Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 3.8e-91 338.2 174 100.0
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 4.2e-34 148.7 140 53.6
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 2.3e-32 142.9 151 48.3
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 2.0e-31 139.8 151 47.0
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 8.3e-30 134.4 149 47.0
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.8e-29 133.3 150 48.7
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 7.0e-29 131.3 125 53.6
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 1.6e-28 130.2 150 45.3
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 2.3e-27 126.3 146 43.2
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 2.9e-27 125.9 145 47.6
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 3.8e-27 125.6 140 44.3
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 6.5e-27 124.8 140 46.4
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 6.5e-27 124.8 140 46.4
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 1.5e-26 123.6 150 45.3
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 4.2e-26 122.1 134 48.5
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 5.5e-26 121.7 149 41.6
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 1.6e-25 120.2 131 46.6
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 3.6e-25 119.0 134 47.8
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 1.0e-24 117.5 127 46.5
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 1.4e-24 117.1 141 43.3
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 3.0e-24 115.9 144 44.4
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 3.0e-24 115.9 144 44.4
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 6.8e-24 114.8 114 50.9
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 1.2e-23 114.0 116 47.4
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.5e-23 113.6 130 47.7
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 2.0e-23 113.2 144 45.8
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 5.7e-23 111.7 185 36.8
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.3e-22 110.5 151 41.7
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 4.9e-22 108.6 152 40.1
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 6.3e-22 108.2 110 47.3
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 1.4e-21 107.1 120 44.2
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 2.4e-21 106.3 158 39.9
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 4.1e-21 105.5 129 41.1
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 7.0e-21 104.8 134 40.3
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 9.2e-21 104.4 123 43.9
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 1.2e-20 104.0 123 43.1
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 3.5e-20 102.4 123 43.1
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 1.7e-19 100.1 155 38.1
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 1.7e-19 100.1 134 39.6
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 6.6e-19 98.2 116 43.1
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 8.6e-19 97.8 138 43.5
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.9e-18 96.7 117 42.7
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 4.3e-18 95.5 157 36.9
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.6e-17 93.6 144 37.5
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 2.1e-17 93.2 104 46.2
HPP92_003083 Vanilla planifolia HOM05D008092 ORTHO05D010277 2.8e-17 92.8 117 39.3
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 3.6e-17 92.4 138 41.3
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 4.0e-16 89.0 109 44.0
ECA232G1487 Erigeron canadensis HOM05D008092 ORTHO05D010277 5.2e-16 88.6 125 38.4
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 1.2e-15 87.4 125 41.6
CsaV3_3G042670 Cucumis sativus L. HOM05D008092 ORTHO05D010277 1.7e-14 83.6 125 35.2
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 3.7e-14 82.4 102 43.1
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 1.8e-13 80.1 69 49.3
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 4.1e-13 79.0 103 42.7
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 3.0e-11 72.8 73 45.2
Nitab4.5_0002306g0010 Nicotiana tabacum HOM05D008092 ORTHO05D010277 3.9e-11 72.4 93 40.9
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 3.9e-11 72.4 73 45.2
Oeu063467.1 Olea europaea HOM05D008092 ORTHO05D010277 2.3e-08 63.2 105 32.4
Mapoly0035s0098 Marchantia polymorpha HOM05D008092 ORTHO05D010277 8.9e-08 61.2 125 25.6
Haze_14716 Corylus avellana HOM05D008092 ORTHO05D010277 4.4e-07 58.9 79 43.0
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 4.9e-06 55.5 50 52.0
TPR.G15211 Trifolium pratense HOM05D008092 ORTHO05D010277 8.3e-06 54.7 75 45.3


User provided reference genes

Program Settings