Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 3.6e-65 251.9 174 100.0
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 8.8e-32 141.0 167 67.7
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.5e-31 140.2 167 69.5
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 2.0e-31 139.8 167 70.1
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.0e-31 139.8 167 70.1
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 2.6e-31 139.4 168 69.0
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 4.4e-31 138.7 167 70.7
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 9.8e-31 137.5 166 66.9
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 2.2e-30 136.3 167 67.7
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 8.3e-30 134.4 171 70.2
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 8.3e-30 134.4 167 67.7
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 8.3e-30 134.4 165 68.5
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.1e-29 134.0 167 67.7
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 1.1e-29 134.0 142 73.9
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 1.8e-29 133.3 140 76.4
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 2.4e-29 132.9 136 78.7
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 4.1e-29 132.1 172 68.6
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 5.4e-29 131.7 166 66.3
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 5.4e-29 131.7 167 67.7
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 7.0e-29 131.3 160 69.4
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 7.0e-29 131.3 132 81.8
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 9.1e-29 131.0 167 67.1
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 1.6e-28 130.2 165 68.5
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 1.6e-28 130.2 165 66.1
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 1.6e-28 130.2 132 78.8
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 2.7e-28 129.4 170 64.7
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 4.5e-28 128.6 165 69.1
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 4.5e-28 128.6 169 67.5
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 4.5e-28 128.6 167 68.9
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 1.0e-27 127.5 136 77.2
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 1.0e-27 127.5 136 77.2
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 1.3e-27 127.1 136 76.5
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.3e-27 127.1 167 65.9
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.3e-27 127.1 141 75.2
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.7e-27 126.7 144 73.6
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 2.3e-27 126.3 141 74.5
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.3e-27 126.3 132 76.5
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 2.3e-27 126.3 166 66.3
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 2.9e-27 125.9 167 67.1
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 2.9e-27 125.9 132 77.3
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 2.9e-27 125.9 170 67.6
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 2.9e-27 125.9 142 73.2
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 3.8e-27 125.6 140 74.3
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 5.0e-27 125.2 141 73.8
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 5.0e-27 125.2 172 65.7
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 5.0e-27 125.2 129 65.1
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 5.0e-27 125.2 150 70.0
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 6.5e-27 124.8 132 77.3
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.1e-26 124.0 140 74.3
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 1.1e-26 124.0 141 73.8
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 1.1e-26 124.0 141 73.8
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 1.1e-26 124.0 171 64.9
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 1.1e-26 124.0 166 66.9
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 1.5e-26 123.6 136 73.5
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 2.5e-26 122.9 168 66.1
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 2.5e-26 122.9 131 79.4
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 2.5e-26 122.9 174 64.4
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 3.3e-26 122.5 134 75.4
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 4.2e-26 122.1 114 82.5
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 4.2e-26 122.1 114 82.5
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 4.2e-26 122.1 132 78.0
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 7.2e-26 121.3 165 65.5
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 7.2e-26 121.3 134 76.9
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 7.2e-26 121.3 134 76.1
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 7.2e-26 121.3 150 71.3
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.2e-25 120.6 151 72.2
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.6e-25 120.2 137 71.5
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 8.0e-25 117.9 169 63.3
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.0e-24 117.5 167 63.5
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 1.8e-24 116.7 152 67.8
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.8e-24 116.7 129 74.4
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 2.3e-24 116.3 167 63.5
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 2.3e-24 116.3 157 67.5
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 4.0e-24 115.5 136 71.3
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 8.9e-24 114.4 165 64.8
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 8.9e-24 114.4 129 72.9
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 2.0e-23 113.2 170 60.0
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 3.4e-23 112.5 131 67.9
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 7.5e-23 111.3 164 64.6
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 1.7e-22 110.2 119 82.4
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.2e-22 109.8 129 72.1
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 2.8e-22 109.4 159 42.8
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 4.9e-22 108.6 113 77.0
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 2.4e-21 106.3 143 45.5
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.2e-20 104.0 103 58.3
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 1.6e-20 103.6 132 71.2
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 2.0e-20 103.2 130 70.8
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 7.8e-20 101.3 112 50.9
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 2.3e-19 99.8 78 67.9
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 8.6e-19 97.8 104 60.6
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.5e-18 97.1 169 56.2
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 1.9e-18 96.7 151 62.3
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 3.6e-17 92.4 173 55.5
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 3.0e-16 89.4 129 68.2
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 9.8e-15 84.3 141 66.0
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 2.9e-14 82.8 130 43.8
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 4.9e-14 82.0 89 71.9
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 2.4e-13 79.7 137 57.7
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.3e-11 73.2 105 38.1
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 1.9e-10 70.1 81 46.9
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 6.2e-09 65.1 38 73.7
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.0e-07 60.1 164 50.6
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 6.4e-06 55.1 29 86.2


User provided reference genes

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