Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021377 Daucus carota HOM05D003613 ORTHO05D004055 2.9e-51 204.9 102 100.0
DCAR_021376 Daucus carota HOM05D003613 ORTHO05D004055 2.0e-31 139.0 103 72.8
DCAR_025611 Daucus carota HOM05D003613 ORTHO05D004055 9.8e-31 136.7 100 67.0
Dinv21437 Davidia involucrata HOM05D003613 ORTHO05D004055 6.8e-24 114.0 101 60.4
Oeu051549.1 Olea europaea HOM05D003613 ORTHO05D004055 2.8e-22 108.6 103 59.2
Cc04_g05380 Coffea canephora HOM05D003613 ORTHO05D004055 1.1e-21 106.7 87 62.1
ECA247G1662 Erigeron canadensis HOM05D003613 ORTHO05D004055 2.4e-21 105.5 99 56.6
Rhsim12G0183300 Rhododendron simsii HOM05D003613 ORTHO05D004055 9.2e-21 103.6 84 60.7
MSTRG.22838 Avicennia marina HOM05D003613 ORTHO05D004055 1.6e-20 102.8 103 53.4
HanXRQChr04g0100011 Helianthus annuus HOM05D003613 ORTHO05D004055 2.0e-20 102.4 99 54.5
Potri.003G186400 Populus trichocarpa HOM05D003613 ORTHO05D004055 2.0e-20 102.4 100 55.0
ECA232G3259 Erigeron canadensis HOM05D003613 ORTHO05D004055 3.5e-20 101.7 99 53.5
MSTRG.11218 Avicennia marina HOM05D003613 ORTHO05D004055 7.8e-20 100.5 87 56.3
Potri.001G038200 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.8e-20 100.5 100 57.0
Potri.001G038750 Populus trichocarpa HOM05D003613 ORTHO05D004055 7.8e-20 100.5 100 57.0
SGA_v2.0_scaffold515G52657 Striga asiatica HOM05D003613 ORTHO05D004055 1.3e-19 99.8 88 60.2
Lsat_1_v5_gn_5_9061 Lactuca sativa HOM05D003613 ORTHO05D004055 1.7e-19 99.4 85 58.8
ECA246G2284 Erigeron canadensis HOM05D003613 ORTHO05D004055 3.8e-19 98.2 85 61.2
HanXRQChr05g0157501 Helianthus annuus HOM05D003613 ORTHO05D004055 5.0e-19 97.8 86 60.5
Oeu033454.1 Olea europaea HOM05D003613 ORTHO05D004055 5.0e-19 97.8 88 58.0
Potri.001G040300 Populus trichocarpa HOM05D003613 ORTHO05D004055 5.0e-19 97.8 100 56.0
TWI75G1756 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 6.6e-19 97.4 89 60.7
Duzib192G0866 Durio zibethinus HOM05D003613 ORTHO05D004055 8.6e-19 97.1 98 53.1
vmacro19080 Vaccinium macrocarpon HOM05D003613 ORTHO05D004055 8.6e-19 97.1 85 54.1
Atru.chr1.2819 Acer truncatum HOM05D003613 ORTHO05D004055 1.1e-18 96.7 81 64.2
Lsat_1_v5_gn_4_84900 Lactuca sativa HOM05D003613 ORTHO05D004055 1.1e-18 96.7 99 52.5
Peaxi162Scf00195g00118 Petunia axillaris HOM05D003613 ORTHO05D004055 1.1e-18 96.7 80 61.2
PGSC0003DMG400014438 Solanum tuberosum HOM05D003613 ORTHO05D004055 1.1e-18 96.7 104 52.9
RcHm_v2.0_Chr2g0131951 Rosa chinensis HOM05D003613 ORTHO05D004055 1.5e-18 96.3 100 53.0
VMungo0540G1949 Vigna mungo HOM05D003613 ORTHO05D004055 1.5e-18 96.3 98 53.1
Haze_15237 Corylus avellana HOM05D003613 ORTHO05D004055 1.9e-18 95.9 98 56.1
Rhsim08G0202400 Rhododendron simsii HOM05D003613 ORTHO05D004055 1.9e-18 95.9 97 51.5
SGA_v2.0_scaffold74G24606 Striga asiatica HOM05D003613 ORTHO05D004055 1.9e-18 95.9 104 52.9
CAN.G1008.14 Capsicum annuum HOM05D003613 ORTHO05D004055 2.5e-18 95.5 104 51.9
TWI31G1088 Tripterygium wilfordii HOM05D003613 ORTHO05D004055 2.5e-18 95.5 80 63.8
Duzib160G0323 Durio zibethinus HOM05D003613 ORTHO05D004055 3.3e-18 95.1 98 51.0
FAN02G4453 Fragaria x ananassa HOM05D003613 ORTHO05D004055 3.3e-18 95.1 79 59.5
Solyc12g042540.1 Solanum lycopersicum HOM05D003613 ORTHO05D004055 3.3e-18 95.1 104 51.9
Sopen12g021630 Solanum pennellii HOM05D003613 ORTHO05D004055 3.3e-18 95.1 104 51.9
PGSC0003DMG400014217 Solanum tuberosum HOM05D003613 ORTHO05D004055 3.3e-18 95.1 104 52.9
TAR383G0763 Trochodendron aralioides HOM05D003613 ORTHO05D004055 3.3e-18 95.1 100 52.0
Cfa004173 Carpinus fangiana HOM05D003613 ORTHO05D004055 4.3e-18 94.7 98 56.1
Ciclev10026842m.g Citrus clementina HOM05D003613 ORTHO05D004055 4.3e-18 94.7 98 55.1
Haze_16413 Corylus avellana HOM05D003613 ORTHO05D004055 4.3e-18 94.7 98 55.1
Haze_16416 Corylus avellana HOM05D003613 ORTHO05D004055 4.3e-18 94.7 98 55.1
Glyma.15G063700 Glycine max HOM05D003613 ORTHO05D004055 4.3e-18 94.7 98 52.0
Gohir.A06G141700 Gossypium hirsutum HOM05D003613 ORTHO05D004055 5.6e-18 94.4 88 55.7
Potri.001G039700 Populus trichocarpa HOM05D003613 ORTHO05D004055 5.6e-18 94.4 81 59.3
Sopen03g036670 Solanum pennellii HOM05D003613 ORTHO05D004055 5.6e-18 94.4 78 61.5
Actinidia36859 Actinidia chinensis HOM05D000338 ORTHO05D003721 7.3e-18 94.0 76 60.5
Sabra03G0136400 Salix brachista HOM05D003613 ORTHO05D004055 7.3e-18 94.0 90 55.6
Thecc.06G133700 Theobroma cacao HOM05D003613 ORTHO05D004055 7.3e-18 94.0 87 57.5
MSTRG.9389 Avicennia marina HOM05D003613 ORTHO05D004055 9.5e-18 93.6 103 46.6
Glyma.01G154800 Glycine max HOM05D003613 ORTHO05D004055 9.5e-18 93.6 98 51.0
Nn8g40130 Nelumbo nucifera HOM05D003613 ORTHO05D004055 9.5e-18 93.6 100 49.0
Phvul.006G195900 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 9.5e-18 93.6 98 52.0
GSVIVG01016088001 Vitis vinifera HOM05D003613 ORTHO05D004055 9.5e-18 93.6 87 52.9
Duzib235G1294 Durio zibethinus HOM05D003613 ORTHO05D004055 1.2e-17 93.2 98 52.0
Gohir.D06G146000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.2e-17 93.2 88 54.5
Gorai.010G170200 Gossypium raimondii HOM05D003613 ORTHO05D004055 1.2e-17 93.2 88 54.5
Glyma.13G250700 Glycine max HOM05D003613 ORTHO05D004055 2.1e-17 92.4 98 51.0
Lalb_Chr20g0122601 Lupinus albus HOM05D003613 ORTHO05D004055 2.1e-17 92.4 81 55.6
Prupe.3G105500 Prunus persica HOM05D003613 ORTHO05D004055 2.1e-17 92.4 98 54.1
CiPaw.01G052100 Carya illinoinensis HOM05D003613 ORTHO05D004055 2.8e-17 92.0 98 54.1
MD17G1228300 Malus domestica HOM05D003613 ORTHO05D004055 2.8e-17 92.0 98 55.1
Nitab4.5_0005437g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 2.8e-17 92.0 85 57.6
CsaV3_7G031790 Cucumis sativus L. HOM05D003613 ORTHO05D004055 6.1e-17 90.9 98 53.1
Glyma.08G062200 Glycine max HOM05D003613 ORTHO05D004055 6.1e-17 90.9 99 54.5
MD09G1229400 Malus domestica HOM05D003613 ORTHO05D004055 6.1e-17 90.9 98 54.1
Glyma.07G187000 Glycine max HOM05D003613 ORTHO05D004055 1.0e-16 90.1 84 57.1
Manes.04G099000 Manihot esculenta HOM05D003613 ORTHO05D004055 1.0e-16 90.1 102 54.9
Manes.11G070600 Manihot esculenta HOM05D003613 ORTHO05D004055 1.0e-16 90.1 100 52.0
Gohir.A10G049000 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.4e-16 89.7 75 58.7
Gohir.D09G076100 Gossypium hirsutum HOM05D003613 ORTHO05D004055 1.4e-16 89.7 98 51.0
Sabra03G0136500 Salix brachista HOM05D003613 ORTHO05D004055 1.4e-16 89.7 90 52.2
CSS0042010 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 1.8e-16 89.4 83 54.2
ClCG09G003430 Citrullus lanatus HOM05D003613 ORTHO05D004055 1.8e-16 89.4 85 55.3
Lj6g0025627 Lotus japonicus HOM05D003613 ORTHO05D004055 1.8e-16 89.4 98 49.0
Cpa.g.sc68.45 Carica papaya HOM05D003613 ORTHO05D004055 2.3e-16 89.0 98 51.0
Gorai.006G091300 Gossypium raimondii HOM05D003613 ORTHO05D004055 2.3e-16 89.0 98 51.0
Gohir.D10G049600 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.0e-16 88.6 75 57.3
Gorai.011G053100 Gossypium raimondii HOM05D003613 ORTHO05D004055 3.0e-16 88.6 75 57.3
COL.COLO4_30901 Corchorus olitorius HOM05D003613 ORTHO05D004055 5.2e-16 87.8 101 49.5
Lalb_Chr19g0125611 Lupinus albus HOM05D003613 ORTHO05D004055 5.2e-16 87.8 96 52.1
Nitab4.5_0002700g0020 Nicotiana tabacum HOM05D003613 ORTHO05D004055 5.2e-16 87.8 82 57.3
Sed0006875 Sechium edule HOM05D003613 ORTHO05D004055 5.2e-16 87.8 101 52.5
MELO3C029246.2 Cucumis melo HOM05D003613 ORTHO05D004055 6.8e-16 87.4 98 51.0
CsaV3_3G032670 Cucumis sativus L. HOM05D003613 ORTHO05D004055 8.9e-16 87.0 99 52.5
Glyma.15G176700 Glycine max HOM05D003613 ORTHO05D004055 8.9e-16 87.0 98 50.0
SalBow1G4637 Salvia bowleyana HOM05D003613 ORTHO05D004055 1.2e-15 86.7 86 54.7
Migut.I00632 Erythranthe guttata HOM05D003613 ORTHO05D004055 2.0e-15 85.9 91 52.7
arahy.Tifrunner.gnm1.ann1.T22GZM Arachis hypogaea HOM05D003613 ORTHO05D004055 3.4e-15 85.1 86 50.0
ClCG10G012830 Citrullus lanatus HOM05D003613 ORTHO05D004055 3.4e-15 85.1 99 51.5
MELO3C024884.2 Cucumis melo HOM05D003613 ORTHO05D004055 3.4e-15 85.1 99 51.5
Gohir.A09G076160 Gossypium hirsutum HOM05D003613 ORTHO05D004055 3.4e-15 85.1 98 50.0
Sed0021976 Sechium edule HOM05D003613 ORTHO05D004055 3.4e-15 85.1 86 52.3
Ca_00210_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 4.4e-15 84.7 82 51.2
MBI14_g16433_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 4.4e-15 84.7 84 53.6
Phvul.002G218400 Phaseolus vulgaris HOM05D003613 ORTHO05D004055 4.4e-15 84.7 98 51.0
Sed0012530 Sechium edule HOM05D003613 ORTHO05D004055 4.4e-15 84.7 81 58.0
Eucgr.F03989 Eucalyptus grandis HOM05D003613 ORTHO05D004055 7.5e-15 84.0 82 61.0
Medtr2g010880 Medicago truncatula HOM05D003613 ORTHO05D004055 7.5e-15 84.0 82 50.0
TPR.G32634 Trifolium pratense HOM05D003613 ORTHO05D004055 9.8e-15 83.6 83 51.8
Aqoxy5G00706 Aquilegia oxysepala HOM05D003613 ORTHO05D004055 1.3e-14 83.2 98 45.9
Carub.0002s2654 Capsella rubella HOM05D003613 ORTHO05D004055 1.7e-14 82.8 101 48.5
MBI15_g26076_MAGBIO Magnolia biondii HOM05D003613 ORTHO05D004055 1.7e-14 82.8 85 52.9
unitig_22.g6276 Utricularia gibba HOM05D003613 ORTHO05D004055 1.7e-14 82.8 103 44.7
arahy.Tifrunner.gnm1.ann1.DB50AT Arachis hypogaea HOM05D003613 ORTHO05D004055 2.2e-14 82.4 80 52.5
Os08g0266200 Oryza sativa ssp. japonica HOM05D003613 ORTHO05D004055 2.2e-14 82.4 100 47.0
Lalb_Chr16g0383261 Lupinus albus HOM05D003613 ORTHO05D004055 4.9e-14 81.3 100 48.0
Nn2g12477 Nelumbo nucifera HOM05D003613 ORTHO05D004055 4.9e-14 81.3 103 47.6
THA.LOC104813597 Tarenaya hassleriana HOM05D003613 ORTHO05D004055 4.9e-14 81.3 84 50.0
unitig_8.g3041 Utricularia gibba HOM05D003613 ORTHO05D004055 4.9e-14 81.3 103 43.7
Carub.0001s1593 Capsella rubella HOM05D003613 ORTHO05D004055 6.4e-14 80.9 101 50.5
Thhalv10019378m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 6.4e-14 80.9 101 47.5
Psat1g210880 Pisum sativum HOM05D003613 ORTHO05D004055 8.3e-14 80.5 82 48.8
arahy.Tifrunner.gnm1.ann1.M9YY7V Arachis hypogaea HOM05D003613 ORTHO05D004055 1.1e-13 80.1 69 56.5
Migut.D01149 Erythranthe guttata HOM05D003613 ORTHO05D004055 1.1e-13 80.1 101 46.5
Sp5g34740 Schrenkiella parvula HOM05D003613 ORTHO05D004055 1.1e-13 80.1 101 47.5
AL1G28300 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.4e-13 79.7 101 47.5
AL2G40350 Arabidopsis lyrata HOM05D003613 ORTHO05D004055 1.8e-13 79.3 99 48.5
arahy.Tifrunner.gnm1.ann1.XPM13Z Arachis hypogaea HOM05D003613 ORTHO05D004055 1.8e-13 79.3 81 50.6
Aa31LG7G710 Aethionema arabicum HOM05D003613 ORTHO05D004055 2.4e-13 79.0 90 50.0
AT1G16170 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 2.4e-13 79.0 101 49.5
FAN14G0884 Fragaria x ananassa HOM05D008004 ORTHO05D004055 2.4e-13 79.0 87 51.7
TPR.G13916 Trifolium pratense HOM05D003613 ORTHO05D004055 3.2e-13 78.6 73 53.4
ATR0580G444 Amborella trichopoda HOM05D003613 ORTHO05D004055 4.1e-13 78.2 101 43.6
BcaC08g47524 Brassica carinata HOM05D003613 ORTHO05D004055 7.0e-13 77.4 103 44.7
BcaB03g14503 Brassica carinata HOM05D003613 ORTHO05D004055 9.2e-13 77.0 87 50.6
C08p44600 Brassica napus HOM05D003613 ORTHO05D004055 9.2e-13 77.0 87 50.6
BolC8t52006H Brassica oleracea HOM05D003613 ORTHO05D004055 9.2e-13 77.0 87 50.6
FvH4_6g28090 Fragaria vesca HOM05D008004 ORTHO05D011218 9.2e-13 77.0 66 59.1
AT1G79660 Arabidopsis thaliana HOM05D003613 ORTHO05D004055 1.2e-12 76.6 101 46.5
BcaB02g06598 Brassica carinata HOM05D003613 ORTHO05D004055 1.6e-12 76.3 102 46.1
CARHR016650 Cardamine hirsuta HOM05D003613 ORTHO05D004055 1.6e-12 76.3 101 48.5
Sp1g14410 Schrenkiella parvula HOM05D003613 ORTHO05D004055 2.0e-12 75.9 87 49.4
Thhalv10009201m.g Eutrema salsugineum HOM05D003613 ORTHO05D004055 2.7e-12 75.5 101 46.5
QL12p003368 Quercus lobata HOM05D003613 ORTHO05D004055 2.7e-12 75.5 98 51.0
BcaC08g47525 Brassica carinata HOM05D003613 ORTHO05D004055 3.5e-12 75.1 103 45.6
A07p44660 Brassica napus HOM05D003613 ORTHO05D004055 3.5e-12 75.1 103 45.6
BolC6t40365H Brassica oleracea HOM05D003613 ORTHO05D004055 3.5e-12 75.1 103 45.6
BraA07t31975Z Brassica rapa HOM05D003613 ORTHO05D004055 3.5e-12 75.1 103 45.6
A09p61000 Brassica napus HOM05D003613 ORTHO05D004055 4.6e-12 74.7 87 49.4
BraA09t41473Z Brassica rapa HOM05D003613 ORTHO05D004055 4.6e-12 74.7 87 49.4
CARHR073400 Cardamine hirsuta HOM05D003613 ORTHO05D004055 4.6e-12 74.7 99 49.5
TAR626G0045 Trochodendron aralioides HOM05D003147 ORTHO05D004055 4.6e-12 74.7 92 51.1
Aa31LG4G1310 Aethionema arabicum HOM05D003613 ORTHO05D004055 6.0e-12 74.3 90 50.0
BcaC07g38803 Brassica carinata HOM05D003613 ORTHO05D004055 1.0e-11 73.6 102 47.1
C08p17390 Brassica napus HOM05D003613 ORTHO05D004055 1.0e-11 73.6 102 47.1
BolC8t49365H Brassica oleracea HOM05D003613 ORTHO05D004055 1.0e-11 73.6 102 47.1
A06p12110 Brassica napus HOM05D003613 ORTHO05D004055 1.3e-11 73.2 102 45.1
BraA06t24380Z Brassica rapa HOM05D003613 ORTHO05D004055 1.3e-11 73.2 102 45.1
Ca_18450_v3 Cicer arietinum L. HOM05D003613 ORTHO05D004055 1.7e-11 72.8 72 50.0
Lj4g0025384 Lotus japonicus HOM05D003613 ORTHO05D004055 1.7e-11 72.8 75 48.0
SHI11349 Sapria himalayana HOM05D003613 ORTHO05D004055 1.7e-11 72.8 74 52.7
BolC5t30160H Brassica oleracea HOM05D003613 ORTHO05D004055 2.3e-11 72.4 101 44.6
A08p31400 Brassica napus HOM05D003613 ORTHO05D004055 3.0e-11 72.0 102 46.1
BraA08t35063Z Brassica rapa HOM05D003613 ORTHO05D004055 3.0e-11 72.0 102 46.1
ATR0068G040 Amborella trichopoda HOM05D003613 ORTHO05D004055 3.9e-11 71.6 99 43.4
AUR62018676 Chenopodium quinoa HOM05D003613 ORTHO05D004055 3.9e-11 71.6 94 42.6
SEGI_37804 Sequoiadendron giganteum HOM05D003613 ORTHO05D004055 5.0e-11 71.2 96 43.8
Zm00001eb177920 Zea mays HOM05D003613 ORTHO05D004055 5.0e-11 71.2 98 42.9
BcaC05g25604 Brassica carinata HOM05D003613 ORTHO05D004055 1.5e-10 69.7 101 43.6
C05p14290 Brassica napus HOM05D003613 ORTHO05D004055 1.5e-10 69.7 101 43.6
QL10p043081 Quercus lobata HOM05D003613 ORTHO05D004055 1.5e-10 69.7 98 50.0
EL10Ac5g12047 Beta vulgaris HOM05D003613 ORTHO05D004055 2.5e-10 68.9 93 44.1
BcaB03g13047 Brassica carinata HOM05D003613 ORTHO05D004055 5.6e-10 67.8 102 45.1
Zm00001eb412000 Zea mays HOM05D003613 ORTHO05D004055 5.6e-10 67.8 99 45.5
arahy.Tifrunner.gnm1.ann1.LI0G0T Arachis hypogaea HOM05D003613 ORTHO05D004055 7.3e-10 67.4 70 50.0
BcaC03g14996 Brassica carinata HOM05D003613 ORTHO05D004055 9.5e-10 67.0 84 48.8
C02p25300 Brassica napus HOM05D003613 ORTHO05D004055 9.5e-10 67.0 84 48.8
BolC2t08604H Brassica oleracea HOM05D003613 ORTHO05D004055 9.5e-10 67.0 84 48.8
Lalb_Chr09g0327111 Lupinus albus HOM05D003613 ORTHO05D004055 1.2e-09 66.6 90 43.3
CSS0016880 Camellia sinensis var. sinensis HOM05D003613 ORTHO05D004055 2.1e-09 65.9 59 61.0
Mapoly0033s0168 Marchantia polymorpha HOM05D000087 ORTHO05D255883 1.1e-08 63.5 82 41.5
Ah.12g055300 Amaranthus hybridus HOM05D003613 ORTHO05D004055 2.3e-08 62.4 95 40.0
BolC8t51544H Brassica oleracea HOM05D003613 ORTHO05D004055 3.1e-08 62.0 69 50.7
BcaC03g17203 Brassica carinata HOM05D003613 ORTHO05D004055 8.9e-08 60.5 69 50.7
BolC2t11219H Brassica oleracea HOM05D003613 ORTHO05D004055 8.9e-08 60.5 69 50.7
C08p39730 Brassica napus HOM05D003613 ORTHO05D004055 1.5e-07 59.7 69 47.8
AagrBONN_evm.TU.Sc2ySwM_368.2820 Anthoceros agrestis HOM05D003613 ORTHO05D004055 9.8e-07 57.0 55 49.1
Pp3c10_10840 Physcomitrium patens HOM05D003613 ORTHO05D004055 2.2e-06 55.8 78 41.0
SMO307G0037 Selaginella moellendorffii HOM05D000818 ORTHO05D004055 2.9e-06 55.5 68 39.7
SMO001G0027 Selaginella moellendorffii HOM05D003613 ORTHO05D004055 4.9e-06 54.7 52 46.2
Pp3c14_25540 Physcomitrium patens HOM05D003613 ORTHO05D004055 8.3e-06 53.9 65 43.1


User provided reference genes

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