Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 7.9e-205 716.8 354 100.0
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.4e-140 503.4 348 70.1
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.1e-137 493.8 358 66.2
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.2e-136 490.3 362 65.5
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 7.8e-136 487.6 345 68.1
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 7.8e-136 487.6 345 68.1
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 1.1e-134 483.8 336 69.0
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 3.3e-134 482.3 333 67.9
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 9.6e-134 480.7 378 63.2
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 2.8e-133 479.2 353 64.9
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 1.8e-132 476.5 356 65.4
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 3.1e-132 475.7 352 65.1
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 5.2e-132 474.9 352 65.3
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 1.5e-131 473.4 352 64.8
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 1.7e-130 469.9 335 65.7
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 1.7e-130 469.9 333 67.6
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 3.8e-130 468.8 345 64.9
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 4.9e-130 468.4 355 63.4
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 6.4e-130 468.0 350 65.4
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 8.4e-130 467.6 332 66.6
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.1e-129 467.2 329 68.4
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 1.9e-129 466.5 347 63.7
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.9e-129 466.5 351 64.4
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 9.3e-129 464.2 348 64.4
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 2.1e-128 463.0 327 67.0
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 2.7e-128 462.6 357 62.7
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 4.6e-128 461.8 355 62.8
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 4.6e-128 461.8 329 67.5
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 1.0e-127 460.7 331 64.4
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.3e-127 460.3 344 62.2
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 2.3e-127 459.5 329 67.2
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 3.9e-127 458.8 359 63.8
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 3.9e-127 458.8 355 62.8
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 8.7e-127 457.6 362 61.9
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 1.5e-126 456.8 332 65.1
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 4.3e-126 455.3 354 62.1
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 4.3e-126 455.3 326 66.6
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 5.6e-126 454.9 329 66.6
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 3.6e-125 452.2 350 63.1
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 3.6e-125 452.2 357 63.0
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 4.8e-125 451.8 354 60.7
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 4.8e-125 451.8 354 63.8
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.8e-124 449.9 345 63.8
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 3.1e-124 449.1 325 66.2
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 5.3e-124 448.4 333 64.3
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 1.7e-122 443.4 353 61.2
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 3.8e-122 442.2 392 55.6
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 8.4e-122 441.0 338 62.7
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 1.1e-121 440.7 346 62.1
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.4e-121 440.3 352 61.9
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.4e-121 440.3 352 61.9
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 1.9e-121 439.9 356 60.1
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 2.4e-121 439.5 340 62.1
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 9.3e-121 437.6 354 60.7
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 1.6e-120 436.8 352 61.6
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 3.5e-120 435.6 348 62.1
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 3.5e-120 435.6 348 62.1
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 3.5e-120 435.6 380 58.7
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 4.6e-120 435.3 345 61.7
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 6.0e-120 434.9 316 64.9
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 6.0e-120 434.9 326 62.9
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 7.9e-120 434.5 385 57.7
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 1.0e-119 434.1 349 61.9
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 1.8e-119 433.3 331 62.8
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 1.8e-119 433.3 348 62.1
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 2.3e-119 433.0 351 61.8
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 2.5e-118 429.5 335 62.1
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 2.5e-118 429.5 346 61.3
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 6.2e-117 424.9 351 60.7
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 1.4e-116 423.7 333 62.8
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 5.3e-116 421.8 333 62.2
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 9.9e-115 417.5 418 51.9
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 9.3e-113 411.0 330 60.0
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 4.6e-112 408.7 331 59.5
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.3e-111 407.1 335 58.5
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 4.8e-109 398.7 352 56.5
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 6.2e-109 398.3 290 63.8
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 2.0e-107 393.3 347 57.3
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 3.4e-107 392.5 354 56.5
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 2.9e-106 389.4 489 46.0
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 7.1e-105 384.8 275 66.5
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 2.3e-103 379.8 356 54.5
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 7.4e-102 374.8 349 55.6
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.4e-100 369.8 272 63.2
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 4.5e-99 365.5 352 56.0
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 7.6e-99 364.8 334 55.7
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 7.2e-97 358.2 276 62.3
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 1.2e-96 357.5 352 54.8
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 8.8e-95 351.3 337 54.9
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 1.5e-94 350.5 280 59.3
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 1.7e-93 347.1 242 66.1
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 8.2e-93 344.7 252 64.3
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 2.3e-87 326.6 246 61.8
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 1.4e-81 307.4 328 48.8
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 4.2e-81 305.8 337 46.9
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 7.2e-81 305.1 367 47.1
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.1e-80 302.0 334 50.0
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 5.7e-78 295.4 237 56.5
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 3.2e-73 279.6 344 44.5
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 2.4e-68 263.5 165 68.5
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.0e-67 260.4 187 62.0
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 2.5e-57 226.9 345 37.7
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 4.3e-33 146.4 154 46.1
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 1.5e-30 137.9 101 73.3
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.9e-29 132.9 78 73.1
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 2.5e-25 120.6 103 63.1
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 7.8e-19 99.0 75 72.0
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 4.2e-12 76.6 97 45.4
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 8.7e-10 68.9 39 74.4
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.5e-09 68.2 50 54.0
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 1.9e-09 67.8 57 63.2
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 2.1e-08 64.3 49 55.1
SEGI_34366 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 3.4e-06 57.0 57 42.1


User provided reference genes

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