Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 4.2e-184 647.9 326 100.0
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 1.9e-160 569.3 328 86.3
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 6.7e-158 560.8 327 85.3
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 6.7e-158 560.8 327 85.6
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.5e-157 558.9 327 85.3
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 6.5e-153 544.3 326 83.4
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 1.1e-152 543.5 326 83.4
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 2.5e-152 542.3 326 83.4
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 3.2e-152 542.0 330 83.0
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 7.2e-152 540.8 326 83.4
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 9.4e-152 540.4 327 82.3
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 9.4e-152 540.4 323 83.9
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 9.4e-152 540.4 326 82.2
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.6e-151 539.7 324 82.7
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 1.0e-150 537.0 326 82.5
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.8e-150 536.2 328 81.1
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 3.9e-150 535.0 327 82.6
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 3.9e-150 535.0 324 81.5
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 6.7e-150 534.3 326 81.3
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 6.7e-150 534.3 328 80.8
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 6.7e-150 534.3 331 79.5
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 1.5e-149 533.1 326 81.9
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 3.3e-149 531.9 326 81.0
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.4e-149 530.8 324 81.8
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 9.7e-149 530.4 330 79.1
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 2.2e-148 529.3 326 81.0
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 2.8e-148 528.9 326 80.7
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 2.8e-148 528.9 326 81.0
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 4.8e-148 528.1 330 79.7
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 6.3e-148 527.7 326 81.6
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 8.2e-148 527.3 326 81.3
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 8.2e-148 527.3 326 81.6
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 2.4e-147 525.8 327 82.0
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 1.2e-146 523.5 324 79.6
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 1.5e-146 523.1 326 78.8
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 2.6e-146 522.3 324 80.9
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 2.6e-146 522.3 326 80.1
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 7.7e-146 520.8 326 80.1
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 1.7e-145 519.6 326 79.8
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 5.0e-145 518.1 326 78.8
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 6.5e-145 517.7 326 79.4
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 8.5e-145 517.3 326 77.9
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 8.5e-145 517.3 328 80.2
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 1.9e-144 516.2 326 78.8
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 7.2e-144 514.2 326 78.5
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 2.7e-143 512.3 326 78.5
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 2.7e-143 512.3 326 78.5
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 2.7e-143 512.3 326 77.9
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 3.6e-143 511.9 326 78.8
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 4.7e-143 511.5 326 78.2
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 3.9e-142 508.4 326 78.2
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 8.8e-142 507.3 329 78.1
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 2.0e-141 506.1 326 78.2
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 2.2e-140 502.7 326 77.6
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 2.2e-140 502.7 326 77.6
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 2.8e-140 502.3 326 77.6
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 2.8e-140 502.3 328 77.7
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 4.8e-140 501.5 326 77.0
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 6.3e-140 501.1 326 77.3
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 1.4e-139 500.0 326 76.7
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.8e-139 499.6 323 76.8
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 4.1e-139 498.4 326 76.1
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 4.1e-139 498.4 326 76.1
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 5.3e-139 498.0 326 76.7
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 7.7e-138 494.2 326 76.4
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 1.0e-137 493.8 326 76.4
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.7e-137 493.0 324 77.8
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 3.8e-137 491.9 326 76.7
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 6.5e-137 491.1 326 73.9
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 1.1e-136 490.3 326 76.4
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 1.1e-136 490.3 326 76.4
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 2.5e-136 489.2 326 74.8
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 3.6e-135 485.3 326 73.6
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 4.7e-135 485.0 326 74.2
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 6.1e-135 484.6 326 73.6
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 6.1e-135 484.6 305 78.4
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 8.0e-135 484.2 326 73.3
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.8e-134 483.0 326 74.5
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 1.2e-133 480.3 326 73.6
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.1e-131 472.2 324 75.3
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 7.0e-131 471.1 326 72.1
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.2e-129 466.1 304 78.9
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.2e-127 460.3 304 77.3
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 6.8e-126 454.5 324 70.1
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 8.8e-126 454.1 326 69.6
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 3.7e-124 448.7 323 67.5
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.8e-124 448.4 311 75.9
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 3.1e-123 445.7 301 72.4
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 1.6e-122 443.4 326 69.0
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 2.0e-122 443.0 326 68.1
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 2.6e-117 426.0 331 62.5
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 3.1e-115 419.1 325 62.5
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 2.0e-114 416.4 263 80.2
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 5.0e-113 411.8 327 64.5
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 2.6e-109 399.4 329 63.2
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 4.9e-108 395.2 274 74.5
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 7.0e-107 391.3 318 62.9
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 9.2e-107 391.0 325 61.2
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 2.3e-105 386.3 321 58.3
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 3.6e-103 379.0 262 76.7
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 6.8e-102 374.8 333 55.9
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 5.8e-101 371.7 323 55.7
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 1.4e-99 367.1 214 86.9
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 3.5e-98 362.5 256 74.2
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 6.6e-97 358.2 300 61.3
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 9.5e-96 354.4 322 53.1
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 5.2e-94 348.6 326 54.6
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.4e-91 340.5 311 61.1
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 8.6e-89 331.3 327 50.8
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.6e-87 327.0 291 60.5
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 8.4e-84 314.7 291 56.7
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 5.2e-78 295.4 220 67.7
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 7.1e-67 258.5 303 50.8
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 1.2e-45 188.0 128 72.7
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 3.3e-40 169.9 120 68.3
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.9e-36 156.8 108 69.4
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 3.8e-36 156.4 278 36.3
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.1e-30 138.3 122 60.7
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 4.1e-30 136.3 134 51.5
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 7.0e-30 135.6 118 56.8
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.6e-29 133.7 108 63.9
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 1.7e-28 131.0 359 29.0
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 3.3e-24 116.7 62 85.5
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 9.1e-22 108.6 335 27.5
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 4.5e-21 106.3 72 72.2
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 6.3e-15 85.9 62 64.5


User provided reference genes

Program Settings