Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.2e-51 206.1 97 100.0
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 2.9e-40 168.3 91 83.5
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 3.8e-40 167.9 91 83.5
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 8.4e-40 166.8 91 85.7
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 2.4e-39 165.2 91 83.5
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 3.2e-39 164.9 91 81.3
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 3.2e-39 164.9 91 81.3
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 4.2e-39 164.5 91 81.3
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 4.2e-39 164.5 91 83.5
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 4.2e-39 164.5 117 70.9
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 5.4e-39 164.1 91 81.3
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 9.3e-39 163.3 91 80.2
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 9.3e-39 163.3 91 81.3
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.2e-38 162.9 91 80.2
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 1.2e-38 162.9 91 84.6
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 2.7e-38 161.8 91 83.5
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.7e-38 161.8 91 79.1
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 2.7e-38 161.8 91 79.1
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 3.5e-38 161.4 91 78.0
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 3.5e-38 161.4 91 80.2
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 3.5e-38 161.4 91 79.1
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 6.0e-38 160.6 91 80.2
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 6.0e-38 160.6 91 78.0
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 6.0e-38 160.6 91 80.2
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 6.0e-38 160.6 91 79.1
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 6.0e-38 160.6 91 76.9
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 7.8e-38 160.2 90 78.9
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 7.8e-38 160.2 91 78.0
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 7.8e-38 160.2 91 78.0
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 7.8e-38 160.2 91 79.1
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 1.0e-37 159.8 91 80.2
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.0e-37 159.8 91 79.1
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.3e-37 159.5 91 78.0
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 1.7e-37 159.1 91 78.0
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 2.3e-37 158.7 91 79.1
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 2.3e-37 158.7 91 76.9
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 2.3e-37 158.7 91 76.9
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 3.0e-37 158.3 91 76.9
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 3.9e-37 157.9 91 76.9
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.9e-37 157.9 91 78.0
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.9e-37 157.9 91 78.0
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 3.9e-37 157.9 91 78.0
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 3.9e-37 157.9 91 76.9
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 5.1e-37 157.5 89 77.5
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 6.6e-37 157.1 91 76.9
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 6.6e-37 157.1 91 76.9
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 6.6e-37 157.1 91 76.9
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 6.6e-37 157.1 91 73.6
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 8.7e-37 156.8 91 75.8
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 8.7e-37 156.8 91 76.9
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 8.7e-37 156.8 90 77.8
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 1.1e-36 156.4 91 78.0
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 1.5e-36 156.0 91 78.0
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 1.9e-36 155.6 91 74.7
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 1.9e-36 155.6 89 78.7
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 1.9e-36 155.6 91 75.8
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 2.5e-36 155.2 91 76.9
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 2.5e-36 155.2 91 74.7
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 3.3e-36 154.8 91 76.9
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 3.3e-36 154.8 91 78.0
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 3.3e-36 154.8 91 74.7
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 3.3e-36 154.8 91 76.9
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 75.8
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 76.9
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 76.9
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 76.9
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 76.9
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 76.9
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 76.9
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 76.9
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 76.9
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 4.3e-36 154.5 91 75.8
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 5.6e-36 154.1 91 73.6
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 5.6e-36 154.1 91 73.6
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 5.6e-36 154.1 91 75.8
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 7.3e-36 153.7 91 75.8
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 7.3e-36 153.7 91 76.9
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 7.3e-36 153.7 92 75.0
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 7.3e-36 153.7 91 75.8
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 7.3e-36 153.7 91 74.7
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 7.3e-36 153.7 91 70.3
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 9.6e-36 153.3 91 75.8
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 9.6e-36 153.3 91 75.8
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 9.6e-36 153.3 91 72.5
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 1.3e-35 152.9 91 76.9
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.3e-35 152.9 91 74.7
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 2.1e-35 152.1 91 73.6
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 2.1e-35 152.1 91 75.8
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 2.8e-35 151.8 91 74.7
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 4.8e-35 151.0 91 76.9
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 6.2e-35 150.6 88 75.0
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 8.1e-35 150.2 90 75.6
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.4e-34 149.4 91 74.7
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.8e-34 149.1 91 72.5
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 1.8e-34 149.1 88 73.9
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 5.3e-34 147.5 89 74.2
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 2.0e-33 145.6 89 71.9
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 2.6e-33 145.2 77 83.1
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 4.5e-33 144.4 112 62.5
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 7.6e-33 143.7 91 67.0
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 2.9e-32 141.7 91 70.3
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 3.8e-32 141.4 91 68.1
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 3.8e-32 141.4 119 58.8
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 8.4e-32 140.2 91 70.3
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 3.2e-31 138.3 90 65.6
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 3.0e-29 131.7 81 69.1
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 3.9e-29 131.3 90 63.3
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 5.1e-29 131.0 88 61.4
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 3.3e-28 128.3 89 65.2
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 1.1e-26 123.2 140 46.4
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.4e-26 122.9 77 70.1
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 1.4e-26 122.9 89 66.3
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 2.0e-25 119.0 91 65.9
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 2.4e-23 112.1 64 78.1
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 1.2e-22 109.8 81 63.0
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 7.9e-22 107.1 88 54.5
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 8.7e-21 103.6 96 51.0
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 2.4e-18 95.5 47 87.2
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 4.0e-18 94.7 47 89.4
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 5.3e-18 94.4 47 89.4
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 9.0e-18 93.6 90 51.1
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 2.6e-17 92.0 50 84.0
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 3.4e-17 91.7 47 87.2
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 3.4e-17 91.7 47 83.0
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 5.8e-17 90.9 48 85.4
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.6e-14 82.8 89 44.9
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 9.7e-12 73.6 80 43.8
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 3.7e-11 71.6 36 91.7
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 5.0e-08 61.2 33 78.8
TAR623G0306 Trochodendron aralioides HOM05D003242 ORTHO05D003593 8.5e-08 60.5 43 65.1
Haze_01489 Corylus avellana HOM05D005819 ORTHO05D006780 1.6e-06 56.2 31 74.2


User provided reference genes

Program Settings