Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021637 Daucus carota HOM05D007269 ORTHO05D008531 6.3e-126 454.1 234 100.0
DCAR_021638 Daucus carota HOM05D007269 ORTHO05D008531 1.7e-70 270.0 238 64.7
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 2.0e-23 113.6 231 35.9
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 1.9e-21 107.1 228 35.1
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 4.2e-21 105.9 247 35.6
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.7e-20 103.2 240 36.2
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 5.2e-19 99.0 246 29.7
CAN.G732.21 Capsicum annuum HOM05D007269 ORTHO05D008531 1.2e-18 97.8 216 31.9
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 3.4e-18 96.3 222 32.9
Sopen03g028190 Solanum pennellii HOM05D007269 ORTHO05D008531 7.5e-18 95.1 231 33.3
PGSC0003DMG400026484 Solanum tuberosum HOM05D007269 ORTHO05D008531 1.3e-17 94.4 242 32.6
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.8e-17 92.4 227 31.7
Solyc03g097430.1 Solanum lycopersicum HOM05D007269 ORTHO05D008531 1.1e-16 91.3 234 31.6
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.4e-16 90.9 229 34.9
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 3.1e-16 89.7 225 29.8
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 3.1e-16 89.7 229 33.2
MD06G1137900 Malus domestica HOM05D007269 ORTHO05D008531 2.7e-15 86.7 231 30.7
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 4.5e-15 85.9 222 30.6
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 4.5e-15 85.9 226 31.4
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 7.7e-15 85.1 232 31.5
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.3e-14 84.3 218 33.0
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.3e-14 84.3 225 31.1
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 1.7e-14 84.0 239 28.5
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.7e-14 84.0 236 29.7
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.3e-14 83.6 90 48.9
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 2.9e-14 83.2 220 30.9
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 3.8e-14 82.8 226 30.1
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 3.8e-14 82.8 225 30.7
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 6.5e-14 82.0 237 30.4
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 8.6e-14 81.6 234 29.5
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.1e-13 81.3 225 32.0
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 2.5e-13 80.1 232 30.2
Prupe.5G148200 Prunus persica HOM05D007269 ORTHO05D008531 3.2e-13 79.7 216 32.4
ECA232G3539 Erigeron canadensis HOM05D007269 ORTHO05D008531 4.2e-13 79.3 82 48.8
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 5.5e-13 79.0 84 47.6
Phvul.002G285300 Phaseolus vulgaris HOM05D007269 ORTHO05D008531 7.2e-13 78.6 235 30.6
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 9.5e-13 78.2 225 27.1
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 9.5e-13 78.2 230 29.6
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 1.2e-12 77.8 243 27.2
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.1e-12 77.0 228 29.8
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 2.8e-12 76.6 77 45.5
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 2.8e-12 76.6 233 30.0
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 3.6e-12 76.3 229 29.7
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 4.7e-12 75.9 248 29.0
RcHm_v2.0_Chr7g0189701 Rosa chinensis HOM05D007269 ORTHO05D008531 8.0e-12 75.1 231 31.6
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 1.8e-11 73.9 247 27.5
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 3.0e-11 73.2 237 28.7
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 6.8e-11 72.0 238 29.8
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 8.8e-11 71.6 241 29.9
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.2e-10 71.2 232 34.1
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 2.6e-10 70.1 243 30.0
FAN13G1779 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.6e-10 70.1 231 34.2
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.6e-10 70.1 243 30.0
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 3.4e-10 69.7 230 27.8
MD14G1153300 Malus domestica HOM05D007269 ORTHO05D008531 3.4e-10 69.7 93 45.2
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 7.5e-10 68.6 232 24.6
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.3e-09 67.8 231 27.7
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 1.7e-09 67.4 230 28.7
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 2.2e-09 67.0 228 28.1
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 2.2e-09 67.0 236 26.7
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 2.8e-09 66.6 243 29.2
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 3.7e-09 66.2 270 28.5
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 3.7e-09 66.2 144 37.5
Lalb_Chr13g0297191 Lupinus albus HOM05D007269 ORTHO05D008531 1.1e-08 64.7 233 28.3
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.8e-08 63.9 240 29.2
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.8e-08 63.9 86 41.9
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.4e-08 63.5 127 36.2
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 5.4e-08 62.4 226 28.3
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 5.4e-08 62.4 236 28.0
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 9.2e-08 61.6 231 26.4
Rhsim12G0177300 Rhododendron simsii HOM05D007269 ORTHO05D008531 9.2e-08 61.6 236 27.1
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 3.5e-07 59.7 237 27.0
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 7.8e-07 58.5 195 30.3
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 2.9e-06 56.6 188 27.7


User provided reference genes

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