Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021727 Daucus carota HOM05D005844 ORTHO05D007203 1.6e-126 456.1 220 100.0
Actinidia36121 Actinidia chinensis HOM05D005844 ORTHO05D007203 1.1e-103 380.2 221 81.9
Dinv09631 Davidia involucrata HOM05D005844 ORTHO05D007203 1.1e-103 380.2 221 81.0
GSVIVG01032391001 Vitis vinifera HOM05D005844 ORTHO05D007203 1.1e-103 380.2 221 82.4
Dinv33434 Davidia involucrata HOM05D005844 ORTHO05D007203 2.4e-103 379.0 221 81.0
Actinidia05987 Actinidia chinensis HOM05D005844 ORTHO05D007203 9.3e-103 377.1 221 81.4
Aqoxy5G03753 Aquilegia oxysepala HOM05D005844 ORTHO05D007203 1.2e-102 376.7 221 79.2
CSS0012729 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 1.6e-102 376.3 220 79.1
Ciclev10016139m.g Citrus clementina HOM05D005844 ORTHO05D007203 1.6e-102 376.3 221 79.2
Hma1.2p1_2550F.1_g324230 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 4.6e-102 374.8 221 80.1
Thecc.04G018700 Theobroma cacao HOM05D005844 ORTHO05D007203 3.0e-101 372.1 221 77.8
ECA247G4055 Erigeron canadensis HOM05D005844 ORTHO05D007203 5.1e-101 371.3 220 78.2
HanXRQChr02g0043121 Helianthus annuus HOM05D005844 ORTHO05D007203 8.7e-101 370.5 220 79.1
RcHm_v2.0_Chr2g0173161 Rosa chinensis HOM05D005844 ORTHO05D007203 1.1e-100 370.2 221 78.3
Rhsim10G0015300 Rhododendron simsii HOM05D005844 ORTHO05D007203 1.9e-100 369.4 221 80.1
Rhsim10G0016000 Rhododendron simsii HOM05D005844 ORTHO05D007203 1.9e-100 369.4 221 80.1
Nn4g22606 Nelumbo nucifera HOM05D005844 ORTHO05D007203 2.5e-100 369.0 220 77.3
PGSC0003DMG400012605 Solanum tuberosum HOM05D005844 ORTHO05D007203 2.5e-100 369.0 221 79.2
Cfa007347 Carpinus fangiana HOM05D005844 ORTHO05D007203 4.3e-100 368.2 221 79.2
CiPaw.03G045000 Carya illinoinensis HOM05D005844 ORTHO05D007203 4.3e-100 368.2 221 79.2
Sc16g0003190 Simmondsia chinensis HOM05D005844 ORTHO05D007203 7.3e-100 367.5 220 78.6
Solyc02g093390.4 Solanum lycopersicum HOM05D005844 ORTHO05D007203 7.3e-100 367.5 221 78.3
Cc07_g01570 Coffea canephora HOM05D005844 ORTHO05D007203 1.6e-99 366.3 221 76.9
vmacro05871 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 3.6e-99 365.2 231 76.6
Dinv07356 Davidia involucrata HOM05D005844 ORTHO05D007203 4.8e-99 364.8 249 71.9
TWI56G0011 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 8.1e-99 364.0 221 76.9
Sopen02g037980 Solanum pennellii HOM05D005844 ORTHO05D007203 1.4e-98 363.2 221 77.4
FAN05G4937 Fragaria x ananassa HOM05D005844 ORTHO05D007203 2.4e-98 362.5 221 77.4
SalBow7G1242 Salvia bowleyana HOM05D005844 ORTHO05D007203 3.1e-98 362.1 220 79.1
Duzib187G1685 Durio zibethinus HOM05D005844 ORTHO05D007203 4.0e-98 361.7 221 76.5
Migut.K01404 Erythranthe guttata HOM05D005844 ORTHO05D007203 4.0e-98 361.7 220 79.1
Nitab4.5_0003318g0030 Nicotiana tabacum HOM05D005844 ORTHO05D007203 5.3e-98 361.3 221 78.3
QL02p074142 Quercus lobata HOM05D005844 ORTHO05D007203 6.9e-98 360.9 220 75.9
COL.COLO4_29165 Corchorus olitorius HOM05D005844 ORTHO05D007203 1.2e-97 360.1 221 76.0
CANSAT64G0956 Cannabis sativa HOM05D005844 ORTHO05D007203 2.0e-97 359.4 226 76.1
MD17G1023500 Malus domestica HOM05D005844 ORTHO05D007203 2.6e-97 359.0 221 76.0
ClCG09G019300 Citrullus lanatus HOM05D005844 ORTHO05D007203 4.4e-97 358.2 221 75.6
Potri.001G344000 Populus trichocarpa HOM05D005844 ORTHO05D007203 4.4e-97 358.2 221 77.4
MSTRG.3288 Avicennia marina HOM05D005844 ORTHO05D007203 7.6e-97 357.5 220 76.4
CsaV3_5G027090 Cucumis sativus L. HOM05D005844 ORTHO05D007203 9.9e-97 357.1 221 74.7
Gohir.A05G355200 Gossypium hirsutum HOM05D005844 ORTHO05D007203 1.7e-96 356.3 221 75.6
Prupe.3G293000 Prunus persica HOM05D005844 ORTHO05D007203 2.2e-96 355.9 221 76.0
PGR142G0612 Punica granatum HOM05D005844 ORTHO05D007203 2.2e-96 355.9 221 76.5
Gohir.D04G058000 Gossypium hirsutum HOM05D005844 ORTHO05D007203 2.9e-96 355.5 221 75.1
FAN14G2428 Fragaria x ananassa HOM05D005844 ORTHO05D007203 3.8e-96 355.1 221 76.5
FAN09G1449 Fragaria x ananassa HOM05D005844 ORTHO05D007203 4.9e-96 354.8 221 76.0
Gorai.012G064700 Gossypium raimondii HOM05D005844 ORTHO05D007203 6.4e-96 354.4 221 74.7
THA.LOC104823955 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 6.4e-96 354.4 221 75.1
Cpa.g.c26638.3 Carica papaya HOM05D005844 ORTHO05D007203 1.4e-95 353.2 220 74.5
FvH4_6g51630 Fragaria vesca HOM05D005844 ORTHO05D007203 1.4e-95 353.2 221 76.0
Phvul.004G044500 Phaseolus vulgaris HOM05D005844 ORTHO05D007203 4.2e-95 351.7 221 74.2
THA.LOC104805364 Tarenaya hassleriana HOM05D005844 ORTHO05D007203 4.2e-95 351.7 222 73.9
TWI36G0829 Tripterygium wilfordii HOM05D005844 ORTHO05D007203 4.2e-95 351.7 221 72.9
FAN02G1237 Fragaria x ananassa HOM05D005844 ORTHO05D007203 7.1e-95 350.9 221 75.1
SGA_v2.0_scaffold18G08274 Striga asiatica HOM05D005844 ORTHO05D007203 7.1e-95 350.9 222 73.9
PSO407G0181 Papaver somniferum HOM05D005844 ORTHO05D007203 1.2e-94 350.1 221 75.6
Lj1g0026070 Lotus japonicus HOM05D005844 ORTHO05D007203 2.1e-94 349.4 220 73.6
Medtr2g062880 Medicago truncatula HOM05D005844 ORTHO05D007203 7.9e-94 347.4 221 75.1
PSO111G0092 Papaver somniferum HOM05D005844 ORTHO05D007203 3.0e-93 345.5 221 75.1
Sabra16G0223300 Salix brachista HOM05D005844 ORTHO05D007203 3.9e-93 345.1 238 72.7
Eucgr.I01735 Eucalyptus grandis HOM05D005844 ORTHO05D007203 5.1e-93 344.7 221 72.4
Nitab4.5_0001860g0130 Nicotiana tabacum HOM05D005844 ORTHO05D007203 5.1e-93 344.7 214 77.1
unitig_46.g18705 Utricularia gibba HOM05D005844 ORTHO05D007203 6.6e-93 344.4 220 75.0
Carub.0007s3499 Capsella rubella HOM05D005844 ORTHO05D007203 1.5e-92 343.2 221 73.3
Medtr7g033530 Medicago truncatula HOM05D005844 ORTHO05D007203 2.5e-92 342.4 220 72.7
arahy.Tifrunner.gnm1.ann1.RG8FT8 Arachis hypogaea HOM05D005844 ORTHO05D007203 3.3e-92 342.0 220 72.7
VMungo0464G1123 Vigna mungo HOM05D005844 ORTHO05D007203 3.3e-92 342.0 221 71.9
AT5G40530 Arabidopsis thaliana HOM05D005844 ORTHO05D007203 7.4e-92 340.9 221 72.9
Zm00001eb205620 Zea mays HOM05D005844 ORTHO05D007203 2.8e-91 339.0 220 71.4
Aa31LG9G1090 Aethionema arabicum HOM05D005844 ORTHO05D007203 4.8e-91 338.2 221 72.4
ATR0824G194 Amborella trichopoda HOM05D005844 ORTHO05D007203 4.8e-91 338.2 221 71.9
AL7G49290 Arabidopsis lyrata HOM05D005844 ORTHO05D007203 4.8e-91 338.2 221 72.4
BcaB06g27527 Brassica carinata HOM05D005844 ORTHO05D007203 4.8e-91 338.2 221 72.4
Lalb_Chr08g0243241 Lupinus albus HOM05D005844 ORTHO05D007203 4.8e-91 338.2 221 71.9
CSS0002651 Camellia sinensis var. sinensis HOM05D005844 ORTHO05D007203 6.2e-91 337.8 220 73.2
Thhalv10027875m.g Eutrema salsugineum HOM05D005844 ORTHO05D007203 1.4e-90 336.7 221 71.5
A04p13570 Brassica napus HOM05D005844 ORTHO05D007203 1.8e-90 336.3 221 71.9
Sp7g01340 Schrenkiella parvula HOM05D005844 ORTHO05D007203 1.8e-90 336.3 220 70.5
Manes.15G150500 Manihot esculenta HOM05D005844 ORTHO05D007203 5.3e-90 334.7 221 74.7
Os02g0593900 Oryza sativa ssp. japonica HOM05D005844 ORTHO05D007203 9.0e-90 334.0 220 70.0
C04p47350 Brassica napus HOM05D005844 ORTHO05D007203 2.0e-89 332.8 221 71.0
Haze_14753 Corylus avellana HOM05D005844 ORTHO05D007203 2.0e-89 332.8 251 65.7
BcaB02g07945 Brassica carinata HOM05D005844 ORTHO05D007203 4.5e-89 331.6 221 71.0
Cfa007344 Carpinus fangiana HOM05D005844 ORTHO05D007203 5.8e-89 331.3 234 70.5
MELO3C021585.2 Cucumis melo HOM05D005844 ORTHO05D007203 5.8e-89 331.3 220 70.5
PSO754G0028 Papaver somniferum HOM05D005844 ORTHO05D007203 7.9e-86 320.9 244 64.8
Psat4g044480 Pisum sativum HOM05D005844 ORTHO05D007203 7.9e-86 320.9 247 65.6
HPP92_020245 Vanilla planifolia HOM05D005844 ORTHO05D007203 1.5e-84 316.6 221 65.6
Lj7A600G48 Lonicera japonica HOM05D005844 ORTHO05D007203 1.2e-81 307.0 182 82.4
Sed0014974 Sechium edule HOM05D005844 ORTHO05D007203 1.5e-81 306.6 182 76.4
Glyma.19G056800 Glycine max HOM05D005844 ORTHO05D007203 2.6e-81 305.8 220 65.5
CDE09G0856 Ceratophyllum demersum HOM05D005844 ORTHO05D007203 2.9e-80 302.4 201 71.1
Pp3c18_8570 Physcomitrium patens HOM05D005844 ORTHO05D007203 5.5e-79 298.1 220 64.1
Ca_25854_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 6.0e-78 294.7 221 66.5
SMO169G0126 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 1.0e-77 293.9 221 63.8
Hma1.2p1_1747F.1_g300470 Hydrangea macrophylla HOM05D005844 ORTHO05D007203 1.3e-77 293.5 183 76.5
TAR629G2614 Trochodendron aralioides HOM05D005844 ORTHO05D007203 5.1e-77 291.6 165 79.4
AagrBONN_evm.TU.Sc2ySwM_344.1282 Anthoceros agrestis HOM05D005844 ORTHO05D007203 1.1e-76 290.4 222 63.1
Ca_08532_v3 Cicer arietinum L. HOM05D005844 ORTHO05D007203 1.1e-76 290.4 221 65.6
Glyma.16G069400 Glycine max HOM05D005844 ORTHO05D007203 4.3e-76 288.5 209 64.6
BolC4t26336H Brassica oleracea HOM05D005844 ORTHO05D007203 5.7e-76 288.1 202 67.3
BraA04t17017Z Brassica rapa HOM05D005844 ORTHO05D007203 5.7e-76 288.1 202 67.3
MBI06_g16054_MAGBIO Magnolia biondii HOM05D005844 ORTHO05D007203 1.3e-75 287.0 220 63.2
VMungo1215G2157 Vigna mungo HOM05D005844 ORTHO05D007203 2.8e-75 285.8 194 67.0
Peaxi162Scf00129g01647 Petunia axillaris HOM05D005844 ORTHO05D007203 6.3e-75 284.6 183 75.4
Lsat_1_v5_gn_1_11001 Lactuca sativa HOM05D005844 ORTHO05D007203 8.2e-75 284.3 174 78.2
arahy.Tifrunner.gnm1.ann1.V6CENM Arachis hypogaea HOM05D005844 ORTHO05D007203 2.4e-74 282.7 221 62.0
Mapoly0055s0119 Marchantia polymorpha HOM05D005844 ORTHO05D007203 2.0e-73 279.6 220 60.5
EL10Ac6g14092 Beta vulgaris HOM05D005844 ORTHO05D007203 7.6e-73 277.7 221 63.3
CBR_g37477 Chara braunii HOM05D005844 ORTHO05D007203 2.9e-72 275.8 219 60.7
CARHR261450 Cardamine hirsuta HOM05D005844 ORTHO05D007203 5.5e-71 271.6 179 73.7
CAN.G473.16 Capsicum annuum HOM05D005844 ORTHO05D007203 5.7e-68 261.5 163 77.3
Cfa007349 Carpinus fangiana HOM05D005844 ORTHO05D007203 1.6e-62 243.4 228 58.3
Ah.03g137020 Amaranthus hybridus HOM05D001812 ORTHO05D001874 6.7e-61 238.0 185 64.9
MCO16G365 Micromonas commoda HOM05D005844 ORTHO05D007203 1.4e-55 220.3 221 52.9
vmacro09039 Vaccinium macrocarpon HOM05D005844 ORTHO05D007203 9.4e-47 191.0 192 52.6
SHI16461 Sapria himalayana HOM05D005844 ORTHO05D007203 1.6e-46 190.3 312 37.8
Cre07.g323450 Chlamydomonas reinhardtii HOM05D005844 ORTHO05D007203 2.3e-45 186.4 261 41.0
Atru.chr6.2417 Acer truncatum HOM05D005844 ORTHO05D007203 3.3e-44 182.6 113 79.6
TPR.G1078 Trifolium pratense HOM05D005844 ORTHO05D007203 3.7e-43 179.1 110 70.9
TPR.G11046 Trifolium pratense HOM05D005844 ORTHO05D007203 4.1e-42 175.6 107 72.0
PRCOL_00001214 Prasinoderma coloniale HOM05D005844 ORTHO05D007203 5.9e-41 171.8 256 40.2
TPR.G35964 Trifolium pratense HOM05D005844 ORTHO05D007203 1.0e-40 171.0 113 77.0
TAR629G1250 Trochodendron aralioides HOM05D005844 ORTHO05D007203 2.3e-37 159.8 122 68.0
SMO202G0011 Selaginella moellendorffii HOM05D005844 ORTHO05D007203 3.2e-31 139.4 115 58.3
BolC4t27198H Brassica oleracea HOM05D005844 ORTHO05D007203 7.5e-28 128.3 125 55.2
Atru.chr2.3681 Acer truncatum HOM05D005844 ORTHO05D007203 1.7e-27 127.1 77 80.5
Cfa024741 Carpinus fangiana HOM05D005844 ORTHO05D007203 4.1e-26 122.5 193 35.8
Rhsim10G0015100 Rhododendron simsii HOM05D014363 ORTHO05D019497 5.4e-26 122.1 77 77.9
QL12p001810 Quercus lobata HOM05D005844 ORTHO05D007203 2.9e-24 116.3 83 63.9
SEGI_32629 Sequoiadendron giganteum HOM05D005844 ORTHO05D007203 1.2e-22 110.9 87 63.2
AUR62043289 Chenopodium quinoa HOM05D005844 ORTHO05D007203 3.2e-18 96.3 76 61.8
CARHR261460 Cardamine hirsuta HOM05D005844 ORTHO05D007203 2.1e-14 83.6 56 67.9
SHI16462 Sapria himalayana HOM05D005844 ORTHO05D007203 4.1e-10 69.3 66 51.5


User provided reference genes

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