Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 1.6e-126 456.1 222 100.0
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 7.7e-57 224.6 180 63.9
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 1.7e-51 206.8 207 50.2
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 4.9e-51 205.3 215 47.0
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 1.4e-50 203.8 217 48.4
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 4.1e-50 202.2 215 49.3
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 5.4e-50 201.8 227 49.3
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 5.4e-50 201.8 221 48.0
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 2.0e-49 199.9 212 48.1
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 5.9e-49 198.4 213 51.2
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 7.8e-49 198.0 210 47.1
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.0e-48 197.6 215 47.4
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 1.0e-48 197.6 204 48.5
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.0e-48 197.6 215 49.3
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 3.0e-48 196.1 215 47.0
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 3.0e-48 196.1 215 47.0
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 8.6e-48 194.5 223 48.0
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 1.1e-47 194.1 222 47.7
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 1.5e-47 193.7 208 47.6
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 1.9e-47 193.4 215 45.6
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 1.9e-47 193.4 215 48.4
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 1.9e-47 193.4 212 48.6
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 3.3e-47 192.6 209 47.4
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 4.3e-47 192.2 212 46.2
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 7.3e-47 191.4 218 47.7
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 9.5e-47 191.0 208 46.2
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 9.5e-47 191.0 212 48.1
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 2.1e-46 189.9 226 46.5
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 2.1e-46 189.9 228 46.1
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 2.8e-46 189.5 206 48.1
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 3.6e-46 189.1 225 46.2
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 4.7e-46 188.7 211 47.9
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 6.2e-46 188.3 209 45.9
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 6.2e-46 188.3 219 46.1
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 6.2e-46 188.3 208 48.1
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 1.0e-45 187.6 219 47.9
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 1.0e-45 187.6 220 45.9
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.0e-45 187.6 209 49.3
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 2.3e-45 186.4 211 44.1
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 8.9e-45 184.5 223 44.4
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 8.9e-45 184.5 223 43.9
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 8.9e-45 184.5 218 46.8
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 1.2e-44 184.1 206 46.1
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 1.2e-44 184.1 220 45.5
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.3e-43 180.6 230 44.8
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 6.4e-43 178.3 232 45.3
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 8.3e-43 177.9 220 42.7
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.1e-42 177.6 245 41.2
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.4e-42 177.2 228 40.8
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 2.4e-42 176.4 158 58.9
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 5.4e-42 175.3 227 44.5
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 2.7e-41 172.9 171 53.2
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 4.6e-41 172.2 215 44.7
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 1.3e-40 170.6 228 44.7
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 3.9e-40 169.1 261 39.1
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 5.0e-40 168.7 210 44.3
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 6.6e-40 168.3 183 46.4
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 6.6e-40 168.3 175 50.3
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 8.6e-40 167.9 211 43.6
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 8.6e-40 167.9 261 37.5
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.5e-39 167.2 230 44.3
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 1.9e-39 166.8 140 57.9
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 2.5e-39 166.4 221 42.5
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 4.3e-39 165.6 212 43.4
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 5.6e-39 165.2 154 53.2
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 5.6e-39 165.2 216 43.1
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 1.6e-38 163.7 181 47.5
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 2.1e-38 163.3 217 43.3
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 2.8e-38 162.9 210 42.9
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 2.8e-38 162.9 178 47.8
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 3.6e-38 162.5 154 52.6
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 2.3e-37 159.8 322 31.1
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 3.1e-37 159.5 129 60.5
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.1e-37 159.5 212 43.4
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.1e-37 159.5 212 43.4
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 3.1e-37 159.5 212 43.4
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 4.0e-37 159.1 209 42.6
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 4.0e-37 159.1 205 42.9
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 5.2e-37 158.7 209 40.7
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 5.2e-37 158.7 209 43.1
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 5.2e-37 158.7 150 52.0
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.2e-37 158.7 205 42.4
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.5e-36 157.1 151 50.3
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 3.4e-36 156.0 209 41.6
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 3.4e-36 156.0 209 41.6
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 3.7e-35 152.5 138 53.6
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.4e-34 150.6 138 52.9
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 2.4e-34 149.8 153 45.8
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 7.1e-34 148.3 222 38.7
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 7.1e-34 148.3 134 56.7
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 1.2e-33 147.5 139 51.8
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 2.7e-33 146.4 132 54.5
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 3.5e-33 146.0 132 54.5
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 4.6e-33 145.6 147 44.9
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 4.6e-33 145.6 136 53.7
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 3.0e-32 142.9 198 39.9
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 5.1e-32 142.1 136 52.9
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 5.1e-32 142.1 136 52.2
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 8.6e-32 141.4 147 42.9
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 1.5e-31 140.6 135 51.9
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 1.9e-31 140.2 135 54.8
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 1.2e-30 137.5 136 51.5
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 4.7e-30 135.6 150 50.7
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 6.2e-30 135.2 142 45.1
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 6.8e-29 131.7 140 49.3
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 6.8e-29 131.7 138 49.3
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 5.4e-26 122.1 128 50.0
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 2.1e-25 120.2 215 32.6
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 7.8e-25 118.2 128 46.1
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 3.9e-24 115.9 211 36.5
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 1.5e-23 114.0 208 34.6
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 2.5e-23 113.2 144 38.2
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 1.2e-22 110.9 141 44.0
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 1.6e-22 110.5 105 53.3
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 3.2e-18 96.3 69 56.5
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 1.7e-11 73.9 73 46.6
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 1.4e-10 70.9 55 56.4
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 7.1e-10 68.6 57 56.1
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 3.9e-08 62.8 72 38.9
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 4.8e-06 55.8 61 37.7


User provided reference genes

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