Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 6.0e-155 550.8 280 100.0
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 1.1e-111 407.1 247 75.3
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 2.7e-107 392.5 247 72.1
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 3.5e-107 392.1 280 66.8
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 3.5e-107 392.1 280 66.4
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 4.6e-107 391.7 286 67.5
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 2.3e-106 389.4 260 70.0
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 5.1e-106 388.3 266 68.8
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 8.7e-106 387.5 287 66.6
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.9e-105 386.3 279 67.4
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 1.9e-105 386.3 282 66.7
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 7.4e-105 384.4 286 64.7
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 1.6e-104 383.3 274 67.2
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 1.6e-104 383.3 286 66.8
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 2.1e-104 382.9 273 66.3
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 8.2e-104 380.9 249 70.3
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 1.4e-103 380.2 282 64.2
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 2.4e-103 379.4 285 64.9
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 4.0e-103 378.6 260 67.3
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 6.9e-103 377.9 249 69.5
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 6.9e-103 377.9 282 64.9
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 9.0e-103 377.5 263 67.7
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.2e-102 377.1 274 65.3
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 1.2e-102 377.1 212 79.7
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 1.2e-102 377.1 273 63.7
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.5e-102 376.7 283 66.1
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 2.0e-102 376.3 285 64.6
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 2.0e-102 376.3 211 79.1
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.0e-102 376.3 212 78.3
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 2.6e-102 375.9 266 68.8
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 2.6e-102 375.9 210 78.6
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 3.4e-102 375.6 212 79.2
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 3.4e-102 375.6 313 62.3
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 4.5e-102 375.2 222 76.1
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 4.5e-102 375.2 275 65.8
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 4.5e-102 375.2 286 62.6
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 4.5e-102 375.2 284 64.4
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 7.6e-102 374.4 267 66.7
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 1.3e-101 373.6 212 77.8
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 1.3e-101 373.6 286 63.3
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 1.7e-101 373.2 267 66.7
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.9e-101 371.7 205 78.0
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 4.9e-101 371.7 205 78.0
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 8.4e-101 370.9 279 65.2
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 1.1e-100 370.5 213 76.5
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 1.1e-100 370.5 213 76.5
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 1.1e-100 370.5 213 76.5
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 1.1e-100 370.5 213 76.5
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 1.1e-100 370.5 213 76.5
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.1e-100 370.5 286 63.6
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 1.1e-100 370.5 277 63.9
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.4e-100 370.2 205 77.6
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 1.9e-100 369.8 286 62.9
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 3.2e-100 369.0 205 78.0
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 3.2e-100 369.0 278 63.7
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 5.5e-100 368.2 288 62.5
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 7.1e-100 367.9 212 75.9
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 9.3e-100 367.5 279 63.1
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 1.2e-99 367.1 207 80.2
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 1.2e-99 367.1 285 62.5
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 1.6e-99 366.7 282 64.5
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 1.6e-99 366.7 212 76.9
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.6e-99 366.7 275 62.2
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 2.1e-99 366.3 213 75.1
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 2.1e-99 366.3 280 63.6
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 2.1e-99 366.3 213 75.1
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 4.6e-99 365.2 282 62.1
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 4.6e-99 365.2 214 76.2
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 6.1e-99 364.8 277 64.3
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 7.9e-99 364.4 213 75.6
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 7.9e-99 364.4 278 62.2
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 1.0e-98 364.0 286 61.9
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.3e-98 363.6 213 75.6
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 1.8e-98 363.2 213 75.1
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 1.8e-98 363.2 282 63.8
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 2.3e-98 362.8 248 66.9
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 2.3e-98 362.8 274 63.5
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 2.3e-98 362.8 278 61.9
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 2.3e-98 362.8 212 75.9
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 5.1e-98 361.7 278 62.6
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 8.7e-98 360.9 205 76.1
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 8.7e-98 360.9 212 74.5
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 1.5e-97 360.1 275 62.5
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 2.5e-97 359.4 295 62.0
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 3.3e-97 359.0 213 73.7
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 5.7e-97 358.2 282 61.3
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 5.7e-97 358.2 207 76.8
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.6e-96 356.7 269 63.6
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 2.2e-96 356.3 274 62.4
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 2.2e-96 356.3 282 64.2
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 1.1e-95 354.0 207 74.4
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 2.4e-95 352.8 282 61.0
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 4.1e-95 352.1 192 78.6
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 5.3e-95 351.7 282 59.6
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 1.5e-94 350.1 292 59.2
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 2.0e-94 349.7 275 61.1
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 7.7e-94 347.8 264 63.3
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 1.7e-93 346.7 307 56.0
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.8e-90 336.7 223 68.6
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 2.0e-89 333.2 205 73.7
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 2.8e-88 329.3 211 69.7
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 1.8e-87 326.6 205 72.2
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.5e-86 323.6 293 57.7
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 1.6e-83 313.5 281 58.4
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 2.6e-78 296.2 280 49.6
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.3e-73 279.3 208 57.7
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 6.3e-72 275.0 205 57.6
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 5.3e-71 271.9 206 57.8
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 4.5e-70 268.9 211 63.0
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 1.7e-69 266.9 205 56.1
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 6.8e-66 255.0 209 52.2
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 2.6e-65 253.1 188 61.7
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 1.7e-64 250.4 135 78.5
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 3.5e-62 242.7 146 74.0
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 5.5e-60 235.3 172 62.2
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 2.2e-56 223.4 186 53.2
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 1.8e-55 220.3 135 65.2
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 1.9e-44 183.7 97 79.4
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 1.4e-42 177.6 290 39.3
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 8.9e-42 174.9 103 73.8
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 6.6e-29 132.1 143 47.6
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 6.2e-27 125.6 150 46.7
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 1.3e-21 107.8 60 73.3
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.4e-15 87.8 55 69.1
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 6.9e-10 68.9 37 81.1


User provided reference genes

Program Settings