Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021681 Daucus carota HOM05D006484 ORTHO05D008002 6.9e-190 667.2 339 100.0
HanXRQChr15g0474541 Helianthus annuus HOM05D006484 ORTHO05D008002 8.4e-103 377.9 338 60.4
Lsat_1_v5_gn_0_26201 Lactuca sativa HOM05D006484 ORTHO05D008002 3.2e-102 375.9 340 60.3
Dinv33496 Davidia involucrata HOM05D006484 ORTHO05D008002 1.1e-97 360.9 300 63.0
TAR629G1796 Trochodendron aralioides HOM05D006484 ORTHO05D008002 4.4e-96 355.5 342 56.7
ECA246G1918 Erigeron canadensis HOM05D006484 ORTHO05D008002 1.4e-94 350.5 272 65.8
CSS0043741 Camellia sinensis var. sinensis HOM05D006484 ORTHO05D008002 9.3e-94 347.8 305 60.7
Hma1.2p1_0802F.1_g220370 Hydrangea macrophylla HOM05D006484 ORTHO05D008002 2.1e-93 346.7 310 59.7
Migut.K01368 Erythranthe guttata HOM05D006484 ORTHO05D008002 4.6e-93 345.5 311 58.5
Rhsim08G0055200 Rhododendron simsii HOM05D006484 ORTHO05D008002 3.0e-92 342.8 346 57.5
PGR142G1659 Punica granatum HOM05D006484 ORTHO05D008002 8.7e-92 341.3 337 53.7
Manes.17G122200 Manihot esculenta HOM05D006484 ORTHO05D008002 9.6e-91 337.8 316 58.5
SalBow7G4444 Salvia bowleyana HOM05D006484 ORTHO05D008002 2.1e-90 336.7 323 57.3
Haze_14667 Corylus avellana HOM05D006484 ORTHO05D008002 3.6e-90 335.9 323 55.7
CiPaw.03G037700 Carya illinoinensis HOM05D006484 ORTHO05D008002 5.3e-89 332.0 325 54.8
Lj7A591T78 Lonicera japonica HOM05D006484 ORTHO05D008002 5.3e-89 332.0 280 62.5
MSTRG.15510 Avicennia marina HOM05D006484 ORTHO05D008002 1.2e-88 330.9 310 57.1
Cfa007430 Carpinus fangiana HOM05D006484 ORTHO05D008002 2.6e-88 329.7 305 57.4
QL02p076682 Quercus lobata HOM05D006484 ORTHO05D008002 5.8e-88 328.6 322 56.5
Thecc.04G008700 Theobroma cacao HOM05D006484 ORTHO05D008002 9.9e-88 327.8 306 56.9
Duzib147G0204 Durio zibethinus HOM05D006484 ORTHO05D008002 1.7e-87 327.0 303 57.1
Eucgr.I01814 Eucalyptus grandis HOM05D006484 ORTHO05D008002 1.7e-87 327.0 321 57.3
Nitab4.5_0003337g0080 Nicotiana tabacum HOM05D006484 ORTHO05D008002 1.7e-87 327.0 342 54.1
COL.COLO4_28946 Corchorus olitorius HOM05D006484 ORTHO05D008002 2.2e-87 326.6 320 54.1
CANSAT64G2071 Cannabis sativa HOM05D006484 ORTHO05D008002 4.9e-87 325.5 322 55.9
Nitab4.5_0005176g0030 Nicotiana tabacum HOM05D006484 ORTHO05D008002 4.9e-87 325.5 341 54.5
Cc07_g02300 Coffea canephora HOM05D006484 ORTHO05D008002 6.4e-87 325.1 264 64.0
TWI56G0797 Tripterygium wilfordii HOM05D006484 ORTHO05D008002 1.1e-86 324.3 337 54.0
unitig_88.g27777 Utricularia gibba HOM05D000190 ORTHO05D000113 1.4e-86 323.9 305 56.7
Ciclev10016148m.g Citrus clementina HOM05D006484 ORTHO05D008002 5.4e-86 322.0 307 56.7
Gohir.D11G071200 Gossypium hirsutum HOM05D006484 ORTHO05D008002 9.3e-86 321.2 311 56.3
Gorai.007G076500 Gossypium raimondii HOM05D006484 ORTHO05D008002 2.7e-85 319.7 343 53.1
Peaxi162Scf00129g00106 Petunia axillaris HOM05D006484 ORTHO05D008002 4.6e-85 318.9 309 55.0
Gohir.A11G067300 Gossypium hirsutum HOM05D006484 ORTHO05D008002 6.0e-85 318.5 311 55.9
GSVIVG01032484001 Vitis vinifera HOM05D006484 ORTHO05D008002 1.3e-84 317.4 265 61.9
Aqoxy3G01007 Aquilegia oxysepala HOM05D006484 ORTHO05D008002 3.9e-84 315.8 297 56.6
Prupe.3G283800 Prunus persica HOM05D006484 ORTHO05D008002 3.9e-84 315.8 327 51.7
Sopen02g031660 Solanum pennellii HOM05D006484 ORTHO05D008002 3.9e-84 315.8 323 54.8
ClCG10G014230 Citrullus lanatus HOM05D006484 ORTHO05D008002 5.1e-84 315.5 323 54.2
Solyc02g086890.3 Solanum lycopersicum HOM05D006484 ORTHO05D008002 1.5e-83 313.9 321 54.5
RcHm_v2.0_Chr2g0171411 Rosa chinensis HOM05D006484 ORTHO05D008002 4.3e-83 312.4 301 53.8
CsaV3_3G042410 Cucumis sativus L. HOM05D006484 ORTHO05D008002 5.6e-83 312.0 338 52.7
Potri.017G073000 Populus trichocarpa HOM05D006484 ORTHO05D008002 7.4e-83 311.6 301 55.5
SGA_v2.0_scaffold30G12470 Striga asiatica HOM05D006484 ORTHO05D008002 2.1e-82 310.1 314 53.8
MBI16_g26453_MAGBIO Magnolia biondii HOM05D006484 ORTHO05D008002 4.8e-82 308.9 341 51.9
EL10Ac6g14629 Beta vulgaris HOM05D006484 ORTHO05D008002 6.2e-82 308.5 317 53.6
FAN02G1518 Fragaria x ananassa HOM05D006484 ORTHO05D008002 6.2e-82 308.5 303 54.1
PSO832G1464 Papaver somniferum HOM05D006484 ORTHO05D008002 6.2e-82 308.5 315 54.6
MELO3C009955.2 Cucumis melo HOM05D006484 ORTHO05D008002 1.4e-81 307.4 337 52.2
PSO063G6163 Papaver somniferum HOM05D006484 ORTHO05D008002 1.4e-81 307.4 346 52.3
Sabra16G0230700 Salix brachista HOM05D006484 ORTHO05D008002 2.4e-81 306.6 302 55.6
arahy.Tifrunner.gnm1.ann1.ND36BV Arachis hypogaea HOM05D006484 ORTHO05D008002 4.0e-81 305.8 318 53.5
FvH4_6g50620 Fragaria vesca HOM05D006484 ORTHO05D008002 4.0e-81 305.8 341 50.4
FAN14G3872 Fragaria x ananassa HOM05D006484 ORTHO05D008002 4.0e-81 305.8 341 50.1
arahy.Tifrunner.gnm1.ann1.J6NIZK Arachis hypogaea HOM05D006484 ORTHO05D008002 5.3e-81 305.4 318 53.5
Hund05806 Selenicereus undatus HOM05D006484 ORTHO05D008002 5.3e-81 305.4 317 54.6
MD17G1035000 Malus domestica HOM05D006484 ORTHO05D008002 6.9e-81 305.1 344 49.7
FAN09G0334 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.5e-80 303.9 341 50.1
Lalb_Chr21g0319431 Lupinus albus HOM05D006484 ORTHO05D008002 2.2e-79 300.1 271 55.0
PGSC0003DMG401000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 2.9e-79 299.7 262 59.5
PGSC0003DMG402000526 Solanum tuberosum HOM05D006484 ORTHO05D008002 2.9e-79 299.7 262 59.5
VMungo0464G2075 Vigna mungo HOM05D006484 ORTHO05D008002 4.9e-79 298.9 307 54.1
Sed0007993 Sechium edule HOM05D006484 ORTHO05D008002 2.5e-78 296.6 328 50.0
Glyma.19G009200 Glycine max HOM05D006484 ORTHO05D008002 7.1e-78 295.0 270 56.7
FAN05G1767 Fragaria x ananassa HOM05D006484 ORTHO05D008002 1.6e-77 293.9 337 49.0
Glyma.13G169000 Glycine max HOM05D006484 ORTHO05D008002 2.7e-77 293.1 318 50.3
TPR.G2295 Trifolium pratense HOM05D006484 ORTHO05D008002 3.5e-77 292.7 339 47.5
Phvul.004G016700 Phaseolus vulgaris HOM05D006484 ORTHO05D008002 1.0e-76 291.2 270 56.7
Ah.02g127510 Amaranthus hybridus HOM05D006484 ORTHO05D008002 3.0e-76 289.7 258 58.1
Ca_04198_v3 Cicer arietinum L. HOM05D006484 ORTHO05D008002 1.5e-75 287.3 286 54.9
CDE05G1394 Ceratophyllum demersum HOM05D001719 ORTHO05D008883 9.6e-75 284.6 264 55.3
Psat1g058640 Pisum sativum HOM05D006484 ORTHO05D008002 9.6e-75 284.6 263 55.5
C08p30440 Brassica napus HOM05D006484 ORTHO05D008002 1.6e-74 283.9 302 50.7
THA.LOC104805398 Tarenaya hassleriana HOM05D006484 ORTHO05D008002 1.6e-74 283.9 300 51.7
BraA09t40274Z Brassica rapa HOM05D006484 ORTHO05D008002 2.8e-74 283.1 303 50.8
BcaC07g39842 Brassica carinata HOM05D006484 ORTHO05D008002 3.7e-74 282.7 302 50.7
BolC8t50667H Brassica oleracea HOM05D006484 ORTHO05D008002 3.7e-74 282.7 302 50.3
Os05g0526200 Oryza sativa ssp. japonica HOM05D006484 ORTHO05D008002 8.2e-74 281.6 266 57.1
A09p48180 Brassica napus HOM05D006484 ORTHO05D008002 1.4e-73 280.8 303 50.2
BcaB02g08436 Brassica carinata HOM05D006484 ORTHO05D008002 2.4e-73 280.0 269 54.6
BcaC02g09737 Brassica carinata HOM05D006484 ORTHO05D008002 3.1e-73 279.6 298 51.0
C04p37040 Brassica napus HOM05D006484 ORTHO05D008002 3.1e-73 279.6 298 51.0
BolC4t25282H Brassica oleracea HOM05D006484 ORTHO05D008002 3.1e-73 279.6 298 51.0
Sc10g0003790 Simmondsia chinensis HOM05D006484 ORTHO05D008002 4.0e-73 279.3 332 48.5
Aa31LG10G9850 Aethionema arabicum HOM05D006484 ORTHO05D008002 5.3e-73 278.9 297 50.8
A04p04700 Brassica napus HOM05D006484 ORTHO05D008002 5.3e-73 278.9 300 51.7
BraA04t16182Z Brassica rapa HOM05D006484 ORTHO05D008002 5.3e-73 278.9 300 51.7
Lj2g0018435 Lotus japonicus HOM05D006484 ORTHO05D008002 1.2e-72 277.7 323 48.0
AL5G36370 Arabidopsis lyrata HOM05D006484 ORTHO05D008002 2.0e-72 276.9 299 51.2
Sp5g07210 Schrenkiella parvula HOM05D006484 ORTHO05D008002 3.4e-72 276.2 303 50.2
Medtr6g007180 Medicago truncatula HOM05D006484 ORTHO05D008002 5.8e-72 275.4 316 48.4
AT3G55250 Arabidopsis thaliana HOM05D006484 ORTHO05D008002 7.6e-72 275.0 297 50.8
ATR0730G086 Amborella trichopoda HOM05D006484 ORTHO05D008002 1.0e-71 274.6 264 56.4
CARHR165250 Cardamine hirsuta HOM05D006484 ORTHO05D008002 1.7e-71 273.9 299 51.5
Carub.0005s2191 Capsella rubella HOM05D006484 ORTHO05D008002 1.1e-70 271.2 300 50.0
Thhalv10010599m.g Eutrema salsugineum HOM05D006484 ORTHO05D008002 3.5e-69 266.2 269 52.8
Nn4g22800 Nelumbo nucifera HOM05D006484 ORTHO05D008002 2.3e-68 263.5 352 48.0
HPP92_024318 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.7e-63 247.3 258 50.0
BcaB01g00117 Brassica carinata HOM05D006484 ORTHO05D008002 3.9e-60 236.1 318 44.7
Actinidia35740 Actinidia chinensis HOM05D006484 ORTHO05D008002 4.8e-58 229.2 221 53.8
vmacro18241 Vaccinium macrocarpon HOM05D006484 ORTHO05D008002 1.4e-57 227.6 320 43.4
Cpa.g.sc39.92 Carica papaya HOM05D006484 ORTHO05D008002 1.8e-52 210.7 163 64.4
AUR62007841 Chenopodium quinoa HOM05D006484 ORTHO05D008002 7.7e-48 195.3 330 39.7
Zm00001eb215070 Zea mays HOM05D006484 ORTHO05D008002 1.7e-42 177.6 160 56.9
BolC3t16636H Brassica oleracea HOM05D006484 ORTHO05D008002 4.8e-42 176.0 163 53.4
BolC7t43763H Brassica oleracea HOM05D006484 ORTHO05D008002 7.7e-40 168.7 183 47.5
AagrBONN_evm.TU.Sc2ySwM_344.2636 Anthoceros agrestis HOM05D006484 ORTHO05D008002 3.8e-39 166.4 216 45.4
Mapoly0095s0016 Marchantia polymorpha HOM05D006484 ORTHO05D008002 8.5e-39 165.2 230 41.3
Pp3c21_1380 Physcomitrium patens HOM05D006484 ORTHO05D008002 9.4e-38 161.8 236 40.3
AUR62003035 Chenopodium quinoa HOM05D006484 ORTHO05D008002 8.8e-36 155.2 238 41.6
SMO165G0092 Selaginella moellendorffii HOM05D006484 ORTHO05D008002 1.2e-32 144.8 228 39.0
HPP92_024280 Vanilla planifolia HOM05D006484 ORTHO05D008002 1.2e-32 144.8 168 47.6
CBR_g163 Chara braunii HOM05D006484 ORTHO05D008002 2.7e-32 143.7 246 37.0
Atru.chr6.2293 Acer truncatum HOM05D006484 ORTHO05D008002 1.3e-31 141.4 88 72.7
CAN.G473.120 Capsicum annuum HOM05D006484 ORTHO05D008002 1.7e-26 124.4 165 45.5
Atru.chr6.2294 Acer truncatum HOM05D006484 ORTHO05D008002 4.2e-22 109.8 87 64.4
CAN.G685.18 Capsicum annuum HOM05D006484 ORTHO05D008002 1.0e-20 105.1 126 48.4
BcaC06g34142 Brassica carinata HOM05D006484 ORTHO05D008002 2.7e-16 90.5 129 39.5
arahy.Tifrunner.gnm1.ann1.QWBN9A Arachis hypogaea HOM05D006484 ORTHO05D008002 2.9e-15 87.0 51 76.5
TPR.G33278 Trifolium pratense HOM05D006484 ORTHO05D008002 1.6e-13 81.3 51 72.5
MD09G1034600 Malus domestica HOM05D006484 ORTHO05D000001 9.8e-11 72.0 59 55.9
Cre03.g183400 Chlamydomonas reinhardtii HOM05D006484 ORTHO05D008002 1.2e-08 65.1 144 29.9
arahy.Tifrunner.gnm1.ann1.5V94PQ Arachis hypogaea HOM05D005791 ORTHO05D008002 1.7e-07 61.2 102 44.1
MD09G1034700 Malus domestica HOM05D006484 ORTHO05D008002 5.0e-07 59.7 111 35.1


User provided reference genes

Program Settings