Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 7.1e-164 580.5 283 100.0
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 2.1e-131 472.6 307 74.6
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 2.1e-131 472.6 307 73.6
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.3e-130 469.9 307 73.3
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 2.3e-130 469.2 307 74.6
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 2.3e-130 469.2 307 74.9
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 8.7e-130 467.2 307 74.6
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 8.7e-130 467.2 307 72.6
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.1e-129 466.8 307 73.9
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.5e-129 466.5 307 72.6
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 2.5e-129 465.7 307 72.6
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 3.3e-129 465.3 307 73.9
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 3.3e-129 465.3 307 73.6
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 4.3e-129 464.9 307 74.6
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 2.8e-128 462.2 307 74.6
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 4.8e-128 461.5 307 73.3
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 6.9e-127 457.6 307 74.3
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 9.1e-127 457.2 307 72.3
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 2.0e-126 456.1 307 73.6
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 2.0e-126 456.1 307 72.6
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.0e-125 453.8 307 72.3
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.3e-125 453.4 307 71.0
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.3e-125 453.4 307 72.0
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.7e-125 453.0 307 71.7
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.9e-125 452.2 307 72.6
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 3.8e-125 451.8 307 70.7
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 5.0e-125 451.4 307 71.7
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 6.5e-125 451.1 307 72.0
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 8.5e-125 450.7 307 72.3
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 8.5e-125 450.7 307 72.3
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 8.5e-125 450.7 307 71.7
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.4e-124 449.9 307 71.7
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 4.2e-124 448.4 283 76.3
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 7.2e-124 447.6 307 71.0
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 7.2e-124 447.6 358 65.4
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 7.2e-124 447.6 307 70.4
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 4.7e-123 444.9 304 70.7
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 7.9e-123 444.1 371 61.2
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 3.0e-122 442.2 288 75.0
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 3.0e-122 442.2 307 70.7
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 3.0e-122 442.2 307 70.7
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 3.9e-122 441.8 307 69.4
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 1.1e-121 440.3 307 69.4
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 2.0e-121 439.5 307 68.7
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 9.7e-121 437.2 307 69.1
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.3e-120 434.5 307 68.7
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 2.4e-119 432.6 307 69.4
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 5.3e-119 431.4 307 68.7
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 4.5e-118 428.3 307 68.4
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.8e-117 425.2 323 65.3
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 1.1e-116 423.7 307 67.8
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.4e-116 423.3 307 68.4
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.4e-116 423.3 307 66.8
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 2.5e-116 422.5 307 68.1
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 3.2e-116 422.2 307 65.8
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 3.2e-116 422.2 307 66.4
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 5.5e-116 421.4 307 66.4
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 9.4e-116 420.6 306 65.0
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 1.6e-115 419.9 307 67.1
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 2.1e-115 419.5 307 67.1
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 2.7e-115 419.1 370 58.4
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 4.7e-115 418.3 307 65.8
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 6.1e-115 417.9 307 67.1
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 1.0e-114 417.2 307 67.8
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 1.4e-114 416.8 307 63.5
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 1.8e-114 416.4 307 67.4
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 6.7e-114 414.5 391 55.8
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 9.7e-113 410.6 307 66.1
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.3e-112 410.2 307 64.2
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.7e-112 408.7 306 63.4
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 1.4e-111 406.8 307 65.5
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.4e-111 406.0 307 63.5
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 9.4e-108 394.0 277 69.0
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.2e-107 393.7 278 69.4
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.0e-105 386.3 277 68.2
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 9.1e-103 377.5 285 67.0
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.0e-102 376.3 293 65.2
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 3.5e-102 375.6 277 66.8
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.3e-101 373.6 276 66.3
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 6.8e-98 361.3 310 58.7
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 7.5e-97 357.8 293 60.4
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 9.8e-97 357.5 283 65.0
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 8.3e-96 354.4 203 81.3
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 1.6e-94 350.1 312 56.7
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 6.5e-93 344.7 243 68.3
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 8.9e-90 334.3 306 53.6
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 5.0e-85 318.5 297 54.5
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.9e-84 316.6 209 71.3
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.5e-76 290.4 239 62.8
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 2.3e-66 256.5 315 45.1
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.4e-58 230.7 148 75.0
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.3e-56 224.2 170 70.0
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 3.3e-52 209.5 190 52.6
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 1.2e-51 207.6 197 55.3
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 1.1e-47 194.5 310 37.1
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 2.8e-43 179.9 282 37.9
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 1.5e-36 157.5 135 57.0
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 3.0e-21 106.7 71 67.6
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.2e-19 100.5 88 59.1
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.4e-17 93.2 289 27.7
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 3.2e-15 86.7 72 58.3
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 1.1e-12 78.2 97 39.2
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 6.5e-08 62.4 39 79.5


User provided reference genes

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