Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 4.9e-191 671.0 347 100.0
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 1.2e-48 198.0 360 41.7
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 7.6e-43 178.7 362 38.1
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 8.4e-42 175.3 356 38.5
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 1.9e-41 174.1 359 39.0
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 2.3e-39 167.2 363 35.5
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 1.1e-38 164.9 362 39.0
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 2.0e-35 154.1 337 40.4
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 4.5e-35 152.9 360 36.9
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 7.6e-35 152.1 359 36.5
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 3.8e-34 149.8 316 38.6
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 5.0e-34 149.4 346 34.7
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 6.5e-34 149.1 363 35.3
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 8.4e-34 148.7 347 35.7
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 3.2e-33 146.7 329 37.4
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 2.1e-32 144.1 360 34.4
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 6.1e-32 142.5 351 36.5
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 7.9e-32 142.1 364 33.2
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.3e-31 141.4 380 32.4
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 5.1e-31 139.4 369 33.3
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 6.7e-31 139.0 357 34.5
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 3.3e-30 136.7 372 33.3
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 5.7e-30 136.0 348 35.3
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 7.4e-30 135.6 355 34.4
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 9.7e-30 135.2 335 34.9
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 1.3e-29 134.8 362 35.1
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 3.7e-29 133.3 330 34.8
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 4.8e-29 132.9 317 33.4
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 4.8e-29 132.9 362 33.7
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 1.8e-28 131.0 379 32.2
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 4.1e-28 129.8 355 32.7
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 9.0e-28 128.6 360 32.8
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 1.5e-27 127.9 371 32.9
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 2.0e-27 127.5 338 33.7
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.6e-27 127.1 322 32.3
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 4.5e-27 126.3 348 33.3
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 1.7e-26 124.4 419 30.8
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 1.7e-26 124.4 352 33.2
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 2.9e-26 123.6 359 31.8
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 3.8e-26 123.2 367 30.8
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 5.0e-26 122.9 351 31.9
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 8.5e-26 122.1 346 31.5
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 2.5e-25 120.6 354 32.5
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 3.2e-25 120.2 355 33.2
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 4.2e-25 119.8 365 34.0
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 7.2e-25 119.0 350 32.0
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 9.4e-25 118.6 365 33.2
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 1.6e-24 117.9 195 41.5
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 2.1e-24 117.5 361 33.0
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 4.6e-24 116.3 322 31.7
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 6.1e-24 115.9 333 33.3
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 7.9e-24 115.5 348 32.5
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 1.0e-23 115.2 354 30.8
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 3.9e-23 113.2 339 31.3
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 5.1e-23 112.8 357 32.8
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 1.1e-22 111.7 337 33.8
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.5e-22 111.3 365 29.3
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 9.7e-22 108.6 344 30.5
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 2.2e-21 107.5 323 32.2
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.2e-21 105.5 424 30.0
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 8.2e-21 105.5 334 31.1
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 8.2e-21 105.5 364 29.4
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 1.4e-20 104.8 431 29.0
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 1.4e-20 104.8 333 31.8
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.8e-20 104.4 384 29.2
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 6.9e-20 102.4 362 29.3
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 6.9e-20 102.4 279 33.3
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 9.1e-20 102.1 362 31.2
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 1.2e-19 101.7 333 29.1
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 5.9e-19 99.4 345 30.1
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 1.3e-18 98.2 342 29.5
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 2.9e-18 97.1 374 28.9
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 2.9e-18 97.1 208 35.6
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 2.9e-18 97.1 314 33.1
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 3.8e-18 96.7 364 28.8
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 1.1e-17 95.1 347 27.7
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 1.1e-17 95.1 350 30.6
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 1.1e-17 95.1 360 30.6
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 4.2e-17 93.2 353 27.5
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 3.6e-16 90.1 355 27.6
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 1.8e-15 87.8 361 29.1
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 2.3e-15 87.4 295 28.8
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 5.1e-15 86.3 371 28.6
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 6.7e-15 85.9 343 29.7
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.1e-14 85.1 351 26.2
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 1.5e-14 84.7 348 27.0
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 1.5e-14 84.7 358 28.5
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 3.3e-14 83.6 185 33.5
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 7.4e-14 82.4 330 28.2
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 9.7e-14 82.0 359 28.1
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.3e-13 81.6 208 34.6
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 2.2e-13 80.9 149 36.9
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 4.8e-13 79.7 358 23.7
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 1.4e-12 78.2 366 28.4
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.8e-12 77.8 363 25.1
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 2.4e-12 77.4 353 28.6
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 9.1e-12 75.5 298 27.9
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 1.2e-11 75.1 282 27.3
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 1.5e-11 74.7 368 27.7
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 2.0e-11 74.3 362 27.3
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 4.5e-11 73.2 355 26.8
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 8.5e-10 68.9 370 24.9
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 3.2e-09 67.0 359 27.0
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 1.2e-08 65.1 359 26.7
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 1.6e-08 64.7 139 33.1
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 3.0e-07 60.5 341 24.3
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 3.3e-06 57.0 104 31.7
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 5.7e-06 56.2 60 46.7
TAR626G0200 Trochodendron aralioides HOM05D005864 ORTHO05D006770 7.5e-06 55.8 164 32.9


User provided reference genes

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