Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021369 Daucus carota HOM05D007259 ORTHO05D009158 6.0e-76 287.3 136 100.0
CAN.G1932.2 Capsicum annuum HOM05D007259 ORTHO05D009158 8.4e-54 213.8 109 89.9
Dinv21412 Davidia involucrata HOM05D007259 ORTHO05D009158 1.4e-53 213.0 121 81.8
Eucgr.F03958 Eucalyptus grandis HOM05D007259 ORTHO05D009158 5.4e-53 211.1 122 78.7
Actinidia36875 Actinidia chinensis HOM05D007259 ORTHO05D009158 9.3e-53 210.3 107 87.9
Sopen06g025720 Solanum pennellii HOM05D007259 ORTHO05D009158 2.1e-52 209.1 109 88.1
Solyc06g068470.3 Solanum lycopersicum HOM05D007259 ORTHO05D009158 2.7e-52 208.8 109 87.2
GSVIVG01015956001 Vitis vinifera HOM05D007259 ORTHO05D009158 3.5e-52 208.4 109 87.2
CSS0004525 Camellia sinensis var. sinensis HOM05D007259 ORTHO05D009158 6.0e-52 207.6 107 86.0
ECA246G0776 Erigeron canadensis HOM05D007259 ORTHO05D009158 1.0e-51 206.8 109 85.3
Peaxi162Scf00207g00430 Petunia axillaris HOM05D007259 ORTHO05D009158 1.0e-51 206.8 109 84.4
Potri.001G044200 Populus trichocarpa HOM05D007259 ORTHO05D009158 1.0e-51 206.8 109 88.1
PGSC0003DMG400028490 Solanum tuberosum HOM05D007259 ORTHO05D009158 1.3e-51 206.5 109 86.2
Duzib235G0063 Durio zibethinus HOM05D007259 ORTHO05D009158 1.7e-51 206.1 109 88.1
PSO017G0751 Papaver somniferum HOM05D007259 ORTHO05D009158 1.7e-51 206.1 107 88.8
PSO170G4635 Papaver somniferum HOM05D007259 ORTHO05D009158 1.7e-51 206.1 107 88.8
PGR102G1952 Punica granatum HOM05D007259 ORTHO05D009158 1.7e-51 206.1 108 88.0
TWI75G0585 Tripterygium wilfordii HOM05D007259 ORTHO05D009158 1.7e-51 206.1 122 79.5
Rhsim08G0205600 Rhododendron simsii HOM05D007259 ORTHO05D009158 2.3e-51 205.7 107 86.0
MSTRG.4677 Avicennia marina HOM05D007259 ORTHO05D009158 3.9e-51 204.9 109 86.2
Lj5A81T88 Lonicera japonica HOM05D007259 ORTHO05D009158 3.9e-51 204.9 109 82.6
Medtr4g007090 Medicago truncatula HOM05D007259 ORTHO05D009158 3.9e-51 204.9 109 84.4
Medtr4g007095 Medicago truncatula HOM05D007259 ORTHO05D009158 5.1e-51 204.5 109 85.3
TPR.G23090 Trifolium pratense HOM05D007259 ORTHO05D009158 5.1e-51 204.5 109 86.2
Ciclev10026584m.g Citrus clementina HOM05D007259 ORTHO05D009158 6.6e-51 204.1 113 83.2
RcHm_v2.0_Chr2g0132951 Rosa chinensis HOM05D007259 ORTHO05D009158 6.6e-51 204.1 109 86.2
BcaC03g15926 Brassica carinata HOM05D007259 ORTHO05D009158 8.7e-51 203.8 109 86.2
BolC2t09700H Brassica oleracea HOM05D007259 ORTHO05D009158 8.7e-51 203.8 109 86.2
HanXRQChr05g0153761 Helianthus annuus HOM05D007259 ORTHO05D009158 8.7e-51 203.8 113 81.4
Sabra01G0030500 Salix brachista HOM05D007259 ORTHO05D009158 8.7e-51 203.8 109 87.2
C02p36870 Brassica napus HOM05D007259 ORTHO05D009158 1.9e-50 202.6 109 85.3
VMungo0331G0163 Vigna mungo HOM05D007259 ORTHO05D009158 1.9e-50 202.6 107 85.0
Lsat_1_v5_gn_5_8261 Lactuca sativa HOM05D007259 ORTHO05D009158 2.5e-50 202.2 109 83.5
Sp5g34900 Schrenkiella parvula HOM05D007259 ORTHO05D009158 2.5e-50 202.2 109 86.2
FvH4_6g28630 Fragaria vesca HOM05D007259 ORTHO05D009158 3.3e-50 201.8 109 84.4
FAN05G5272 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.3e-50 201.8 109 84.4
FAN14G4954 Fragaria x ananassa HOM05D007259 ORTHO05D009158 3.3e-50 201.8 109 84.4
Gohir.D06G118700 Gossypium hirsutum HOM05D007259 ORTHO05D009158 3.3e-50 201.8 113 83.2
Gorai.010G136500 Gossypium raimondii HOM05D007259 ORTHO05D009158 5.6e-50 201.1 113 83.2
A02p23100 Brassica napus HOM05D007259 ORTHO05D009158 7.3e-50 200.7 109 85.3
BraA02t07308Z Brassica rapa HOM05D007259 ORTHO05D009158 7.3e-50 200.7 109 85.3
QL05p036089 Quercus lobata HOM05D007259 ORTHO05D009158 7.3e-50 200.7 120 79.2
TPR.G23079 Trifolium pratense HOM05D007259 ORTHO05D009158 7.3e-50 200.7 108 84.3
Cc04_g05120 Coffea canephora HOM05D007259 ORTHO05D009158 9.6e-50 200.3 109 82.6
Atru.chr10.2413 Acer truncatum HOM05D007259 ORTHO05D009158 1.3e-49 199.9 109 83.5
BcaB05g25221 Brassica carinata HOM05D007259 ORTHO05D009158 1.3e-49 199.9 109 84.4
Carub.0002s2668 Capsella rubella HOM05D007259 ORTHO05D009158 1.3e-49 199.9 109 85.3
AT1G80860 Arabidopsis thaliana HOM05D007259 ORTHO05D009158 1.6e-49 199.5 109 86.2
BcaB05g25224 Brassica carinata HOM05D007259 ORTHO05D009158 1.6e-49 199.5 109 84.4
Thhalv10019243m.g Eutrema salsugineum HOM05D007259 ORTHO05D009158 1.6e-49 199.5 109 84.4
CANSAT56G1631 Cannabis sativa HOM05D007259 ORTHO05D009158 2.8e-49 198.7 109 85.3
Cfa001880 Carpinus fangiana HOM05D007259 ORTHO05D009158 2.8e-49 198.7 113 83.2
Hund00433 Selenicereus undatus HOM05D007259 ORTHO05D009158 3.6e-49 198.4 108 85.2
Thecc.06G041800 Theobroma cacao HOM05D007259 ORTHO05D009158 4.8e-49 198.0 128 75.0
EL10Ac9g22206 Beta vulgaris HOM05D007259 ORTHO05D009158 6.2e-49 197.6 110 84.5
SGA_v2.0_scaffold26G11300 Striga asiatica HOM05D007259 ORTHO05D009158 6.2e-49 197.6 107 82.2
Ah.01g006970 Amaranthus hybridus HOM05D007259 ORTHO05D009158 1.1e-48 196.8 106 84.9
Gohir.A06G114200 Gossypium hirsutum HOM05D007259 ORTHO05D009158 1.1e-48 196.8 113 80.5
Lj3g0012869 Lotus japonicus HOM05D007259 ORTHO05D009158 1.1e-48 196.8 107 84.1
Psat7g260280 Pisum sativum HOM05D007259 ORTHO05D009158 1.8e-48 196.1 124 75.0
Glyma.08G218900 Glycine max HOM05D007259 ORTHO05D009158 2.4e-48 195.7 106 82.1
Lalb_Chr01g0012071 Lupinus albus HOM05D007259 ORTHO05D009158 2.4e-48 195.7 107 83.2
Manes.04G102300 Manihot esculenta HOM05D007259 ORTHO05D009158 3.1e-48 195.3 126 76.2
Oeu060130.1 Olea europaea HOM05D007259 ORTHO05D009158 4.0e-48 194.9 109 82.6
ClCG10G012930 Citrullus lanatus HOM05D007259 ORTHO05D009158 6.9e-48 194.1 108 83.3
Nn8g39898 Nelumbo nucifera HOM05D007259 ORTHO05D009158 6.9e-48 194.1 109 80.7
AL2G40530 Arabidopsis lyrata HOM05D007259 ORTHO05D009158 9.0e-48 193.7 109 85.3
FAN09G1653 Fragaria x ananassa HOM05D007259 ORTHO05D009158 9.0e-48 193.7 109 82.6
CARHR073610 Cardamine hirsuta HOM05D007259 ORTHO05D009158 2.0e-47 192.6 116 80.2
Potri.003G182400 Populus trichocarpa HOM05D007259 ORTHO05D009158 2.0e-47 192.6 100 86.0
Aa31LG4G1140 Aethionema arabicum HOM05D007259 ORTHO05D009158 2.6e-47 192.2 108 81.5
CsaV3_3G032790 Cucumis sativus L. HOM05D007259 ORTHO05D009158 4.5e-47 191.4 108 83.3
Migut.D01126 Erythranthe guttata HOM05D007259 ORTHO05D009158 4.5e-47 191.4 107 81.3
SalBow6G4962 Salvia bowleyana HOM05D007259 ORTHO05D009158 4.5e-47 191.4 112 76.8
CiPaw.01G254600 Carya illinoinensis HOM05D007259 ORTHO05D009158 9.9e-47 190.3 109 85.3
Sed0006537 Sechium edule HOM05D007259 ORTHO05D009158 9.9e-47 190.3 108 83.3
Sc12g0008330 Simmondsia chinensis HOM05D007259 ORTHO05D009158 9.9e-47 190.3 105 78.1
THA.LOC104812409 Tarenaya hassleriana HOM05D007259 ORTHO05D009158 4.9e-46 188.0 109 80.7
Phvul.010G161400 Phaseolus vulgaris HOM05D007259 ORTHO05D009158 1.4e-45 186.4 107 79.4
Prupe.3G098300 Prunus persica HOM05D007259 ORTHO05D009158 2.4e-45 185.7 109 81.7
MBI15_g08512_MAGBIO Magnolia biondii HOM05D007259 ORTHO05D009158 3.9e-43 178.3 106 75.5
Nitab4.5_0008962g0030 Nicotiana tabacum HOM05D007259 ORTHO05D009158 1.1e-42 176.8 88 89.8
Os02g0612100 Oryza sativa ssp. japonica HOM05D007259 ORTHO05D009158 1.1e-40 170.2 109 73.4
unitig_60.g25615 Utricularia gibba HOM05D007259 ORTHO05D009158 9.9e-39 163.7 150 56.0
Zm00001eb184520 Zea mays HOM05D007259 ORTHO05D009158 9.9e-39 163.7 109 72.5
vmacro19057 Vaccinium macrocarpon HOM05D007259 ORTHO05D009158 9.3e-37 157.1 82 85.4
Glyma.07G022900 Glycine max HOM05D007259 ORTHO05D009158 2.7e-36 155.6 84 83.3
Haze_16667 Corylus avellana HOM05D007259 ORTHO05D009158 7.9e-36 154.1 206 45.1
AagrBONN_evm.TU.Sc2ySwM_117.1157 Anthoceros agrestis HOM05D007259 ORTHO05D009158 1.6e-33 146.4 109 61.5
MD17G1223400 Malus domestica HOM05D007259 ORTHO05D009158 2.1e-33 146.0 83 80.7
SMO141G0127 Selaginella moellendorffii HOM05D007259 ORTHO05D009158 3.7e-33 145.2 125 56.0
HPP92_010735 Vanilla planifolia HOM05D007259 ORTHO05D009158 3.7e-33 145.2 113 63.7
SEGI_39537 Sequoiadendron giganteum HOM05D007259 ORTHO05D009158 1.7e-30 136.3 97 62.9
ATR0739G058 Amborella trichopoda HOM05D007259 ORTHO05D009158 2.2e-30 136.0 87 72.4
CDE12G0386 Ceratophyllum demersum HOM05D007259 ORTHO05D009158 1.1e-29 133.7 77 79.2
Pp3c6_3720 Physcomitrium patens HOM05D007259 ORTHO05D009158 1.3e-27 126.7 102 61.8
HPP92_010738 Vanilla planifolia HOM05D007259 ORTHO05D009158 2.2e-22 109.4 81 66.7
SalBow8G2481 Salvia bowleyana HOM05D007259 ORTHO05D009158 1.3e-14 83.6 52 75.0
Aqoxy2G00331 Aquilegia oxysepala HOM05D001307 ORTHO05D001158 3.6e-12 75.5 35 94.3
Nitab4.5_0000886g0050 Nicotiana tabacum HOM05D007259 ORTHO05D009158 4.5e-07 58.5 35 71.4


User provided reference genes

Program Settings