v2.0_scaffold286G47115 Striga asiatica HOM05D008040 ORTHO05D010075 2.9e-09 67.0 246 24.4
SGA_v2.0_scaffold286G47111 Striga asiatica HOM05D008040 ORTHO05D010075 3.8e-09 66.6 234 23.1
Dinv38297 Davidia involucrata HOM05D004446 ORTHO05D005346 4.9e-09 66.2 215 27.4
Ciclev10020526m.g Citrus clementina HOM05D002420 ORTHO05D002422 6.4e-09 65.9 217 26.3
Manes.09G072126 Manihot esculenta HOM05D008040 ORTHO05D010075 6.4e-09 65.9 205 25.4
Nitab4.5_0001552g0010 Nicotiana tabacum HOM05D008040 ORTHO05D010075 2.4e-08 63.9 137 30.7
Atru.chr9.129 Acer truncatum HOM05D002420 ORTHO05D002422 9.3e-08 62.0 226 26.1
Ciclev10006596m.g Citrus clementina HOM05D008040 ORTHO05D010075 1.2e-07 61.6 212 23.6
DCAR_014748 Daucus carota HOM05D002420 ORTHO05D002422 2.7e-07 60.5 188 27.7
Aqoxy6G00905 Aquilegia oxysepala HOM05D008040 ORTHO05D010075 4.6e-07 59.7 146 30.1
Lalb_Chr16g0386521 Lupinus albus HOM05D002420 ORTHO05D002422 1.3e-06 58.2 242 25.2
Manes.05G199200 Manihot esculenta HOM05D002420 ORTHO05D002422 1.3e-06 58.2 213 24.4
PSO384G2442 Papaver somniferum HOM05D008326 ORTHO05D001155 1.7e-06 57.8 195 25.6
Migut.O00261 Erythranthe guttata HOM05D002420 ORTHO05D002422 3.0e-06 57.0 190 27.4
vmacro17323 Vaccinium macrocarpon HOM05D008040 ORTHO05D010075 3.0e-06 57.0 158 30.4


User provided reference genes

Program Settings