Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021174 Daucus carota HOM05D005769 ORTHO05D006851 6.8e-90 334.0 166 100.0
Glyma.14G025400 Glycine max HOM05D005769 ORTHO05D006851 7.2e-15 84.7 169 37.9
Nn1g03582 Nelumbo nucifera HOM05D005769 ORTHO05D006851 2.7e-14 82.8 163 38.0
Phvul.008G265600 Phaseolus vulgaris HOM05D005769 ORTHO05D006851 6.1e-14 81.6 169 37.9
Manes.03G126700 Manihot esculenta HOM05D005769 ORTHO05D006851 3.0e-13 79.3 160 34.4
Prupe.4G209200 Prunus persica HOM05D005769 ORTHO05D006851 3.0e-13 79.3 169 34.9
VMungo0647G1996 Vigna mungo HOM05D005769 ORTHO05D006851 8.8e-13 77.8 174 35.1
Medtr5g092090 Medicago truncatula HOM05D005769 ORTHO05D006851 2.0e-12 76.6 171 36.3
Actinidia09713 Actinidia chinensis HOM05D005769 ORTHO05D006851 3.3e-12 75.9 161 38.5
Glyma.02G289500 Glycine max HOM05D005769 ORTHO05D006851 3.3e-12 75.9 171 35.1
Hma1.2p1_1748F.1_g300680 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 3.3e-12 75.9 151 37.1
Hma1.2p1_0328F.1_g126860 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 4.3e-12 75.5 152 36.8
Duzib213G1024 Durio zibethinus HOM05D005769 ORTHO05D006851 9.7e-12 74.3 166 34.3
Gohir.A01G077900 Gossypium hirsutum HOM05D005769 ORTHO05D006851 9.7e-12 74.3 165 32.7
Cc05_g04810 Coffea canephora HOM05D005769 ORTHO05D006851 1.3e-11 73.9 155 36.8
Thecc.07G043800 Theobroma cacao HOM05D005769 ORTHO05D006851 1.3e-11 73.9 166 31.3
Duzib170G0312 Durio zibethinus HOM05D005769 ORTHO05D006851 2.8e-11 72.8 166 33.7
MD11G1222100 Malus domestica HOM05D005769 ORTHO05D006851 3.7e-11 72.4 159 35.2
RcHm_v2.0_Chr5g0038281 Rosa chinensis HOM05D005769 ORTHO05D006851 3.7e-11 72.4 166 34.3
FAN16G0333 Fragaria x ananassa HOM05D005769 ORTHO05D006851 8.2e-11 71.2 166 34.3
Dinv40735 Davidia involucrata HOM05D005769 ORTHO05D006851 1.1e-10 70.9 157 32.5
Gohir.D01G065000 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.1e-10 70.9 166 30.1
PGR031G3409 Punica granatum HOM05D005769 ORTHO05D006851 1.4e-10 70.5 156 30.8
FAN25G3736 Fragaria x ananassa HOM05D005769 ORTHO05D006851 1.8e-10 70.1 166 34.3
Gohir.A04G019100 Gossypium hirsutum HOM05D005769 ORTHO05D006851 1.8e-10 70.1 161 33.5
Gorai.002G086700 Gossypium raimondii HOM05D005769 ORTHO05D006851 1.8e-10 70.1 167 32.3
FAN21G0668 Fragaria x ananassa HOM05D005769 ORTHO05D006851 2.4e-10 69.7 166 33.7
COL.COLO4_09632 Corchorus olitorius HOM05D005769 ORTHO05D006851 3.1e-10 69.3 168 33.3
QL08p011874 Quercus lobata HOM05D005769 ORTHO05D006851 3.1e-10 69.3 161 33.5
CSS0032413 Camellia sinensis var. sinensis HOM05D005769 ORTHO05D006851 4.1e-10 68.9 144 34.0
Cfa020385 Carpinus fangiana HOM05D005769 ORTHO05D006851 4.1e-10 68.9 156 35.9
Haze_09647 Corylus avellana HOM05D005769 ORTHO05D006851 4.1e-10 68.9 155 35.5
FvH4_3g22210 Fragaria vesca HOM05D005769 ORTHO05D006851 4.1e-10 68.9 166 33.7
FAN11G0604 Fragaria x ananassa HOM05D005769 ORTHO05D006851 4.1e-10 68.9 166 33.7
Cpa.g.sc97.35 Carica papaya HOM05D005769 ORTHO05D006851 5.3e-10 68.6 150 34.0
arahy.Tifrunner.gnm1.ann1.B7V00M Arachis hypogaea HOM05D005769 ORTHO05D006851 6.9e-10 68.2 162 31.5
Potri.001G421000 Populus trichocarpa HOM05D005769 ORTHO05D006851 6.9e-10 68.2 166 31.3
TAR626G0147 Trochodendron aralioides HOM05D005769 ORTHO05D006851 6.9e-10 68.2 165 35.8
Manes.15G073700 Manihot esculenta HOM05D005769 ORTHO05D006851 9.1e-10 67.8 156 34.0
QL08p012043 Quercus lobata HOM05D005769 ORTHO05D006851 9.1e-10 67.8 161 32.9
arahy.Tifrunner.gnm1.ann1.B9FWIC Arachis hypogaea HOM05D005769 ORTHO05D006851 2.0e-09 66.6 162 30.9
ECA234G1543 Erigeron canadensis HOM05D005769 ORTHO05D006851 4.5e-09 65.5 146 34.9
Lalb_Chr04g0248581 Lupinus albus HOM05D005769 ORTHO05D006851 7.7e-09 64.7 168 29.8
Ca_06306_v3 Cicer arietinum L. HOM05D005769 ORTHO05D006851 1.0e-08 64.3 178 31.5
CiPaw.11G187200 Carya illinoinensis HOM05D005769 ORTHO05D006851 1.3e-08 63.9 162 31.5
Ciclev10010329m.g Citrus clementina HOM05D005769 ORTHO05D006851 1.3e-08 63.9 165 30.9
Rhsim04G0001000 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.3e-08 63.9 159 31.4
Rhsim04G0002100 Rhododendron simsii HOM05D005769 ORTHO05D006851 1.3e-08 63.9 159 31.4
THA.LOC104813420 Tarenaya hassleriana HOM05D005769 ORTHO05D006851 1.3e-08 63.9 150 31.3
VMungo0540G0361 Vigna mungo HOM05D005769 ORTHO05D006851 1.7e-08 63.5 158 32.9
Gorai.009G425000 Gossypium raimondii HOM05D005769 ORTHO05D006851 2.2e-08 63.2 160 30.6
PSO832G0238 Papaver somniferum HOM05D005769 ORTHO05D006851 2.2e-08 63.2 172 29.7
TWI39G0743 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 3.8e-08 62.4 152 30.3
Gohir.D05G366600 Gossypium hirsutum HOM05D005769 ORTHO05D006851 5.0e-08 62.0 159 32.1
LjContig00351g0007061 Lotus japonicus HOM05D005769 ORTHO05D006851 5.0e-08 62.0 172 31.4
Potri.011G136600 Populus trichocarpa HOM05D005769 ORTHO05D006851 5.0e-08 62.0 162 30.9
TWI38G1097 Tripterygium wilfordii HOM05D005769 ORTHO05D006851 6.5e-08 61.6 161 29.8
Atru.chr2.3278 Acer truncatum HOM05D005769 ORTHO05D006851 8.5e-08 61.2 151 31.1
Lsat_1_v5_gn_5_125321 Lactuca sativa HOM05D005769 ORTHO05D006851 8.5e-08 61.2 149 35.6
Lj4g0016834 Lotus japonicus HOM05D005769 ORTHO05D006851 8.5e-08 61.2 165 32.1
Aqoxy1G03294 Aquilegia oxysepala HOM05D005769 ORTHO05D006851 1.1e-07 60.8 169 30.2
Sopen10g002310 Solanum pennellii HOM05D005769 ORTHO05D006851 1.1e-07 60.8 160 33.8
Solyc10g006360.2 Solanum lycopersicum HOM05D005769 ORTHO05D006851 1.4e-07 60.5 160 33.8
Hma1.2p1_1271F.1_g271830 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.9e-07 60.1 151 33.8
Hma1.2p1_1609F.1_g293426 Hydrangea macrophylla HOM05D005769 ORTHO05D006851 1.9e-07 60.1 151 33.8
Oeu005460.1 Olea europaea HOM05D005769 ORTHO05D006851 1.9e-07 60.1 160 32.5
PGSC0003DMG400014393 Solanum tuberosum HOM05D005769 ORTHO05D006851 1.9e-07 60.1 160 31.9
CiPaw.12G128000 Carya illinoinensis HOM05D005769 ORTHO05D006851 3.2e-07 59.3 161 31.1
Sabra16G0285900 Salix brachista HOM05D005769 ORTHO05D006851 4.2e-07 58.9 166 27.7
Lj8E167T2 Lonicera japonica HOM05D005769 ORTHO05D006851 5.5e-07 58.5 166 31.9
Glyma.18G101700 Glycine max HOM05D005769 ORTHO05D006851 9.4e-07 57.8 161 30.4
Peaxi162Scf00450g00084 Petunia axillaris HOM05D005769 ORTHO05D006851 1.2e-06 57.4 157 29.9
Lj6g0021335 Lotus japonicus HOM05D005769 ORTHO05D006851 2.7e-06 56.2 160 29.4
Oeu062604.3 Olea europaea HOM05D005769 ORTHO05D006851 3.6e-06 55.8 134 32.8
MBI18_g09843_MAGBIO Magnolia biondii HOM05D005769 ORTHO05D006851 7.9e-06 54.7 136 30.1
PSO675G2145 Papaver somniferum HOM05D005769 ORTHO05D006851 7.9e-06 54.7 153 31.4


User provided reference genes

Program Settings