Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021502 Daucus carota HOM05D001207 ORTHO05D009015 2.0e-71 272.3 137 100.0
DCAR_019349 Daucus carota HOM05D001207 ORTHO05D009015 5.5e-45 184.5 113 84.1
DCAR_018904 Daucus carota HOM05D001207 ORTHO05D009015 2.0e-42 176.0 86 100.0
Gohir.A06G048800 Gossypium hirsutum HOM05D001207 ORTHO05D009015 2.2e-41 172.6 113 77.9
Gorai.010G054600 Gossypium raimondii HOM05D001207 ORTHO05D009015 2.8e-41 172.2 113 77.0
Duzib168G0412 Durio zibethinus HOM05D001207 ORTHO05D009015 6.3e-41 171.0 113 76.1
Gohir.D06G048500 Gossypium hirsutum HOM05D001207 ORTHO05D009015 6.3e-41 171.0 113 77.0
Thecc.09G142600 Theobroma cacao HOM05D001207 ORTHO05D009015 1.1e-40 170.2 113 76.1
TWI34G1792 Tripterygium wilfordii HOM05D001207 ORTHO05D009015 1.8e-40 169.5 113 75.2
TAR636G2435 Trochodendron aralioides HOM05D001207 ORTHO05D009015 2.4e-40 169.1 113 75.2
CANSAT11G0601 Cannabis sativa HOM05D001207 ORTHO05D009015 5.3e-40 167.9 113 75.2
vmacro06110 Vaccinium macrocarpon HOM05D001207 ORTHO05D009015 5.3e-40 167.9 113 74.3
Rhsim03G0254100 Rhododendron simsii HOM05D001207 ORTHO05D009015 6.9e-40 167.5 113 74.3
COL.COLO4_24082 Corchorus olitorius HOM05D001207 ORTHO05D009015 1.2e-39 166.8 113 75.2
PGR142G3550 Punica granatum HOM05D001207 ORTHO05D009015 1.2e-39 166.8 113 75.2
CAN.G551.23 Capsicum annuum HOM05D001207 ORTHO05D009015 1.5e-39 166.4 113 71.7
Manes.14G139700 Manihot esculenta HOM05D001207 ORTHO05D009015 1.5e-39 166.4 113 72.6
QL02p091447 Quercus lobata HOM05D001207 ORTHO05D009015 2.6e-39 165.6 113 72.6
GSVIVG01001035001 Vitis vinifera HOM05D001207 ORTHO05D009015 3.4e-39 165.2 113 73.5
Aqoxy7G02296 Aquilegia oxysepala HOM05D001207 ORTHO05D009015 4.5e-39 164.9 113 73.5
Dinv42907 Davidia involucrata HOM05D001207 ORTHO05D009015 7.7e-39 164.1 113 73.5
Dinv43194 Davidia involucrata HOM05D001207 ORTHO05D009015 7.7e-39 164.1 113 73.5
FAN26G2247 Fragaria x ananassa HOM05D001207 ORTHO05D009015 1.0e-38 163.7 113 74.3
MSTRG.26312 Avicennia marina HOM05D001207 ORTHO05D009015 1.3e-38 163.3 113 74.3
CSS0026722 Camellia sinensis var. sinensis HOM05D001207 ORTHO05D009015 1.3e-38 163.3 113 72.6
CSS0029501 Camellia sinensis var. sinensis HOM05D001207 ORTHO05D009015 1.3e-38 163.3 113 72.6
Ciclev10007794m.g Citrus clementina HOM05D001207 ORTHO05D009015 1.3e-38 163.3 113 71.7
FvH4_1g01570 Fragaria vesca HOM05D000238 ORTHO05D009015 1.3e-38 163.3 113 73.5
FAN19G3000 Fragaria x ananassa HOM05D001207 ORTHO05D009015 1.3e-38 163.3 113 73.5
FAN28G1069 Fragaria x ananassa HOM05D000238 ORTHO05D009015 1.3e-38 163.3 113 73.5
MD02G1012500 Malus domestica HOM05D001207 ORTHO05D009015 1.3e-38 163.3 113 73.5
Nitab4.5_0001751g0080 Nicotiana tabacum HOM05D001207 ORTHO05D009015 1.3e-38 163.3 113 69.9
Nitab4.5_0005330g0050 Nicotiana tabacum HOM05D001207 ORTHO05D009015 1.3e-38 163.3 113 69.9
Atru.chr7.251 Acer truncatum HOM05D001207 ORTHO05D009015 1.7e-38 162.9 113 73.5
Nn8g39732 Nelumbo nucifera HOM05D001207 ORTHO05D009015 1.7e-38 162.9 113 71.7
RcHm_v2.0_Chr2g0086531 Rosa chinensis HOM05D001207 ORTHO05D009015 1.7e-38 162.9 113 74.3
Prupe.7G253500 Prunus persica HOM05D001207 ORTHO05D009015 2.2e-38 162.5 113 74.3
Sed0001389 Sechium edule HOM05D001207 ORTHO05D009015 2.2e-38 162.5 113 70.8
SEGI_19852 Sequoiadendron giganteum HOM05D001207 ORTHO05D009015 2.2e-38 162.5 116 69.8
CsaV3_2G003460 Cucumis sativus L. HOM05D001207 ORTHO05D009015 2.9e-38 162.2 113 69.0
ATR0629G027 Amborella trichopoda HOM05D001207 ORTHO05D009015 3.8e-38 161.8 113 69.9
FAN23G1325 Fragaria x ananassa HOM05D001207 ORTHO05D009015 3.8e-38 161.8 113 73.5
Peaxi162Scf00177g00814 Petunia axillaris HOM05D001207 ORTHO05D009015 3.8e-38 161.8 126 65.9
Lj9A710G64 Lonicera japonica HOM05D001207 ORTHO05D009015 5.0e-38 161.4 113 71.7
Potri.018G113400 Populus trichocarpa HOM05D001207 ORTHO05D009015 6.5e-38 161.0 113 72.6
Sabra18G0096400 Salix brachista HOM05D000238 ORTHO05D001889 6.5e-38 161.0 113 70.8
Solyc12g010380.3 Solanum lycopersicum HOM05D001207 ORTHO05D009015 6.5e-38 161.0 113 69.0
AL7G44010 Arabidopsis lyrata HOM05D001207 ORTHO05D009015 8.5e-38 160.6 113 72.6
CARHR217250 Cardamine hirsuta HOM05D001207 ORTHO05D009015 8.5e-38 160.6 113 72.6
Cc06_g07370 Coffea canephora HOM05D001207 ORTHO05D009015 8.5e-38 160.6 116 69.8
MELO3C004452.2 Cucumis melo HOM05D001207 ORTHO05D009015 8.5e-38 160.6 113 67.3
HPP92_003923 Vanilla planifolia HOM05D001207 ORTHO05D002396 8.5e-38 160.6 113 72.6
AUR62011265 Chenopodium quinoa HOM05D001207 ORTHO05D009015 1.1e-37 160.2 113 72.6
AUR62041441 Chenopodium quinoa HOM05D001207 ORTHO05D009015 1.1e-37 160.2 113 72.6
AUR62043763 Chenopodium quinoa HOM05D001207 ORTHO05D009015 1.1e-37 160.2 113 72.6
CiPaw.16G117200 Carya illinoinensis HOM05D001207 ORTHO05D009015 1.4e-37 159.8 113 69.9
Oeu040777.3 Olea europaea HOM05D001207 ORTHO05D009015 1.4e-37 159.8 113 71.7
PSO017G4960 Papaver somniferum HOM05D001207 ORTHO05D009015 1.4e-37 159.8 113 70.8
Sc08g0004930 Simmondsia chinensis HOM05D001207 ORTHO05D009015 1.4e-37 159.8 114 70.2
SGA_v2.0_scaffold183G39863 Striga asiatica HOM05D001207 ORTHO05D009015 1.4e-37 159.8 116 69.8
Zm00001eb177670 Zea mays HOM05D001207 ORTHO05D009015 1.9e-37 159.5 116 67.2
EL10Ac8g18828 Beta vulgaris HOM05D001207 ORTHO05D009015 2.5e-37 159.1 113 71.7
Eucgr.C00416 Eucalyptus grandis HOM05D001207 ORTHO05D009015 2.5e-37 159.1 113 70.8
Ah.11g040880 Amaranthus hybridus HOM05D001207 ORTHO05D009015 3.2e-37 158.7 116 68.1
BcaB04g18058 Brassica carinata HOM05D001207 ORTHO05D009015 3.2e-37 158.7 113 70.8
BcaC07g37674 Brassica carinata HOM05D001207 ORTHO05D009015 4.2e-37 158.3 113 70.8
BolC8t48045H Brassica oleracea HOM05D001207 ORTHO05D009015 4.2e-37 158.3 113 70.8
Glyma.09G096800 Glycine max HOM05D001207 ORTHO05D009015 4.2e-37 158.3 113 72.6
Lsat_1_v5_gn_5_90580 Lactuca sativa HOM05D001207 ORTHO05D009015 4.2e-37 158.3 113 71.7
Sopen12g005390 Solanum pennellii HOM05D001207 ORTHO05D009015 4.2e-37 158.3 113 67.3
ECA234G4327 Erigeron canadensis HOM05D001207 ORTHO05D009015 5.5e-37 157.9 113 72.6
Lalb_Chr23g0275791 Lupinus albus HOM05D001207 ORTHO05D009015 5.5e-37 157.9 113 71.7
AT5G35170 Arabidopsis thaliana HOM05D001207 ORTHO05D009015 7.2e-37 157.5 113 70.8
A08p09620 Brassica napus HOM05D001207 ORTHO05D009015 7.2e-37 157.5 113 70.8
BraA08t32959Z Brassica rapa HOM05D001207 ORTHO05D009015 7.2e-37 157.5 113 70.8
CDE10G0689 Ceratophyllum demersum HOM05D001207 ORTHO05D009015 7.2e-37 157.5 113 69.9
Migut.K00366 Erythranthe guttata HOM05D001207 ORTHO05D009015 7.2e-37 157.5 113 68.1
Os08g0288200 Oryza sativa ssp. japonica HOM05D001207 ORTHO05D009015 7.2e-37 157.5 116 68.1
Cfa020877 Carpinus fangiana HOM05D001207 ORTHO05D009015 9.4e-37 157.1 113 68.1
Haze_19308 Corylus avellana HOM05D001207 ORTHO05D009015 9.4e-37 157.1 113 68.1
Glyma.15G203100 Glycine max HOM05D001207 ORTHO05D009015 9.4e-37 157.1 113 71.7
VMungo1309G0472 Vigna mungo HOM05D001207 ORTHO05D009015 1.2e-36 156.8 113 70.8
Carub.0007s3100 Capsella rubella HOM05D001207 ORTHO05D009015 1.6e-36 156.4 113 69.9
Aa31sc222G100 Aethionema arabicum HOM05D001207 ORTHO05D009015 2.1e-36 156.0 113 71.7
Thhalv10003444m.g Eutrema salsugineum HOM05D001207 ORTHO05D009015 2.1e-36 156.0 113 69.9
Phvul.009G208900 Phaseolus vulgaris HOM05D001207 ORTHO05D009015 2.1e-36 156.0 113 70.8
TPR.G22801 Trifolium pratense HOM05D001207 ORTHO05D009015 7.9e-36 154.1 113 69.9
Lj5g0002827 Lotus japonicus HOM05D001207 ORTHO05D009015 1.4e-35 153.3 113 69.0
unitig_62.g23479 Utricularia gibba HOM05D001207 ORTHO05D009015 1.4e-35 153.3 113 67.3
arahy.Tifrunner.gnm1.ann1.HFL4GJ Arachis hypogaea HOM05D001207 ORTHO05D009015 3.0e-35 152.1 113 69.0
Sp7g07210 Schrenkiella parvula HOM05D001207 ORTHO05D009015 3.9e-35 151.8 113 69.0
Psat1g022840 Pisum sativum HOM05D001207 ORTHO05D009015 6.7e-35 151.0 113 67.3
arahy.Tifrunner.gnm1.ann1.TBA1JX Arachis hypogaea HOM05D001207 ORTHO05D009015 8.8e-35 150.6 113 68.1
Medtr2g461290 Medicago truncatula HOM05D001207 ORTHO05D009015 8.8e-35 150.6 113 68.1
ClCG11G003640 Citrullus lanatus HOM05D001207 ORTHO05D009015 1.5e-34 149.8 130 58.5
Ca_03887_v3 Cicer arietinum L. HOM05D001207 ORTHO05D009015 3.3e-34 148.7 113 67.3
AagrBONN_evm.TU.Sc2ySwM_344.1402 Anthoceros agrestis HOM05D001207 ORTHO05D009015 4.4e-34 148.3 113 62.8
SMO356G0649 Selaginella moellendorffii HOM05D001207 ORTHO05D009015 4.1e-32 141.7 116 61.2
Mapoly0139s0019 Marchantia polymorpha HOM05D001207 ORTHO05D009015 1.0e-30 137.1 113 59.3
Pp3c23_18090 Physcomitrium patens HOM05D001207 ORTHO05D009015 5.0e-30 134.8 113 59.3
CAN.G444.3 Capsicum annuum HOM05D001207 ORTHO05D009015 3.8e-22 108.6 103 59.2
Actinidia38703 Actinidia chinensis HOM05D001207 ORTHO05D009015 6.1e-20 101.3 102 55.9
MCO16G216 Micromonas commoda HOM05D001207 ORTHO05D009015 1.1e-16 90.5 112 43.8
CAN.G61.14 Capsicum annuum HOM05D001673 ORTHO05D009015 5.3e-16 88.2 81 58.0
Pp3c23_18091 Physcomitrium patens HOM05D001207 ORTHO05D009015 3.5e-15 85.5 102 49.0
HPP92_003781 Vanilla planifolia HOM05D001207 ORTHO05D009015 1.7e-14 83.2 65 66.2
Cpa.g.sc397.8 Carica papaya HOM05D001207 ORTHO05D009015 8.5e-14 80.9 50 72.0
CBR_g41085 Chara braunii HOM05D001207 ORTHO05D009015 7.5e-10 67.8 49 63.3
PRCOL_00002653 Prasinoderma coloniale HOM05D001207 ORTHO05D009015 1.6e-07 60.1 94 35.1


User provided reference genes

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