Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 7.6e-258 893.3 433 100.0
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 3.0e-182 642.1 434 73.7
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 1.5e-181 639.8 433 72.3
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 9.8e-181 637.1 434 72.1
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 1.8e-179 632.9 433 70.7
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 2.5e-176 622.5 438 69.9
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 5.5e-176 621.3 438 70.5
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 9.5e-176 620.5 438 70.3
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 6.1e-175 617.8 435 69.7
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 1.0e-174 617.1 435 69.0
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 1.5e-173 613.2 432 69.2
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 2.6e-173 612.5 432 66.9
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 2.6e-173 612.5 434 68.9
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 3.4e-173 612.1 425 70.1
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 1.7e-172 609.8 434 69.1
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 2.8e-172 609.0 433 68.6
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 3.7e-172 608.6 434 67.5
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 1.8e-171 606.3 434 69.1
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 4.1e-171 605.1 434 69.6
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 5.4e-171 604.7 458 67.9
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 5.4e-171 604.7 432 69.0
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 9.2e-171 604.0 434 68.2
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 1.2e-170 603.6 439 67.7
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.2e-170 603.6 434 69.4
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 2.0e-170 602.8 434 68.7
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 4.5e-170 601.7 425 68.5
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 1.7e-169 599.7 436 67.0
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 1.7e-169 599.7 432 68.3
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 3.9e-169 598.6 434 68.2
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 3.9e-169 598.6 437 67.5
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 5.0e-169 598.2 433 68.6
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 1.9e-168 596.3 420 69.0
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 2.5e-168 595.9 420 69.0
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 4.3e-168 595.1 433 65.8
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 4.3e-168 595.1 432 68.1
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 1.2e-167 593.6 432 66.4
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 1.6e-167 593.2 433 68.1
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 6.1e-167 591.3 432 66.4
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 8.0e-167 590.9 432 65.7
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 8.0e-167 590.9 432 66.2
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 8.0e-167 590.9 434 67.3
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 1.4e-166 590.1 433 67.0
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 3.1e-166 589.0 433 65.8
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 4.0e-166 588.6 436 65.6
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 6.8e-166 587.8 432 65.5
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 8.9e-166 587.4 436 66.1
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 1.3e-164 583.6 399 70.2
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 1.7e-164 583.2 433 66.1
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 2.2e-164 582.8 432 64.6
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 2.2e-164 582.8 436 66.3
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 8.3e-164 580.9 432 66.9
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 1.9e-163 579.7 432 64.6
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 1.6e-162 576.6 419 65.4
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 2.0e-162 576.2 433 64.4
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 2.7e-162 575.9 397 70.8
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 4.6e-162 575.1 434 64.1
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 3.9e-161 572.0 433 64.9
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 5.0e-161 571.6 435 67.1
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 1.9e-160 569.7 408 70.6
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 2.5e-160 569.3 434 65.0
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 4.3e-160 568.5 428 64.0
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 1.6e-159 566.6 434 64.7
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 3.6e-159 565.5 435 65.1
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 1.4e-158 563.5 434 64.3
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 1.4e-158 563.5 444 63.3
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 3.1e-158 562.4 490 60.6
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 4.0e-158 562.0 431 65.4
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 6.8e-158 561.2 432 64.6
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 8.9e-158 560.8 435 63.4
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 4.4e-157 558.5 428 62.6
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 1.3e-156 557.0 434 63.8
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 2.2e-156 556.2 339 77.0
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.2e-156 556.2 434 64.5
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 6.4e-156 554.7 443 62.3
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 1.4e-155 553.5 435 64.1
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 2.4e-155 552.7 434 64.5
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 2.4e-155 552.7 428 62.1
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 3.2e-155 552.4 499 58.3
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 5.4e-155 551.6 460 61.3
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 9.2e-155 550.8 449 63.5
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 6.0e-154 548.1 434 64.1
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 1.3e-153 547.0 474 60.1
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 3.0e-153 545.8 435 63.4
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 1.9e-152 543.1 433 63.5
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 2.1e-151 539.7 433 60.5
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 1.1e-150 537.3 434 61.8
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 2.3e-150 536.2 397 66.0
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 3.1e-150 535.8 397 66.5
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 3.5e-146 522.3 432 61.8
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 2.3e-145 519.6 427 60.0
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 1.6e-143 513.5 431 58.9
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 3.8e-140 502.3 344 70.6
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 3.3e-136 489.2 427 58.1
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 7.6e-133 478.0 349 65.3
Glyma.04G195500 Glycine max HOM05D005744 ORTHO05D007503 9.3e-131 471.1 314 70.4
Sc04g0000680 Simmondsia chinensis HOM05D005744 ORTHO05D007503 2.7e-130 469.5 302 72.8
Aa31LG7G10960 Aethionema arabicum HOM05D005744 ORTHO05D007503 2.5e-128 463.0 305 68.5
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 4.3e-128 462.2 302 69.9
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 1.4e-126 457.2 433 55.0
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 1.8e-126 456.8 321 70.4
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 1.2e-125 454.1 432 53.7
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 3.8e-124 449.1 343 63.3
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 1.1e-123 447.6 442 53.6
FAN07G2643 Fragaria x ananassa HOM05D005744 ORTHO05D007503 6.7e-121 438.3 325 64.9
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 2.1e-119 433.3 427 54.6
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 2.5e-115 419.9 429 49.2
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 1.2e-109 401.0 429 46.2
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 1.0e-108 397.9 431 46.4
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 5.1e-105 385.6 283 70.0
FAN12G3536 Fragaria x ananassa HOM05D005744 ORTHO05D007503 7.7e-101 371.7 325 58.5
FAN12G3591 Fragaria x ananassa HOM05D005744 ORTHO05D007503 8.5e-92 341.7 307 57.0
SEGI_05259 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 9.4e-91 338.2 316 52.8
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 1.7e-79 300.8 282 57.1
MCO07G390 Micromonas commoda HOM05D005744 ORTHO05D007503 1.6e-69 267.7 460 37.4
SEGI_21905 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 1.0e-68 265.0 186 63.4
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis HOM05D005744 ORTHO05D007503 1.1e-62 245.0 228 48.7
SHI06365 Sapria himalayana HOM05D005744 ORTHO05D007503 3.5e-61 240.0 384 38.8
PRCOL_00001155 Prasinoderma coloniale HOM05D005744 ORTHO05D007503 9.8e-56 221.9 419 36.0
Cre16.g666000 Chlamydomonas reinhardtii HOM05D005744 ORTHO05D007503 1.7e-52 211.1 589 28.5
HanXRQChr10g0289761 Helianthus annuus HOM05D005744 ORTHO05D007503 6.8e-49 199.1 210 51.4
RcHm_v2.0_Chr4g0407951 Rosa chinensis HOM05D005744 ORTHO05D007503 4.9e-47 193.0 260 43.5
Lsat_1_v5_gn_8_77640 Lactuca sativa HOM05D005744 ORTHO05D007503 2.1e-42 177.6 166 59.0
GSVIVG01008540001 Vitis vinifera HOM05D005744 ORTHO05D007503 5.8e-40 169.5 116 72.4
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 3.7e-39 166.8 116 69.8
QL10p003231 Quercus lobata HOM05D005744 ORTHO05D007503 8.6e-36 155.6 116 64.7
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 1.4e-30 138.3 134 59.0
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 5.2e-25 119.8 156 45.5
Lsat_1_v5_gn_8_150141 Lactuca sativa HOM05D005744 ORTHO05D048266 3.8e-23 113.6 116 50.9
RcHm_v2.0_Chr4g0407901 Rosa chinensis HOM05D005744 ORTHO05D007503 2.4e-22 110.9 254 33.9
TAR629G1577 Trochodendron aralioides HOM05D005744 ORTHO05D007503 5.4e-14 83.2 58 72.4
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 3.1e-09 67.4 120 38.3
SEGI_17145 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 5.3e-09 66.6 66 54.5
HanXRQChr10g0289791 Helianthus annuus HOM05D005744 ORTHO05D048266 5.8e-08 63.2 64 46.9


User provided reference genes

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