Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021309 Daucus carota HOM05D003750 ORTHO05D004337 8.2e-123 444.1 293 100.0
DCAR_009794 Daucus carota HOM05D003750 ORTHO05D004337 7.5e-68 261.5 392 55.6
vmacro12451 Vaccinium macrocarpon HOM05D003750 ORTHO05D004337 1.0e-48 198.0 302 54.3
Prupe.3G171000 Prunus persica HOM05D003750 ORTHO05D004337 1.5e-47 194.1 316 55.4
Peaxi162Scf00688g00432 Petunia axillaris HOM05D003750 ORTHO05D004337 3.5e-41 172.9 321 47.4
Potri.002G060800 Populus trichocarpa HOM05D003750 ORTHO05D004337 4.6e-41 172.6 322 42.2
MD09G1154000 Malus domestica HOM05D003750 ORTHO05D004337 1.3e-40 171.0 315 48.6
MD17G1140600 Malus domestica HOM05D003750 ORTHO05D004337 8.7e-40 168.3 304 48.4
Nitab4.5_0013539g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 8.7e-40 168.3 308 47.7
Nitab4.5_0001675g0060 Nicotiana tabacum HOM05D003750 ORTHO05D004337 7.4e-39 165.2 299 48.5
Rhsim06G0118400 Rhododendron simsii HOM05D003750 ORTHO05D004337 7.4e-39 165.2 265 52.8
FAN05G3098 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.6e-38 164.1 315 51.4
FvH4_6g38100 Fragaria vesca HOM05D003750 ORTHO05D004337 2.1e-38 163.7 313 52.7
TWI14G1010 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 2.8e-38 163.3 289 49.8
CAN.G585.54 Capsicum annuum HOM05D003750 ORTHO05D004337 4.8e-38 162.5 312 43.3
FAN14G5523 Fragaria x ananassa HOM05D003750 ORTHO05D004337 4.8e-38 162.5 312 52.9
Peaxi162Scf00807g00024 Petunia axillaris HOM05D003750 ORTHO05D004337 8.1e-38 161.8 346 48.8
COL.COLO4_33737 Corchorus olitorius HOM05D003750 ORTHO05D004337 1.8e-37 160.6 350 49.4
TWI59G1023 Tripterygium wilfordii HOM05D003750 ORTHO05D004337 2.4e-37 160.2 293 52.2
Duzib264G0293 Durio zibethinus HOM05D003750 ORTHO05D004337 3.1e-37 159.8 308 54.9
DCAR_016898 Daucus carota HOM05D003750 ORTHO05D004337 9.0e-37 158.3 120 66.7
SGA_v2.0_scaffold70G23672 Striga asiatica HOM05D003750 ORTHO05D004337 1.5e-36 157.5 316 39.2
Actinidia11198 Actinidia chinensis HOM05D003750 ORTHO05D004337 2.6e-36 156.8 314 43.3
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 1.0e-35 154.8 301 45.8
Duzib187G0136 Durio zibethinus HOM05D003750 ORTHO05D004337 2.2e-35 153.7 314 51.0
Cc05_g09310 Coffea canephora HOM05D003750 ORTHO05D004337 2.9e-35 153.3 332 40.1
Migut.M00516 Erythranthe guttata HOM05D003750 ORTHO05D004337 3.8e-35 152.9 122 64.8
Glyma.18G106400 Glycine max HOM05D003750 ORTHO05D004337 4.9e-35 152.5 287 45.3
Potri.005G200900 Populus trichocarpa HOM05D003750 ORTHO05D004337 6.5e-35 152.1 344 39.8
TAR626G1101 Trochodendron aralioides HOM05D003750 ORTHO05D004337 6.5e-35 152.1 306 51.0
Oeu020066.1 Olea europaea HOM05D003750 ORTHO05D004337 1.9e-34 150.6 127 62.2
Nitab4.5_0006934g0020 Nicotiana tabacum HOM05D003750 ORTHO05D004337 3.2e-34 149.8 127 61.4
Phvul.006G033900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 4.2e-34 149.4 290 49.7
Solyc07g055950.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 4.2e-34 149.4 294 45.9
RcHm_v2.0_Chr2g0151161 Rosa chinensis HOM05D003750 ORTHO05D004337 7.1e-34 148.7 299 54.8
VMungo0540G2251 Vigna mungo HOM05D003750 ORTHO05D004337 7.1e-34 148.7 303 40.9
unitig_747.g21612 Utricularia gibba HOM05D003750 ORTHO05D004337 9.3e-34 148.3 299 45.2
Sopen07g029310 Solanum pennellii HOM05D003750 ORTHO05D004337 1.2e-33 147.9 291 45.4
ClCG09G022350 Citrullus lanatus HOM05D003750 ORTHO05D004337 1.6e-33 147.5 125 64.0
SalBow7G0202 Salvia bowleyana HOM05D003750 ORTHO05D004337 1.6e-33 147.5 129 60.5
Duzib147G0801 Durio zibethinus HOM05D003750 ORTHO05D004337 2.1e-33 147.1 313 52.7
CSS0030446 Camellia sinensis var. sinensis HOM05D003750 ORTHO05D004337 2.7e-33 146.7 265 49.8
Gohir.D04G037100 Gossypium hirsutum HOM05D003750 ORTHO05D004337 2.7e-33 146.7 318 49.4
ClCG02G018380 Citrullus lanatus HOM05D003750 ORTHO05D004337 6.0e-33 145.6 297 42.8
Haze_13489 Corylus avellana HOM05D003750 ORTHO05D004337 1.0e-32 144.8 340 46.2
Lsat_1_v5_gn_3_35901 Lactuca sativa HOM05D003750 ORTHO05D004337 1.3e-32 144.4 354 42.4
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 1.8e-32 144.1 297 44.1
Glyma.02G287400 Glycine max HOM05D003750 ORTHO05D004337 2.3e-32 143.7 125 62.4
Glyma.14G027551 Glycine max HOM05D003750 ORTHO05D004337 2.3e-32 143.7 122 63.1
Migut.H02092 Erythranthe guttata HOM05D003750 ORTHO05D004337 3.9e-32 142.9 120 59.2
Gorai.012G041900 Gossypium raimondii HOM05D003750 ORTHO05D004337 3.9e-32 142.9 318 48.7
Lalb_Chr20g0108881 Lupinus albus HOM05D003750 ORTHO05D004337 3.9e-32 142.9 292 48.6
PGR142G2515 Punica granatum HOM05D003750 ORTHO05D004337 5.1e-32 142.5 298 49.0
Cpa.g.sc50.77 Carica papaya HOM05D003750 ORTHO05D004337 6.7e-32 142.1 130 60.8
Psat2g014640 Pisum sativum HOM05D003750 ORTHO05D004337 6.7e-32 142.1 125 60.0
Thhalv10016927m.g Eutrema salsugineum HOM05D003750 ORTHO05D004337 1.1e-31 141.4 123 62.6
Lalb_Chr04g0248731 Lupinus albus HOM05D003750 ORTHO05D004337 1.1e-31 141.4 124 61.3
Sabra02G0049300 Salix brachista HOM05D003750 ORTHO05D004337 1.1e-31 141.4 303 44.9
CiPaw.03G189300 Carya illinoinensis HOM05D003750 ORTHO05D004337 1.5e-31 141.0 299 45.2
CsaV3_6G038000 Cucumis sativus L. HOM05D003750 ORTHO05D004337 1.5e-31 141.0 116 62.9
AT2G42840 Arabidopsis thaliana HOM05D003750 ORTHO05D004337 1.9e-31 140.6 125 62.4
Ciclev10032169m.g Citrus clementina HOM05D003750 ORTHO05D004337 1.9e-31 140.6 321 52.0
Gohir.A05G378400 Gossypium hirsutum HOM05D003750 ORTHO05D004337 1.9e-31 140.6 324 50.0
Nitab4.5_0002027g0180 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.9e-31 140.6 427 31.4
Oeu040027.1 Olea europaea HOM05D003750 ORTHO05D004337 1.9e-31 140.6 334 41.6
Cfa022914 Carpinus fangiana HOM05D003750 ORTHO05D004337 2.5e-31 140.2 325 46.8
Dinv12695 Davidia involucrata HOM05D003750 ORTHO05D004337 2.5e-31 140.2 114 65.8
Psat0s4925g0080 Pisum sativum HOM05D003750 ORTHO05D004337 2.5e-31 140.2 297 47.5
BcaC02g07218 Brassica carinata HOM05D003750 ORTHO05D004337 3.3e-31 139.8 125 60.8
A04p32410 Brassica napus HOM05D003750 ORTHO05D004337 3.3e-31 139.8 125 60.8
C04p69930 Brassica napus HOM05D003750 ORTHO05D004337 3.3e-31 139.8 125 60.8
BolC4t28493H Brassica oleracea HOM05D003750 ORTHO05D004337 3.3e-31 139.8 125 60.8
BraA04t18694Z Brassica rapa HOM05D003750 ORTHO05D004337 3.3e-31 139.8 125 60.8
VMungo0647G1422 Vigna mungo HOM05D003750 ORTHO05D004337 3.3e-31 139.8 125 60.8
AL4G41450 Arabidopsis lyrata HOM05D003750 ORTHO05D004337 4.3e-31 139.4 125 61.6
Manes.01G128300 Manihot esculenta HOM05D003750 ORTHO05D004337 4.3e-31 139.4 314 48.4
Sc15g0002430 Simmondsia chinensis HOM05D003750 ORTHO05D004337 4.3e-31 139.4 122 57.4
BcaB06g29267 Brassica carinata HOM05D003750 ORTHO05D004337 5.7e-31 139.0 125 60.8
Nitab4.5_0001402g0030 Nicotiana tabacum HOM05D003750 ORTHO05D004337 5.7e-31 139.0 125 59.2
Ca_27365_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 7.4e-31 138.7 127 57.5
Lj6g0002200 Lotus japonicus HOM05D003750 ORTHO05D004337 7.4e-31 138.7 114 61.4
Sed0014259 Sechium edule HOM05D003750 ORTHO05D004337 7.4e-31 138.7 288 51.7
Sed0024619 Sechium edule HOM05D003750 ORTHO05D004337 7.4e-31 138.7 125 59.2
MSTRG.15053 Avicennia marina HOM05D003750 ORTHO05D004337 9.6e-31 138.3 315 48.3
BcaNung06740 Brassica carinata HOM05D003750 ORTHO05D004337 9.6e-31 138.3 123 60.2
A05p03190 Brassica napus HOM05D003750 ORTHO05D004337 9.6e-31 138.3 123 60.2
C04p03840 Brassica napus HOM05D003750 ORTHO05D004337 9.6e-31 138.3 123 60.2
BolC4t22020H Brassica oleracea HOM05D003750 ORTHO05D004337 9.6e-31 138.3 123 60.2
BraA05t19309Z Brassica rapa HOM05D003750 ORTHO05D004337 9.6e-31 138.3 123 60.2
Phvul.008G190900 Phaseolus vulgaris HOM05D003750 ORTHO05D004337 9.6e-31 138.3 125 60.0
FAN02G2641 Fragaria x ananassa HOM05D003750 ORTHO05D004337 1.3e-30 137.9 322 50.9
arahy.Tifrunner.gnm1.ann1.Y7JGW6 Arachis hypogaea HOM05D003750 ORTHO05D004337 1.6e-30 137.5 132 56.1
Glyma.08G309700 Glycine max HOM05D003750 ORTHO05D004337 1.6e-30 137.5 297 42.1
Nitab4.5_0000446g0080 Nicotiana tabacum HOM05D003750 ORTHO05D004337 1.6e-30 137.5 316 46.8
TPR.G12519 Trifolium pratense HOM05D003750 ORTHO05D004337 1.6e-30 137.5 125 58.4
Lalb_Chr19g0137861 Lupinus albus HOM05D003750 ORTHO05D004337 2.1e-30 137.1 280 49.3
Sp4g24960 Schrenkiella parvula HOM05D003750 ORTHO05D004337 2.1e-30 137.1 220 53.6
PGSC0003DMG400021281 Solanum tuberosum HOM05D003750 ORTHO05D004337 2.1e-30 137.1 123 57.7
arahy.Tifrunner.gnm1.ann1.UWZ29M Arachis hypogaea HOM05D003750 ORTHO05D004337 2.8e-30 136.7 132 56.1
Lalb_Chr17g0348311 Lupinus albus HOM05D003750 ORTHO05D004337 2.8e-30 136.7 125 59.2
Atru.chr6.1510 Acer truncatum HOM05D003750 ORTHO05D004337 4.8e-30 136.0 121 60.3
LjContig00310g0001182 Lotus japonicus HOM05D003750 ORTHO05D004337 4.8e-30 136.0 127 58.3
CANSAT64G2056 Cannabis sativa HOM05D003750 ORTHO05D004337 6.2e-30 135.6 116 60.3
MBI07_g30204_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 6.2e-30 135.6 129 61.2
Nn6g34390 Nelumbo nucifera HOM05D003750 ORTHO05D004337 8.2e-30 135.2 295 42.4
CARHR137920 Cardamine hirsuta HOM05D003750 ORTHO05D004337 1.1e-29 134.8 313 49.8
PGSC0003DMG400017342 Solanum tuberosum HOM05D003750 ORTHO05D004337 1.1e-29 134.8 293 45.1
Lalb_Chr10g0106741 Lupinus albus HOM05D003750 ORTHO05D004337 1.8e-29 134.0 123 58.5
Solyc10g007800.3 Solanum lycopersicum HOM05D003750 ORTHO05D004337 1.8e-29 134.0 126 57.9
Sopen10g003700 Solanum pennellii HOM05D003750 ORTHO05D004337 2.4e-29 133.7 125 56.8
Solyc12g011010.2 Solanum lycopersicum HOM05D003750 ORTHO05D004337 3.1e-29 133.3 121 57.9
PGSC0003DMG400007796 Solanum tuberosum HOM05D003750 ORTHO05D004337 6.9e-29 132.1 121 57.0
Carub.0004s2528 Capsella rubella HOM05D003750 ORTHO05D004337 1.2e-28 131.3 324 44.4
THA.LOC104803179 Tarenaya hassleriana HOM05D003750 ORTHO05D004337 1.5e-28 131.0 321 44.2
Thecc.01G160900 Theobroma cacao HOM05D003750 ORTHO05D004337 2.0e-28 130.6 309 54.4
MSTRG.6755 Avicennia marina HOM05D003750 ORTHO05D004337 2.6e-28 130.2 119 59.7
ECA246G0286 Erigeron canadensis HOM05D003750 ORTHO05D004337 2.6e-28 130.2 264 40.2
arahy.Tifrunner.gnm1.ann1.N94NTJ Arachis hypogaea HOM05D003750 ORTHO05D004337 4.5e-28 129.4 114 60.5
Eucgr.A01963 Eucalyptus grandis HOM05D003750 ORTHO05D004337 4.5e-28 129.4 129 61.2
Sopen12g006370 Solanum pennellii HOM05D003750 ORTHO05D004337 5.8e-28 129.0 122 58.2
unitig_899.g15337 Utricularia gibba HOM05D003750 ORTHO05D004337 5.8e-28 129.0 115 57.4
TAR624G1252 Trochodendron aralioides HOM05D002606 ORTHO05D003016 1.0e-27 128.3 123 56.9
HanXRQChr06g0171371 Helianthus annuus HOM05D003750 ORTHO05D004337 2.2e-27 127.1 347 40.9
Os01g0726700 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 2.2e-27 127.1 126 54.0
CAN.G1191.4 Capsicum annuum HOM05D003750 ORTHO05D004337 2.9e-27 126.7 118 58.5
SalBow7G1469 Salvia bowleyana HOM05D003750 ORTHO05D004337 3.8e-27 126.3 122 54.9
unitig_62.g23108 Utricularia gibba HOM05D003750 ORTHO05D004337 3.8e-27 126.3 120 55.0
arahy.Tifrunner.gnm1.ann1.ZP8MLZ Arachis hypogaea HOM05D003750 ORTHO05D004337 1.4e-26 124.4 218 51.4
PSO675G0845 Papaver somniferum HOM05D003750 ORTHO05D004337 1.4e-26 124.4 129 51.9
QL08p043924 Quercus lobata HOM05D003750 ORTHO05D004337 1.4e-26 124.4 313 48.6
Eucgr.K01198 Eucalyptus grandis HOM05D003750 ORTHO05D004337 1.9e-26 124.0 328 43.3
MBI06_g20684_MAGBIO Magnolia biondii HOM05D003750 ORTHO05D004337 2.5e-26 123.6 129 54.3
PSO541G0678 Papaver somniferum HOM05D003750 ORTHO05D004337 2.5e-26 123.6 129 51.9
unitig_37.g12854 Utricularia gibba HOM05D003750 ORTHO05D004337 2.5e-26 123.6 273 42.5
unitig_46.g18277 Utricularia gibba HOM05D003750 ORTHO05D004337 2.5e-26 123.6 293 38.6
MELO3C014462.2 Cucumis melo HOM05D003750 ORTHO05D004337 3.2e-26 123.2 116 57.8
Hund08216 Selenicereus undatus HOM05D003750 ORTHO05D004337 3.2e-26 123.2 326 42.6
Sabra05G0152900 Salix brachista HOM05D003750 ORTHO05D004337 1.6e-25 120.9 312 47.4
Aqoxy4G00176 Aquilegia oxysepala HOM05D003750 ORTHO05D004337 2.1e-25 120.6 330 49.4
Lsat_1_v5_gn_4_26620 Lactuca sativa HOM05D003750 ORTHO05D004337 2.1e-25 120.6 131 51.9
Nn3g20965 Nelumbo nucifera HOM05D003750 ORTHO05D004337 2.1e-25 120.6 290 43.8
TPR.G16759 Trifolium pratense HOM05D003750 ORTHO05D004337 4.6e-25 119.4 112 58.0
AUR62015148 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.8e-24 117.5 116 51.7
Medtr3g089570 Medicago truncatula HOM05D003750 ORTHO05D004337 2.3e-24 117.1 299 47.2
Sed0013297 Sechium edule HOM05D003750 ORTHO05D004337 6.7e-24 115.5 292 39.7
CAN.G164.22 Capsicum annuum HOM05D003750 ORTHO05D004337 1.1e-23 114.8 277 40.4
Peaxi162Scf00035g00302 Petunia axillaris HOM05D003750 ORTHO05D004337 1.1e-23 114.8 396 39.1
Zm00001eb154370 Zea mays HOM05D003750 ORTHO05D004337 1.5e-23 114.4 124 54.0
Ah.01g013400 Amaranthus hybridus HOM05D003750 ORTHO05D004337 2.5e-23 113.6 115 51.3
CDE09G1130 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 2.5e-23 113.6 126 51.6
HanXRQChr17g0565481 Helianthus annuus HOM05D003750 ORTHO05D004337 7.4e-23 112.1 116 53.4
ATR0737G120 Amborella trichopoda HOM05D003750 ORTHO05D004337 1.3e-22 111.3 116 50.9
Ah.01g001950 Amaranthus hybridus HOM05D003750 ORTHO05D004337 2.2e-22 110.5 115 49.6
HanXRQChr17g0565411 Helianthus annuus HOM05D003750 ORTHO05D004337 3.7e-22 109.8 115 53.0
HanXRQChr17g0565191 Helianthus annuus HOM05D003750 ORTHO05D004337 4.8e-22 109.4 115 53.0
HanXRQChr17g0565441 Helianthus annuus HOM05D003750 ORTHO05D004337 4.8e-22 109.4 115 53.0
HanXRQChr17g0565471 Helianthus annuus HOM05D003750 ORTHO05D004337 4.8e-22 109.4 115 53.0
Aa31LG1G24600 Aethionema arabicum HOM05D003750 ORTHO05D004337 6.3e-22 109.0 330 46.1
Glyma.02G280550 Glycine max HOM05D003750 ORTHO05D004337 1.4e-21 107.8 124 52.4
HanXRQChr01g0028591 Helianthus annuus HOM05D003750 ORTHO05D004337 1.8e-21 107.5 112 53.6
Ca_06287_v3 Cicer arietinum L. HOM05D003750 ORTHO05D004337 4.1e-21 106.3 96 61.5
unitig_85.g27387 Utricularia gibba HOM05D003750 ORTHO05D004337 3.4e-20 103.2 106 55.7
HPP92_009096 Vanilla planifolia HOM05D003750 ORTHO05D004337 2.9e-19 100.1 113 50.4
CDE02G2915 Ceratophyllum demersum HOM05D003750 ORTHO05D004337 8.5e-19 98.6 116 46.6
EL10Ac9g22858 Beta vulgaris HOM05D003750 ORTHO05D004337 1.1e-18 98.2 299 43.1
ECA234G0795 Erigeron canadensis HOM05D001021 ORTHO05D000894 2.1e-17 94.0 102 51.0
Zm00001eb239390 Zea mays HOM05D003750 ORTHO05D004337 7.9e-17 92.0 113 48.7
AUR62017604 Chenopodium quinoa HOM05D003750 ORTHO05D004337 1.8e-16 90.9 95 48.4
SEGI_25228 Sequoiadendron giganteum HOM05D003750 ORTHO05D004337 1.8e-13 80.9 110 41.8
Zm00001eb278420 Zea mays HOM05D003750 ORTHO05D004337 1.8e-13 80.9 130 40.8
Zm00001eb120700 Zea mays HOM05D003750 ORTHO05D004337 3.1e-13 80.1 116 40.5
Os02g0230300 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 3.4e-12 76.6 66 60.6
Zm00001eb384740 Zea mays HOM05D003750 ORTHO05D004337 1.7e-11 74.3 107 45.8
Zm00001eb277660 Zea mays HOM05D003750 ORTHO05D004337 3.8e-11 73.2 110 42.7
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.8e-08 64.3 130 33.8
Os06g0553200 Oryza sativa ssp. japonica HOM05D003750 ORTHO05D004337 6.7e-08 62.4 110 40.0
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 4.4e-07 59.7 109 38.5


User provided reference genes

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