Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021179 Daucus carota HOM05D002959 ORTHO05D003237 3.0e-76 288.5 153 100.0
Dinv05448 Davidia involucrata HOM05D002959 ORTHO05D003237 7.8e-16 87.8 156 40.4
TAR626G0389 Trochodendron aralioides HOM05D002959 ORTHO05D003237 1.0e-15 87.4 145 41.4
TAR626G1024 Trochodendron aralioides HOM05D002959 ORTHO05D003237 1.7e-15 86.7 145 41.4
HanXRQChr15g0496411 Helianthus annuus HOM05D002959 ORTHO05D003237 2.3e-15 86.3 145 38.6
Nn1g03594 Nelumbo nucifera HOM05D002959 ORTHO05D003237 3.0e-15 85.9 143 38.5
ECA233G6126 Erigeron canadensis HOM05D002959 ORTHO05D003237 5.1e-15 85.1 146 38.4
MD17G1095300 Malus domestica HOM05D002959 ORTHO05D003237 1.5e-14 83.6 152 37.5
MD17G1095200 Malus domestica HOM05D002959 ORTHO05D003237 1.9e-14 83.2 155 37.4
Ca_26237_v3 Cicer arietinum L. HOM05D002959 ORTHO05D003237 4.3e-14 82.0 155 37.4
Hma1.2p1_0948F.1_g240420 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 4.3e-14 82.0 157 35.0
Hma1.2p1_1768F.1_g301525 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 4.3e-14 82.0 157 35.0
TPR.G4665 Trifolium pratense HOM05D002959 ORTHO05D003237 4.3e-14 82.0 149 35.6
Cc05_g04870 Coffea canephora HOM05D002959 ORTHO05D003237 5.6e-14 81.6 154 35.7
Duzib065G0003 Durio zibethinus HOM05D002959 ORTHO05D003237 5.6e-14 81.6 145 34.5
Lj1A759T41 Lonicera japonica HOM05D002959 ORTHO05D003237 5.6e-14 81.6 145 37.2
Lj1A760T25 Lonicera japonica HOM05D002959 ORTHO05D003237 7.3e-14 81.3 145 37.2
ATR0752G073 Amborella trichopoda HOM05D002959 ORTHO05D003237 9.5e-14 80.9 145 35.2
Cpa.g.sc4.170 Carica papaya HOM05D002959 ORTHO05D003237 1.6e-13 80.1 149 36.9
Cfa014417 Carpinus fangiana HOM05D002959 ORTHO05D003237 2.1e-13 79.7 154 37.0
MBI18_g10793_MAGBIO Magnolia biondii HOM05D002959 ORTHO05D003237 2.1e-13 79.7 148 33.1
Psat7g158640 Pisum sativum HOM05D002959 ORTHO05D003237 2.1e-13 79.7 149 34.2
Lsat_1_v5_gn_8_128621 Lactuca sativa HOM05D002959 ORTHO05D003237 3.6e-13 79.0 145 37.2
CARHR126200 Cardamine hirsuta HOM05D002959 ORTHO05D003237 6.2e-13 78.2 150 32.7
Sp1g04070 Schrenkiella parvula HOM05D002959 ORTHO05D003237 6.2e-13 78.2 158 32.9
SpUn0024_0070 Schrenkiella parvula HOM05D002959 ORTHO05D003237 6.2e-13 78.2 158 32.9
Carub.0004s1373 Capsella rubella HOM05D002959 ORTHO05D003237 8.1e-13 77.8 148 31.8
Dinv39701 Davidia involucrata HOM05D002959 ORTHO05D003237 8.1e-13 77.8 154 34.4
FAN09G0349 Fragaria x ananassa HOM05D002959 ORTHO05D003237 8.1e-13 77.8 150 37.3
PSO675G5746 Papaver somniferum HOM05D002959 ORTHO05D003237 8.1e-13 77.8 151 31.1
Phvul.011G104500 Phaseolus vulgaris HOM05D002959 ORTHO05D003237 1.1e-12 77.4 154 33.1
Sc21g0001590 Simmondsia chinensis HOM05D002959 ORTHO05D003237 1.1e-12 77.4 152 34.9
Medtr4g047630 Medicago truncatula HOM05D002959 ORTHO05D003237 1.4e-12 77.0 149 34.2
Actinidia09710 Actinidia chinensis HOM05D002959 ORTHO05D003237 1.8e-12 76.6 153 34.6
ClCG02G001850 Citrullus lanatus HOM05D002959 ORTHO05D003237 1.8e-12 76.6 156 35.3
Lj3g0006213 Lotus japonicus HOM05D002959 ORTHO05D003237 1.8e-12 76.6 153 35.3
Prupe.3G218400 Prunus persica HOM05D002959 ORTHO05D003237 1.8e-12 76.6 150 35.3
TPR.G23666 Trifolium pratense HOM05D002959 ORTHO05D003237 1.8e-12 76.6 149 33.6
C05p03450 Brassica napus HOM05D002959 ORTHO05D003237 2.3e-12 76.3 152 32.9
Cc05_g04860 Coffea canephora HOM05D002959 ORTHO05D003237 2.3e-12 76.3 145 35.2
Aa31LG5G4670 Aethionema arabicum HOM05D002959 ORTHO05D003237 3.1e-12 75.9 151 31.8
BolC5t29124H Brassica oleracea HOM05D002959 ORTHO05D003237 3.1e-12 75.9 154 33.8
BraA10t42648Z Brassica rapa HOM05D002959 ORTHO05D003237 3.1e-12 75.9 152 32.2
FvH4_7g06210 Fragaria vesca HOM05D002959 ORTHO05D003237 3.1e-12 75.9 145 35.9
FAN06G3240 Fragaria x ananassa HOM05D002959 ORTHO05D003237 3.1e-12 75.9 150 35.3
PSO541G3942 Papaver somniferum HOM05D002959 ORTHO05D003237 3.1e-12 75.9 151 31.1
RcHm_v2.0_Chr2g0159721 Rosa chinensis HOM05D002959 ORTHO05D003237 3.1e-12 75.9 152 34.2
A10p03750 Brassica napus HOM05D002959 ORTHO05D003237 4.0e-12 75.5 152 30.9
Haze_12877 Corylus avellana HOM05D002959 ORTHO05D003237 4.0e-12 75.5 156 34.6
Glyma.06G303800 Glycine max HOM05D002959 ORTHO05D003237 4.0e-12 75.5 154 34.4
CARHR004690 Cardamine hirsuta HOM05D002959 ORTHO05D003237 5.2e-12 75.1 154 32.5
PGR042G1226 Punica granatum HOM05D002959 ORTHO05D003237 5.2e-12 75.1 149 36.2
AL4G27760 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 6.8e-12 74.7 152 30.9
CAN.G846.3 Capsicum annuum HOM05D002959 ORTHO05D003237 6.8e-12 74.7 146 36.3
CANSAT64G0672 Cannabis sativa HOM05D002959 ORTHO05D003237 8.9e-12 74.3 155 33.5
CANSAT64G1461 Cannabis sativa HOM05D002959 ORTHO05D003237 8.9e-12 74.3 154 32.5
HanXRQChr15g0496401 Helianthus annuus HOM05D002959 ORTHO05D003237 8.9e-12 74.3 144 34.0
AT2G32380 Arabidopsis thaliana HOM05D002959 ORTHO05D003237 1.2e-11 73.9 152 30.9
COL.COLO4_27694 Corchorus olitorius HOM05D002959 ORTHO05D003237 1.2e-11 73.9 155 34.8
Eucgr.A01714 Eucalyptus grandis HOM05D002959 ORTHO05D003237 1.2e-11 73.9 154 35.1
Glyma.12G099900 Glycine max HOM05D002959 ORTHO05D003237 1.2e-11 73.9 154 33.8
Lalb_Chr03g0028761 Lupinus albus HOM05D002959 ORTHO05D003237 1.2e-11 73.9 152 30.9
Os07g0458700 Oryza sativa ssp. japonica HOM05D002959 ORTHO05D003237 1.2e-11 73.9 153 35.3
PSO210G7437 Papaver somniferum HOM05D002959 ORTHO05D003237 1.2e-11 73.9 127 34.6
Carub.0001s0449 Capsella rubella HOM05D002959 ORTHO05D003237 2.0e-11 73.2 154 31.2
CiPaw.03G161200 Carya illinoinensis HOM05D002959 ORTHO05D003237 2.0e-11 73.2 154 34.4
ECA233G1396 Erigeron canadensis HOM05D002959 ORTHO05D003237 2.0e-11 73.2 97 37.1
Thecc.02G313300 Theobroma cacao HOM05D002959 ORTHO05D003237 2.0e-11 73.2 145 32.4
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 2.6e-11 72.8 152 35.5
MD17G1095500 Malus domestica HOM05D002959 ORTHO05D003237 2.6e-11 72.8 152 34.2
Potri.009G117800 Populus trichocarpa HOM05D002959 ORTHO05D003237 2.6e-11 72.8 156 32.7
Zm00001eb305670 Zea mays HOM05D002959 ORTHO05D003237 2.6e-11 72.8 154 33.1
COL.COLO4_27697 Corchorus olitorius HOM05D002959 ORTHO05D003237 3.4e-11 72.4 155 34.2
FAN02G0167 Fragaria x ananassa HOM05D002959 ORTHO05D003237 3.4e-11 72.4 152 35.5
MD09G1107600 Malus domestica HOM05D002959 ORTHO05D003237 3.4e-11 72.4 153 31.4
C08p01810 Brassica napus HOM05D002959 ORTHO05D003237 4.4e-11 72.0 156 31.4
BolC8t46981H Brassica oleracea HOM05D002959 ORTHO05D003237 4.4e-11 72.0 156 31.4
Thhalv10017325m.g Eutrema salsugineum HOM05D002959 ORTHO05D003237 4.4e-11 72.0 149 31.5
Peaxi162Scf00007g00929 Petunia axillaris HOM05D002959 ORTHO05D003237 4.4e-11 72.0 146 34.2
PGSC0003DMG400025497 Solanum tuberosum HOM05D002959 ORTHO05D003237 4.4e-11 72.0 146 35.6
VMungo1127G2165 Vigna mungo HOM05D002959 ORTHO05D003237 4.4e-11 72.0 156 31.4
Gorai.008G173100 Gossypium raimondii HOM05D002959 ORTHO05D003237 5.8e-11 71.6 149 36.2
Atru.chr6.3170 Acer truncatum HOM05D002959 ORTHO05D003237 7.6e-11 71.2 149 32.9
Os07g0458500 Oryza sativa ssp. japonica HOM05D002959 ORTHO05D003237 7.6e-11 71.2 158 34.2
Prupe.3G218100 Prunus persica HOM05D002959 ORTHO05D003237 7.6e-11 71.2 154 31.2
A08p36530 Brassica napus HOM05D002959 ORTHO05D003237 9.9e-11 70.9 156 31.4
COL.COLO4_27690 Corchorus olitorius HOM05D002959 ORTHO05D003237 9.9e-11 70.9 155 33.5
CsaV3_7G003690 Cucumis sativus L. HOM05D002959 ORTHO05D003237 9.9e-11 70.9 147 35.4
Duzib251G0741 Durio zibethinus HOM05D002959 ORTHO05D003237 9.9e-11 70.9 145 31.7
FvH4_6g43380 Fragaria vesca HOM05D002959 ORTHO05D003237 9.9e-11 70.9 152 35.5
Solyc07g052430.3 Solanum lycopersicum HOM05D002959 ORTHO05D003237 9.9e-11 70.9 145 33.8
AL1G14980 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 1.3e-10 70.5 156 32.1
AL4G27750 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 1.3e-10 70.5 153 30.1
BcaC07g36857 Brassica carinata HOM05D002959 ORTHO05D003237 1.3e-10 70.5 156 33.3
AUR62025051 Chenopodium quinoa HOM05D002959 ORTHO05D003237 1.3e-10 70.5 148 36.5
Duzib268G1581 Durio zibethinus HOM05D002959 ORTHO05D003237 1.3e-10 70.5 145 31.7
Gohir.D12G160000 Gossypium hirsutum HOM05D002959 ORTHO05D003237 1.3e-10 70.5 149 35.6
QL08p033321 Quercus lobata HOM05D002959 ORTHO05D003237 1.3e-10 70.5 154 32.5
PGSC0003DMG400025496 Solanum tuberosum HOM05D002959 ORTHO05D003237 1.3e-10 70.5 146 34.9
BraA08t35554Z Brassica rapa HOM05D002959 ORTHO05D003237 1.7e-10 70.1 156 31.4
CsaV3_4G005160 Cucumis sativus L. HOM05D002959 ORTHO05D003237 1.7e-10 70.1 154 30.5
Gohir.D02G134100 Gossypium hirsutum HOM05D002959 ORTHO05D003237 1.7e-10 70.1 148 31.8
Gorai.005G150000 Gossypium raimondii HOM05D002959 ORTHO05D003237 1.7e-10 70.1 145 32.4
FAN14G2056 Fragaria x ananassa HOM05D002959 ORTHO05D003237 2.2e-10 69.7 152 34.9
Gohir.A03G109000 Gossypium hirsutum HOM05D002959 ORTHO05D003237 2.2e-10 69.7 148 31.8
Manes.12G075500 Manihot esculenta HOM05D002959 ORTHO05D003237 2.2e-10 69.7 149 34.2
Sopen07g026060 Solanum pennellii HOM05D002959 ORTHO05D003237 2.2e-10 69.7 146 33.6
HPP92_010103 Vanilla planifolia HOM05D002959 ORTHO05D003237 2.2e-10 69.7 142 31.0
EL10Ac9g20667 Beta vulgaris HOM05D002959 ORTHO05D003237 2.9e-10 69.3 148 35.1
AUR62037134 Chenopodium quinoa HOM05D002959 ORTHO05D003237 2.9e-10 69.3 148 35.1
THA.LOC104800984 Tarenaya hassleriana HOM05D002959 ORTHO05D003237 2.9e-10 69.3 152 30.9
Ciclev10016979m.g Citrus clementina HOM05D002959 ORTHO05D003237 3.8e-10 68.9 152 32.9
MELO3C017552.2 Cucumis melo HOM05D002959 ORTHO05D003237 3.8e-10 68.9 154 31.8
DCAR_012948 Daucus carota HOM05D002959 ORTHO05D003237 3.8e-10 68.9 152 33.6
Dinv05451 Davidia involucrata HOM05D002959 ORTHO05D003237 3.8e-10 68.9 153 32.7
CAN.G846.4 Capsicum annuum HOM05D002959 ORTHO05D003237 4.9e-10 68.6 146 34.2
MD17G1095800 Malus domestica HOM05D002959 ORTHO05D003237 4.9e-10 68.6 152 30.9
Os03g0646400 Oryza sativa ssp. japonica HOM05D002959 ORTHO05D003237 4.9e-10 68.6 158 31.6
Solyc07g052440.3 Solanum lycopersicum HOM05D002959 ORTHO05D003237 4.9e-10 68.6 146 34.2
Aa31LG1G19530 Aethionema arabicum HOM05D002959 ORTHO05D003237 6.4e-10 68.2 155 31.0
Aqoxy1G03306 Aquilegia oxysepala HOM05D002959 ORTHO05D003237 6.4e-10 68.2 152 36.2
AT1G05210 Arabidopsis thaliana HOM05D002959 ORTHO05D003237 6.4e-10 68.2 156 30.8
FvH4_6g43330 Fragaria vesca HOM05D002959 ORTHO05D003237 6.4e-10 68.2 152 32.2
FAN14G3479 Fragaria x ananassa HOM05D002959 ORTHO05D003237 6.4e-10 68.2 152 32.2
RcHm_v2.0_Chr2g0159661 Rosa chinensis HOM05D002959 ORTHO05D003237 6.4e-10 68.2 158 33.5
COL.COLO4_27693 Corchorus olitorius HOM05D002959 ORTHO05D003237 8.4e-10 67.8 155 32.9
Gohir.A12G157100 Gossypium hirsutum HOM05D002959 ORTHO05D003237 8.4e-10 67.8 151 35.8
Hma1.2p1_1768F.1_g301560 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 8.4e-10 67.8 172 32.6
COL.COLO4_27698 Corchorus olitorius HOM05D002959 ORTHO05D003237 1.1e-09 67.4 145 29.7
Duzib251G0878 Durio zibethinus HOM05D002959 ORTHO05D003237 1.1e-09 67.4 150 30.7
Oeu041931.2 Olea europaea HOM05D002959 ORTHO05D003237 1.1e-09 67.4 155 34.8
Sabra09G0090200 Salix brachista HOM05D002959 ORTHO05D003237 1.1e-09 67.4 154 30.5
ECA233G3122 Erigeron canadensis HOM05D000906 ORTHO05D000713 1.4e-09 67.0 145 33.8
Migut.M00412 Erythranthe guttata HOM05D002959 ORTHO05D003237 1.4e-09 67.0 150 33.3
MBI18_g10797_MAGBIO Magnolia biondii HOM05D002959 ORTHO05D003237 1.4e-09 67.0 145 31.7
Nitab4.5_0002137g0130 Nicotiana tabacum HOM05D002959 ORTHO05D003237 1.4e-09 67.0 146 34.2
Nitab4.5_0009026g0020 Nicotiana tabacum HOM05D002959 ORTHO05D003237 1.4e-09 67.0 145 32.4
PSO210G0061 Papaver somniferum HOM05D002959 ORTHO05D003237 1.4e-09 67.0 151 29.8
arahy.Tifrunner.gnm1.ann1.X4J0KT Arachis hypogaea HOM05D002959 ORTHO05D003237 1.9e-09 66.6 155 30.3
MELO3C018810.2 Cucumis melo HOM05D002959 ORTHO05D003237 1.9e-09 66.6 142 31.7
Prupe.3G218200 Prunus persica HOM05D002959 ORTHO05D003237 1.9e-09 66.6 154 31.2
Sed0004815 Sechium edule HOM05D002959 ORTHO05D003237 1.9e-09 66.6 152 32.2
AL1G14990 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 2.4e-09 66.2 153 32.0
MD17G1095600 Malus domestica HOM05D002959 ORTHO05D003237 2.4e-09 66.2 155 31.0
Thhalv10008934m.g Eutrema salsugineum HOM05D002959 ORTHO05D003237 3.2e-09 65.9 152 28.9
MD09G1107500 Malus domestica HOM05D002959 ORTHO05D003237 3.2e-09 65.9 155 30.3
Sopen07g026070 Solanum pennellii HOM05D002959 ORTHO05D003237 3.2e-09 65.9 146 33.6
AT1G05220 Arabidopsis thaliana HOM05D002959 ORTHO05D003237 4.1e-09 65.5 153 31.4
arahy.Tifrunner.gnm1.ann1.18208U Arachis hypogaea HOM05D002959 ORTHO05D003237 4.1e-09 65.5 155 29.7
COL.COLO4_27696 Corchorus olitorius HOM05D002959 ORTHO05D003237 4.1e-09 65.5 155 32.3
FAN09G2165 Fragaria x ananassa HOM05D002959 ORTHO05D003237 4.1e-09 65.5 96 34.4
PSO541G0978 Papaver somniferum HOM05D002959 ORTHO05D003237 4.1e-09 65.5 96 36.5
unitig_699.g19615 Utricularia gibba HOM05D000109 ORTHO05D003237 5.4e-09 65.1 146 31.5
Gohir.D12G159600 Gossypium hirsutum HOM05D002959 ORTHO05D003237 9.2e-09 64.3 147 29.3
Gorai.008G172900 Gossypium raimondii HOM05D002959 ORTHO05D003237 9.2e-09 64.3 147 29.3
PSO478G4511 Papaver somniferum HOM05D002959 ORTHO05D003237 9.2e-09 64.3 139 30.2
CSS0017236 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 1.2e-08 63.9 152 32.9
CDE02G3691 Ceratophyllum demersum HOM05D002959 ORTHO05D003237 1.2e-08 63.9 117 33.3
TWI36G0789 Tripterygium wilfordii HOM05D002959 ORTHO05D003237 1.2e-08 63.9 152 32.2
COL.COLO4_27695 Corchorus olitorius HOM05D002959 ORTHO05D003237 1.6e-08 63.5 146 28.8
Gohir.A12G156800 Gossypium hirsutum HOM05D002959 ORTHO05D003237 1.6e-08 63.5 143 30.1
Manes.13G070900 Manihot esculenta HOM05D002959 ORTHO05D003237 1.6e-08 63.5 149 30.2
MSTRG.6556 Avicennia marina HOM05D002959 ORTHO05D003237 2.1e-08 63.2 148 32.4
ClCG07G009050 Citrullus lanatus HOM05D002959 ORTHO05D003237 2.7e-08 62.8 151 31.8
Cc05_g04880 Coffea canephora HOM05D002959 ORTHO05D003237 2.7e-08 62.8 146 31.5
COL.COLO4_27691 Corchorus olitorius HOM05D002959 ORTHO05D003237 2.7e-08 62.8 155 31.6
Duzib268G0859 Durio zibethinus HOM05D002959 ORTHO05D003237 3.5e-08 62.4 151 30.5
FAN05G2600 Fragaria x ananassa HOM05D002959 ORTHO05D003237 3.5e-08 62.4 143 31.5
Lj8A124T46 Lonicera japonica HOM05D002959 ORTHO05D003237 3.5e-08 62.4 112 35.7
TWI36G0566 Tripterygium wilfordii HOM05D002959 ORTHO05D003237 3.5e-08 62.4 154 31.8
Sed0000729 Sechium edule HOM05D002959 ORTHO05D003237 6.0e-08 61.6 152 30.9
CAN.G846.2 Capsicum annuum HOM05D002959 ORTHO05D003237 1.0e-07 60.8 147 32.7
CSS0034965 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 1.3e-07 60.5 146 32.2
GSVIVG01030603001 Vitis vinifera HOM05D002959 ORTHO05D003237 1.3e-07 60.5 101 35.6
FvH4_6g43370 Fragaria vesca HOM05D002959 ORTHO05D003237 1.7e-07 60.1 156 32.1
Hma1.2p1_1768F.1_g301550 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 1.7e-07 60.1 107 38.3
CSS0045723 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 2.3e-07 59.7 146 31.5
Hma1.2p1_0328F.1_g126790 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 5.1e-07 58.5 108 38.0
CSS0025283 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 6.6e-07 58.2 155 29.7
SalBow7G4760 Salvia bowleyana HOM05D002959 ORTHO05D003237 6.6e-07 58.2 136 34.6
CSS0022033 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 8.6e-07 57.8 152 30.3
RcHm_v2.0_Chr2g0159681 Rosa chinensis HOM05D002959 ORTHO05D003237 2.5e-06 56.2 103 35.0
Gohir.D12G159900 Gossypium hirsutum HOM05D002959 ORTHO05D003237 5.6e-06 55.1 155 29.0
Gohir.A12G157000 Gossypium hirsutum HOM05D002959 ORTHO05D003237 7.3e-06 54.7 155 29.0


User provided reference genes

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