Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 2.8e-219 765.0 386 100.0
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 5.9e-153 544.7 385 72.2
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 3.8e-152 542.0 377 72.9
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 7.2e-151 537.7 381 73.0
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 7.2e-151 537.7 343 78.4
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 7.2e-151 537.7 395 71.1
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 1.2e-150 537.0 391 70.8
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 2.1e-150 536.2 392 70.9
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 3.6e-150 535.4 387 70.8
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 7.9e-150 534.3 389 69.4
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 1.0e-149 533.9 358 74.0
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 1.4e-149 533.5 395 71.1
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 1.8e-149 533.1 388 70.4
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 2.3e-149 532.7 386 70.2
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 8.8e-149 530.8 394 68.3
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 8.8e-149 530.8 388 72.2
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 1.5e-148 530.0 391 68.8
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 1.5e-148 530.0 395 70.9
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 2.0e-148 529.6 314 81.2
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 4.4e-148 528.5 325 78.5
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 1.3e-147 526.9 397 67.8
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 2.2e-147 526.2 400 69.8
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 2.8e-147 525.8 385 69.4
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 3.7e-147 525.4 394 68.8
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 4.8e-147 525.0 381 70.1
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 8.2e-147 524.2 344 75.0
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 1.1e-146 523.9 386 69.9
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 1.8e-146 523.1 325 78.2
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 1.8e-146 523.1 388 69.1
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 1.8e-146 523.1 324 78.1
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 2.4e-146 522.7 387 69.3
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 3.1e-146 522.3 325 77.5
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 3.1e-146 522.3 372 70.4
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 4.1e-146 521.9 391 69.3
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 7.0e-146 521.2 392 70.2
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 1.2e-145 520.4 393 68.7
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 1.6e-145 520.0 389 68.9
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 2.0e-145 519.6 318 79.9
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 2.0e-145 519.6 394 69.8
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 2.0e-145 519.6 353 73.9
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 2.0e-145 519.6 396 68.2
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 3.5e-145 518.8 391 69.1
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 4.5e-145 518.5 315 79.0
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 5.9e-145 518.1 388 68.8
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 7.7e-145 517.7 384 69.8
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 7.7e-145 517.7 325 77.2
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 7.7e-145 517.7 334 75.4
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 1.7e-144 516.5 356 72.5
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 1.7e-144 516.5 387 69.3
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 2.2e-144 516.2 391 68.8
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 2.9e-144 515.8 370 70.3
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 3.8e-144 515.4 315 78.7
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 3.8e-144 515.4 342 74.0
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 3.8e-144 515.4 393 68.2
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 3.8e-144 515.4 367 69.2
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 2.5e-143 512.7 325 76.3
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 3.2e-143 512.3 339 74.0
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 3.2e-143 512.3 340 73.8
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 4.2e-143 511.9 343 73.5
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 5.5e-143 511.5 386 68.7
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 9.4e-143 510.8 339 73.7
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 3.6e-142 508.8 386 66.8
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 4.7e-142 508.4 349 73.1
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 1.8e-141 506.5 388 67.5
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 5.2e-141 505.0 386 67.9
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 1.5e-140 503.4 352 71.6
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 2.6e-140 502.7 386 66.8
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 3.3e-140 502.3 371 67.7
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 7.5e-140 501.1 387 68.7
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 1.7e-139 500.0 387 64.6
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 6.3e-139 498.0 385 66.0
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 1.4e-138 496.9 362 68.0
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 1.8e-138 496.5 350 70.0
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 2.7e-137 492.7 332 72.3
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 5.9e-137 491.5 327 72.5
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 1.3e-136 490.3 370 67.3
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 8.5e-136 487.6 387 63.0
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 7.2e-135 484.6 373 68.9
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 3.6e-134 482.3 382 64.7
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 4.7e-134 481.9 367 67.8
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 5.2e-133 478.4 357 67.2
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 4.5e-129 465.3 402 59.2
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 5.9e-129 464.9 276 81.2
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 1.1e-127 460.7 359 66.6
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 6.1e-126 454.9 276 79.0
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 9.8e-124 447.6 268 80.6
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 3.1e-122 442.6 267 77.9
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 5.9e-121 438.3 349 67.3
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 8.9e-117 424.5 261 78.9
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 1.2e-116 424.1 339 65.5
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 9.2e-114 414.5 317 68.8
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 2.5e-111 406.4 320 61.6
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 1.6e-110 403.7 315 61.0
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 1.6e-110 403.7 316 60.4
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 6.8e-109 398.3 268 69.0
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 1.6e-105 387.1 362 54.7
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 1.1e-101 374.4 326 61.0
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 2.3e-101 373.2 267 70.4
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 1.4e-98 364.0 290 63.8
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 1.2e-92 344.4 298 62.4
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.7e-91 340.5 297 64.0
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 8.7e-88 328.2 253 65.6
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 8.1e-78 295.0 267 62.9
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 8.7e-72 275.0 267 58.1
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 2.4e-69 266.9 317 40.4
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 2.4e-69 266.9 317 40.4
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 2.4e-69 266.9 332 42.8
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 5.8e-68 262.3 243 60.1
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 4.9e-67 259.2 311 44.4
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 2.3e-64 250.4 154 77.3
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 5.8e-60 235.7 224 57.1
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 8.4e-59 231.9 130 83.8
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 8.4e-59 231.9 165 70.9
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 1.1e-34 151.8 413 30.0
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-34 150.6 100 69.0
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 1.2e-33 148.3 90 80.0
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 4.1e-29 133.3 91 71.4
HanXRQChr04g0099751 Helianthus annuus HOM05D005969 ORTHO05D007407 5.3e-29 132.9 79 78.5
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.3e-27 128.3 73 76.7
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 7.0e-21 105.9 105 58.1
CBR_g50568 Chara braunii HOM05D000004 ORTHO05D000002 7.2e-18 95.9 78 57.7
Hma1.2p1_0109F.1_g052620 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 8.8e-16 89.0 54 77.8
BcaB04g17655 Brassica carinata HOM05D005969 ORTHO05D007407 1.2e-15 88.6 58 72.4
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 5.7e-15 86.3 73 61.6
Lj9C492T13 Lonicera japonica HOM05D005969 ORTHO05D007407 2.8e-14 84.0 118 47.5
Glyma.07G022602 Glycine max HOM05D005969 ORTHO05D007407 4.8e-14 83.2 58 81.0
HanXRQChr14g0426781 Helianthus annuus HOM05D005969 ORTHO05D007407 1.0e-11 75.5 47 74.5
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 2.5e-10 70.9 278 26.3
PGSC0003DMG400019818 Solanum tuberosum HOM05D005969 ORTHO05D007407 2.5e-10 70.9 95 45.3
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 2.8e-09 67.4 288 27.1
SEGI_03763 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 8.0e-09 65.9 121 38.8
SEGI_15560 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 8.0e-09 65.9 121 38.8
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 2.3e-08 64.3 283 27.2
Potri.003G182801 Populus trichocarpa HOM05D005969 ORTHO05D007407 2.3e-08 64.3 75 48.0
HanXRQChr04g0099771 Helianthus annuus HOM05D005969 ORTHO05D007407 3.0e-08 63.9 42 73.8
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 4.0e-08 63.5 282 26.6
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 4.0e-08 63.5 281 27.4
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 5.2e-08 63.2 280 28.6
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 5.2e-08 63.2 317 26.8
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 6.8e-08 62.8 281 26.3
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 6.8e-08 62.8 281 26.3
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 1.2e-07 62.0 266 27.8
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 1.2e-07 62.0 289 26.0
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 1.2e-07 62.0 313 25.2
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 1.2e-07 62.0 332 25.6
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 1.2e-07 62.0 276 26.8
TPR.G23080 Trifolium pratense HOM05D005969 ORTHO05D007407 1.5e-07 61.6 58 56.9
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 2.6e-07 60.8 286 28.0
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 2.6e-07 60.8 281 26.0
Psat6g223920 Pisum sativum HOM05D002710 ORTHO05D002905 2.6e-07 60.8 187 30.5
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 4.4e-07 60.1 327 27.2
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 4.4e-07 60.1 294 25.2
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 5.7e-07 59.7 281 25.6
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 5.7e-07 59.7 276 28.6
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 7.5e-07 59.3 280 25.7
arahy.Tifrunner.gnm1.ann1.GZLR9S Arachis hypogaea HOM05D005969 ORTHO05D007407 9.8e-07 58.9 33 75.8
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 9.8e-07 58.9 309 25.9
QL05p035860 Quercus lobata HOM05D005969 ORTHO05D007407 9.8e-07 58.9 112 42.0
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 1.7e-06 58.2 109 38.5
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 2.8e-06 57.4 303 25.1


User provided reference genes

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