Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021566 Daucus carota HOM05D000086 ORTHO05D001065 8.0e-55 216.9 110 100.0
Nitab4.5_0000852g0120 Nicotiana tabacum HOM05D000086 ORTHO05D001065 1.2e-13 80.1 121 43.0
Solyc03g114190.1 Solanum lycopersicum HOM05D000086 ORTHO05D001065 1.2e-13 80.1 126 43.7
Sopen03g033270 Solanum pennellii HOM05D000086 ORTHO05D001065 1.2e-13 80.1 126 43.7
Peaxi162Scf00017g00282 Petunia axillaris HOM05D000086 ORTHO05D001065 5.8e-13 77.8 127 39.4
PGSC0003DMG400024595 Solanum tuberosum HOM05D000086 ORTHO05D001065 5.8e-13 77.8 123 43.9
Eucgr.K02856 Eucalyptus grandis HOM05D000086 ORTHO05D001065 3.8e-12 75.1 125 41.6
MBI14_g46933_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D001065 1.9e-11 72.8 124 40.3
CSS0041492 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D001065 2.7e-10 68.9 91 48.4
Cc04_g12920 Coffea canephora HOM05D000157 ORTHO05D001065 2.7e-10 68.9 138 38.4
Hma1.2p1_0176F.1_g077650 Hydrangea macrophylla HOM05D000086 ORTHO05D001065 2.7e-10 68.9 123 43.1
Thecc.03G009900 Theobroma cacao HOM05D000086 ORTHO05D001065 2.7e-10 68.9 124 37.9
Atru.chr9.2447 Acer truncatum HOM05D000086 ORTHO05D001065 3.5e-10 68.6 125 40.0
Sed0002756 Sechium edule HOM05D000086 ORTHO05D001065 3.5e-10 68.6 102 44.1
Aqoxy3G00986 Aquilegia oxysepala HOM05D000086 ORTHO05D001065 4.6e-10 68.2 124 37.1
Oeu022166.1 Olea europaea HOM05D000086 ORTHO05D001065 4.6e-10 68.2 122 40.2
Eucgr.B00359 Eucalyptus grandis HOM05D000086 ORTHO05D001065 7.8e-10 67.4 123 39.8
RcHm_v2.0_Chr7g0193811 Rosa chinensis HOM05D000086 ORTHO05D001065 7.8e-10 67.4 124 37.9
SalBow1G1023 Salvia bowleyana HOM05D000086 ORTHO05D001065 7.8e-10 67.4 106 44.3
vmacro16600 Vaccinium macrocarpon HOM05D000086 ORTHO05D001065 7.8e-10 67.4 129 34.9
Rhsim12G0163500 Rhododendron simsii HOM05D000086 ORTHO05D001065 1.7e-09 66.2 125 34.4
FAN04G2400 Fragaria x ananassa HOM05D000086 ORTHO05D001065 2.3e-09 65.9 122 41.0
MD06G1176900 Malus domestica HOM05D000086 ORTHO05D001065 2.3e-09 65.9 126 37.3
Ciclev10022743m.g Citrus clementina HOM05D000086 ORTHO05D001065 5.1e-09 64.7 119 38.7
COL.COLO4_34051 Corchorus olitorius HOM05D000086 ORTHO05D001065 5.1e-09 64.7 127 38.6
Hma1.2p1_0967F.1_g242230 Hydrangea macrophylla HOM05D000086 ORTHO05D001065 5.1e-09 64.7 122 36.9
Rhsim12G0163600 Rhododendron simsii HOM05D000157 ORTHO05D001065 5.1e-09 64.7 125 36.0
FvH4_5g05151 Fragaria vesca HOM05D000086 ORTHO05D001065 8.7e-09 63.9 124 39.5
FAN08G2608 Fragaria x ananassa HOM05D000086 ORTHO05D001065 8.7e-09 63.9 124 39.5
FAN13G0289 Fragaria x ananassa HOM05D000086 ORTHO05D001065 8.7e-09 63.9 124 39.5
FAN18G1744 Fragaria x ananassa HOM05D000086 ORTHO05D001065 8.7e-09 63.9 124 39.5
MD14G1183100 Malus domestica HOM05D000086 ORTHO05D001065 8.7e-09 63.9 124 36.3
Cfa019098 Carpinus fangiana HOM05D000086 ORTHO05D001065 1.1e-08 63.5 119 36.1
CiPaw.11G028400 Carya illinoinensis HOM05D000086 ORTHO05D001065 1.1e-08 63.5 125 36.0
Manes.17G122600 Manihot esculenta HOM05D000086 ORTHO05D001065 1.1e-08 63.5 116 34.5
Prupe.3G282900 Prunus persica HOM05D000086 ORTHO05D001065 1.5e-08 63.2 116 36.2
Sc10g0010090 Simmondsia chinensis HOM05D000086 ORTHO05D001065 1.5e-08 63.2 126 34.9
TPR.G30389 Trifolium pratense HOM05D000086 ORTHO05D001065 1.5e-08 63.2 107 40.2
Hma1.2p1_0802F.1_g220490 Hydrangea macrophylla HOM05D000086 ORTHO05D001065 1.9e-08 62.8 122 36.9
Sed0007300 Sechium edule HOM05D000086 ORTHO05D001065 2.5e-08 62.4 122 35.2
Ca_16194_v3 Cicer arietinum L. HOM05D000086 ORTHO05D001065 3.3e-08 62.0 94 50.0
Cfa007437 Carpinus fangiana HOM05D000086 ORTHO05D001065 4.3e-08 61.6 121 36.4
Duzib205G1408 Durio zibethinus HOM05D000086 ORTHO05D001065 4.3e-08 61.6 123 35.8
Migut.I00027 Erythranthe guttata HOM05D000086 ORTHO05D001065 4.3e-08 61.6 125 37.6
Psat5g114200 Pisum sativum HOM05D000086 ORTHO05D001065 4.3e-08 61.6 113 38.9
QL02p076837 Quercus lobata HOM05D000086 ORTHO05D001065 4.3e-08 61.6 123 37.4
TAR622G0426 Trochodendron aralioides HOM05D000086 ORTHO05D001065 4.3e-08 61.6 125 37.6
TAR622G0760 Trochodendron aralioides HOM05D000086 ORTHO05D001065 4.3e-08 61.6 125 37.6
Actinidia06031 Actinidia chinensis HOM05D000086 ORTHO05D001065 5.6e-08 61.2 109 33.9
Nn4g22815 Nelumbo nucifera HOM05D002398 ORTHO05D001065 7.3e-08 60.8 121 37.2
PSO017G0322 Papaver somniferum HOM05D000086 ORTHO05D001065 7.3e-08 60.8 131 34.4
ATR0691G277 Amborella trichopoda HOM05D000086 ORTHO05D001065 9.6e-08 60.5 121 35.5
PSO478G2048 Papaver somniferum HOM05D000086 ORTHO05D001065 9.6e-08 60.5 131 34.4
Prupe.5G175600 Prunus persica HOM05D000086 ORTHO05D001065 9.6e-08 60.5 126 37.3
Migut.H00134 Erythranthe guttata HOM05D000086 ORTHO05D001065 1.3e-07 60.1 131 38.2
Medtr3g078120 Medicago truncatula HOM05D000086 ORTHO05D001065 1.3e-07 60.1 111 36.9
TWI56G0617 Tripterygium wilfordii HOM05D000086 ORTHO05D001065 1.3e-07 60.1 121 35.5
ECA246G1421 Erigeron canadensis HOM05D000086 ORTHO05D001065 1.6e-07 59.7 124 38.7
Gohir.A09G025850 Gossypium hirsutum HOM05D000086 ORTHO05D001065 1.6e-07 59.7 124 35.5
PGR142G3558 Punica granatum HOM05D000086 ORTHO05D001065 1.6e-07 59.7 98 38.8
EL10Ac5g10775 Beta vulgaris HOM05D000086 ORTHO05D001065 2.1e-07 59.3 90 42.2
Gohir.D09G025150 Gossypium hirsutum HOM05D002398 ORTHO05D001065 2.8e-07 58.9 128 34.4
Phvul.004G017700 Phaseolus vulgaris HOM05D000086 ORTHO05D001065 2.8e-07 58.9 116 35.3
Glyma.13G170300 Glycine max HOM05D000086 ORTHO05D001065 3.6e-07 58.5 116 34.5
MSTRG.23120 Avicennia marina HOM05D000086 ORTHO05D001065 4.8e-07 58.2 126 34.9
Duzib147G0849 Durio zibethinus HOM05D000086 ORTHO05D001065 4.8e-07 58.2 119 34.5
Rhsim12G0163700 Rhododendron simsii HOM05D000086 ORTHO05D001065 4.8e-07 58.2 131 34.4
Glyma.04G181300 Glycine max HOM05D000086 ORTHO05D001065 6.2e-07 57.8 100 42.0
HanXRQChr16g0503701 Helianthus annuus HOM05D000086 ORTHO05D001065 6.2e-07 57.8 128 34.4
MD17G1035700 Malus domestica HOM05D000086 ORTHO05D001065 6.2e-07 57.8 130 35.4
Manes.06G103500 Manihot esculenta HOM05D000086 ORTHO05D001065 6.2e-07 57.8 93 41.9
CiPaw.03G036900 Carya illinoinensis HOM05D000086 ORTHO05D001065 8.1e-07 57.4 125 35.2
MELO3C002255.2 Cucumis melo HOM05D000086 ORTHO05D001065 8.1e-07 57.4 126 31.0
Manes.14G067200 Manihot esculenta HOM05D000086 ORTHO05D001065 8.1e-07 57.4 124 37.9
VMungo1309G2215 Vigna mungo HOM05D000086 ORTHO05D001065 8.1e-07 57.4 128 35.2
CANSAT54G1929 Cannabis sativa HOM05D000086 ORTHO05D001065 1.1e-06 57.0 131 32.1
PGR083G0977 Punica granatum HOM05D000086 ORTHO05D001065 1.1e-06 57.0 131 36.6
COL.COLO4_04777 Corchorus olitorius HOM05D000086 ORTHO05D001065 1.8e-06 56.2 122 32.0
Phvul.009G179700 Phaseolus vulgaris HOM05D000086 ORTHO05D001065 1.8e-06 56.2 123 35.8
Gorai.006G029300 Gossypium raimondii HOM05D000086 ORTHO05D001065 2.4e-06 55.8 124 33.9
TAR374G1721 Trochodendron aralioides HOM05D000086 ORTHO05D001065 2.4e-06 55.8 115 30.4
CSS0012672 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D001065 5.3e-06 54.7 113 32.7
vmacro16601 Vaccinium macrocarpon HOM05D000086 ORTHO05D001065 5.3e-06 54.7 91 40.7
MSTRG.24007 Avicennia marina HOM05D000086 ORTHO05D001065 6.9e-06 54.3 127 33.1
ClCG01G013040 Citrullus lanatus HOM05D000086 ORTHO05D001065 6.9e-06 54.3 129 34.1
ECA232G1710 Erigeron canadensis HOM05D000086 ORTHO05D001065 6.9e-06 54.3 128 30.5
PGR044G1823 Punica granatum HOM05D000086 ORTHO05D001065 6.9e-06 54.3 125 36.0
Nn3g16909 Nelumbo nucifera HOM05D000086 ORTHO05D001065 9.0e-06 53.9 125 36.0


User provided reference genes

Program Settings