Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021623 Daucus carota HOM05D005391 ORTHO05D006694 9.3e-81 303.5 158 100.0
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 1.4e-31 140.2 190 50.0
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 2.2e-29 132.9 174 46.6
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 2.0e-27 126.3 176 45.5
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 2.5e-25 119.4 173 42.2
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 3.3e-25 119.0 155 45.8
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 3.3e-25 119.0 161 43.5
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 9.5e-25 117.5 170 42.9
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 1.6e-24 116.7 160 42.5
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 1.4e-23 113.6 164 40.9
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 1.8e-23 113.2 183 41.0
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 1.8e-23 113.2 169 43.8
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 2.3e-23 112.8 161 41.6
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.1e-23 112.5 176 41.5
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 3.1e-23 112.5 176 41.5
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 6.8e-23 111.3 160 43.8
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 6.8e-23 111.3 162 41.4
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 1.2e-22 110.5 162 40.7
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 1.2e-22 110.5 184 39.7
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 2.0e-22 109.8 186 41.9
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 2.6e-22 109.4 185 38.9
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 2.6e-22 109.4 179 41.9
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 3.4e-22 109.0 172 40.1
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 7.5e-22 107.8 184 41.8
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.3e-21 107.1 183 42.6
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 1.3e-21 107.1 183 42.6
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 1.3e-21 107.1 183 42.6
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 2.9e-21 105.9 167 43.1
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 2.9e-21 105.9 170 41.2
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 6.4e-21 104.8 171 41.5
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.9e-20 103.2 170 40.6
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 3.2e-20 102.4 198 35.4
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 3.2e-20 102.4 196 37.8
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 4.1e-20 102.1 190 40.5
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 4.1e-20 102.1 187 37.4
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 5.4e-20 101.7 155 42.6
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 5.4e-20 101.7 169 40.2
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 9.2e-20 100.9 186 38.2
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 9.2e-20 100.9 175 40.6
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 1.2e-19 100.5 176 37.5
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 1.6e-19 100.1 180 38.9
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 2.0e-19 99.8 174 37.9
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 2.0e-19 99.8 191 38.7
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 2.0e-19 99.8 191 39.3
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 2.7e-19 99.4 184 37.5
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 3.5e-19 99.0 180 38.3
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 3.5e-19 99.0 180 38.3
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 3.5e-19 99.0 178 37.1
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 3.5e-19 99.0 165 38.2
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 4.6e-19 98.6 177 37.9
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 4.6e-19 98.6 153 39.9
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 4.6e-19 98.6 166 38.0
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 6.0e-19 98.2 176 37.5
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 6.0e-19 98.2 178 38.8
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 7.8e-19 97.8 166 36.1
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 1.0e-18 97.4 168 38.7
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 1.3e-18 97.1 164 39.6
Haze_07152 Corylus avellana HOM05D005391 ORTHO05D006694 1.7e-18 96.7 182 35.2
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 2.3e-18 96.3 166 36.7
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 3.0e-18 95.9 166 38.6
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 3.9e-18 95.5 170 38.2
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 3.9e-18 95.5 184 38.6
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 5.0e-18 95.1 193 34.2
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 6.6e-18 94.7 172 36.6
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 6.6e-18 94.7 189 37.0
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 8.6e-18 94.4 177 37.9
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 1.1e-17 94.0 168 36.9
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 1.5e-17 93.6 182 34.6
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 4.3e-17 92.0 184 35.3
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 4.3e-17 92.0 183 36.6
MSTRG.25825 Avicennia marina HOM05D005391 ORTHO05D006694 5.6e-17 91.7 201 34.3
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 7.3e-17 91.3 194 34.5
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 7.3e-17 91.3 187 34.8
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 7.3e-17 91.3 167 34.7
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 9.5e-17 90.9 155 38.7
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 9.5e-17 90.9 187 34.8
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 9.5e-17 90.9 199 32.2
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 9.5e-17 90.9 188 34.0
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 1.2e-16 90.5 205 34.6
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 2.1e-16 89.7 189 35.4
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 2.8e-16 89.4 163 38.0
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 2.8e-16 89.4 177 35.0
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 2.8e-16 89.4 193 35.2
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 6.2e-16 88.2 171 34.5
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 6.2e-16 88.2 171 34.5
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 6.2e-16 88.2 189 34.9
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 6.2e-16 88.2 202 35.1
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 8.1e-16 87.8 169 34.9
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 1.4e-15 87.0 177 33.9
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 2.3e-15 86.3 192 33.9
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 3.1e-15 85.9 179 34.1
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 3.1e-15 85.9 172 34.3
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 4.0e-15 85.5 171 31.6
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 4.0e-15 85.5 171 31.6
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 5.2e-15 85.1 166 35.5
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 8.9e-15 84.3 159 35.2
SalBow8G3527 Salvia bowleyana HOM05D005391 ORTHO05D006694 8.9e-15 84.3 192 33.9
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 1.5e-14 83.6 183 35.5
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 1.5e-14 83.6 170 32.4
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 1.5e-14 83.6 161 33.5
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 1.5e-14 83.6 161 33.5
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 2.0e-14 83.2 166 34.3
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 3.4e-14 82.4 177 32.8
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 4.4e-14 82.0 172 32.0
HanXRQChr09g0273301 Helianthus annuus HOM05D005391 ORTHO05D006694 7.5e-14 81.3 133 42.9
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 9.8e-14 80.9 148 39.9
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 9.8e-14 80.9 165 33.3
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 9.8e-14 80.9 160 35.0
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 1.3e-13 80.5 173 32.4
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 3.7e-13 79.0 181 32.6
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 3.7e-13 79.0 172 30.8
Ca_01190_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 7.1e-12 74.7 77 49.4
CSS0049043 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.6e-11 73.6 65 56.9
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 2.1e-11 73.2 230 29.6
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 2.1e-11 73.2 226 29.6
ClCG06G017970 Citrullus lanatus HOM05D005391 ORTHO05D006694 3.3e-09 65.9 234 25.6
SMO364G0653 Selaginella moellendorffii HOM05D005391 ORTHO05D006694 5.6e-09 65.1 138 30.4
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 9.5e-09 64.3 152 30.3
Oeu040668.1 Olea europaea HOM05D005391 ORTHO05D006694 9.5e-09 64.3 129 35.7
Pp3c7_3280 Physcomitrium patens HOM05D005391 ORTHO05D006694 3.6e-08 62.4 174 28.2
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 8.1e-08 61.2 173 29.5
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 1.4e-07 60.5 123 37.4
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 3.1e-07 59.3 142 33.1


User provided reference genes

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