Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021134 Daucus carota HOM05D000172 ORTHO05D008216 1.1e-23 112.5 57 100.0
DCAR_021133 Daucus carota HOM05D000172 ORTHO05D008216 1.6e-22 108.6 55 96.4
Nitab4.5_0010117g0030 Nicotiana tabacum HOM05D000172 ORTHO05D008216 3.0e-13 77.8 57 64.9
Gohir.A07G168450 Gossypium hirsutum HOM05D000172 ORTHO05D008216 6.7e-13 76.6 53 66.0
Manes.13G066180 Manihot esculenta HOM05D000172 ORTHO05D008216 6.7e-13 76.6 57 64.9
COL.COLO4_06741 Corchorus olitorius HOM05D000172 ORTHO05D008216 8.8e-13 76.3 41 82.9
Nitab4.5_0000130g0110 Nicotiana tabacum HOM05D000172 ORTHO05D008216 8.8e-13 76.3 57 63.2
PGSC0003DMG400000660 Solanum tuberosum HOM05D000172 ORTHO05D008216 8.8e-13 76.3 57 63.2
Gohir.D07G174800 Gossypium hirsutum HOM05D000172 ORTHO05D008216 1.1e-12 75.9 53 66.0
Gorai.001G195500 Gossypium raimondii HOM05D000172 ORTHO05D008216 1.5e-12 75.5 53 66.0
Peaxi162Scf01333g00137 Petunia axillaris HOM05D000172 ORTHO05D008216 1.9e-12 75.1 57 61.4
Thecc.01G183500 Theobroma cacao HOM05D000172 ORTHO05D008216 1.9e-12 75.1 57 63.2
Sed0000051 Sechium edule HOM05D000172 ORTHO05D008216 2.5e-12 74.7 57 61.4
CSS0028035 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 3.3e-12 74.3 57 63.2
Actinidia13731 Actinidia chinensis HOM05D000172 ORTHO05D008216 5.7e-12 73.6 57 59.6
Dinv39759 Davidia involucrata HOM05D000172 ORTHO05D008216 5.7e-12 73.6 57 61.4
Duzib138G0791 Durio zibethinus HOM05D000172 ORTHO05D000781 5.7e-12 73.6 53 64.2
Nn1g03358 Nelumbo nucifera HOM05D000172 ORTHO05D008216 5.7e-12 73.6 57 61.4
Sopen07g024820 Solanum pennellii HOM05D000172 ORTHO05D008216 5.7e-12 73.6 55 63.6
TAR624G1331 Trochodendron aralioides HOM05D000172 ORTHO05D008216 9.7e-12 72.8 57 63.2
Eucgr.K00733 Eucalyptus grandis HOM05D000172 ORTHO05D008216 1.3e-11 72.4 51 66.7
PGR142G2841 Punica granatum HOM05D000172 ORTHO05D008216 1.7e-11 72.0 51 66.7
CAN.G784.10 Capsicum annuum HOM05D000172 ORTHO05D008216 2.2e-11 71.6 57 61.4
Ciclev10016727m.g Citrus clementina HOM05D000172 ORTHO05D008216 2.2e-11 71.6 53 64.2
CsaV3_6G015520 Cucumis sativus L. HOM05D000172 ORTHO05D008216 2.2e-11 71.6 57 61.4
DCAR_019254 Daucus carota HOM05D000172 ORTHO05D008216 2.2e-11 71.6 44 72.7
EL10Ac9g22821 Beta vulgaris HOM05D000172 ORTHO05D008216 2.8e-11 71.2 57 61.4
Cfa014307 Carpinus fangiana HOM05D000172 ORTHO05D008216 2.8e-11 71.2 58 60.3
PSO210G7646 Papaver somniferum HOM05D000172 ORTHO05D008216 2.8e-11 71.2 43 76.7
PSO832G3827 Papaver somniferum HOM05D000172 ORTHO05D008216 2.8e-11 71.2 43 76.7
Aqoxy1G04174 Aquilegia oxysepala HOM05D000172 ORTHO05D008216 3.7e-11 70.9 55 58.2
Cpa.g.sc132.32 Carica papaya HOM05D000172 ORTHO05D008216 3.7e-11 70.9 57 63.2
Atru.chr6.3269 Acer truncatum HOM05D000172 ORTHO05D008216 4.8e-11 70.5 53 62.3
ClCG02G018130 Citrullus lanatus HOM05D000172 ORTHO05D008216 6.3e-11 70.1 57 59.6
Atru.chr6.3270 Acer truncatum HOM05D000172 ORTHO05D008216 8.2e-11 69.7 53 62.3
Hma1.2p1_2406F.1_g321460 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.1e-10 69.3 55 63.6
Sc12g0002040 Simmondsia chinensis HOM05D000172 ORTHO05D008216 1.1e-10 69.3 49 63.3
Cc05_g02620 Coffea canephora HOM05D000172 ORTHO05D008216 1.4e-10 68.9 57 57.9
Oeu003064.1 Olea europaea HOM05D000172 ORTHO05D008216 1.4e-10 68.9 57 59.6
SEGI_13182 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 1.4e-10 68.9 57 56.1
GSVIVG01030516001 Vitis vinifera HOM05D000172 ORTHO05D008216 1.4e-10 68.9 57 57.9
CANSAT78G2170 Cannabis sativa HOM05D000172 ORTHO05D000781 1.8e-10 68.6 57 61.4
Hma1.2p1_0405F.1_g145530 Hydrangea macrophylla HOM05D000172 ORTHO05D008216 1.8e-10 68.6 55 61.8
Potri.014G159600 Populus trichocarpa HOM05D000172 ORTHO05D008216 1.8e-10 68.6 39 79.5
Sabra14G0121300 Salix brachista HOM05D000172 ORTHO05D008216 1.8e-10 68.6 39 79.5
MBI16_g26181_MAGBIO Magnolia biondii HOM05D000172 ORTHO05D008216 2.4e-10 68.2 51 60.8
QL08p030202 Quercus lobata HOM05D000172 ORTHO05D008216 2.4e-10 68.2 58 60.3
QL93p0185_0050 Quercus lobata HOM05D000172 ORTHO05D008216 2.4e-10 68.2 58 60.3
CDE04G1581 Ceratophyllum demersum HOM05D000172 ORTHO05D008216 4.1e-10 67.4 43 65.1
SEGI_22849 Sequoiadendron giganteum HOM05D000172 ORTHO05D008216 4.1e-10 67.4 55 56.4
AUR62015120 Chenopodium quinoa HOM05D000172 ORTHO05D008216 6.9e-10 66.6 57 57.9
MELO3C019724.2 Cucumis melo HOM05D000172 ORTHO05D008216 6.9e-10 66.6 57 56.1
Sed0027341 Sechium edule HOM05D000172 ORTHO05D008216 9.1e-10 66.2 57 54.4
VMungo0647G0578 Vigna mungo HOM05D000172 ORTHO05D008216 9.1e-10 66.2 55 65.5
Psat2g026560 Pisum sativum HOM05D000172 ORTHO05D008216 1.5e-09 65.5 51 60.8
FvH4_6g41990 Fragaria vesca HOM05D000172 ORTHO05D008216 2.0e-09 65.1 54 64.8
FAN14G3302 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.0e-09 65.1 54 64.8
FAN14G3681 Fragaria x ananassa HOM05D000172 ORTHO05D008216 2.0e-09 65.1 54 64.8
MD09G1115500 Malus domestica HOM05D000172 ORTHO05D000781 2.0e-09 65.1 57 57.9
ATR1128G110 Amborella trichopoda HOM05D000172 ORTHO05D008216 3.4e-09 64.3 57 56.1
arahy.Tifrunner.gnm1.ann1.EDY71B Arachis hypogaea HOM05D000172 ORTHO05D008216 3.4e-09 64.3 56 57.1
Glyma.02G267200 Glycine max HOM05D000172 ORTHO05D008216 3.4e-09 64.3 46 67.4
Lalb_Chr17g0347191 Lupinus albus HOM05D000172 ORTHO05D008216 3.4e-09 64.3 46 58.7
LjContig00029g0008644 Lotus japonicus HOM05D000172 ORTHO05D008216 4.5e-09 63.9 57 54.4
Prupe.3G209000 Prunus persica HOM05D000172 ORTHO05D008216 4.5e-09 63.9 46 63.0
MD17G1107300 Malus domestica HOM05D000172 ORTHO05D008216 7.7e-09 63.2 57 56.1
Phvul.008G214900 Phaseolus vulgaris HOM05D000172 ORTHO05D008216 7.7e-09 63.2 55 63.6
FAN02G3472 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.0e-08 62.8 54 61.1
FAN09G4057 Fragaria x ananassa HOM05D000172 ORTHO05D000781 1.0e-08 62.8 54 61.1
Zm00001eb433230 Zea mays HOM05D000172 ORTHO05D008216 1.0e-08 62.8 48 56.2
AL1G14720 Arabidopsis lyrata HOM05D000172 ORTHO05D008216 1.3e-08 62.4 41 68.3
Carub.0001s0423 Capsella rubella HOM05D000172 ORTHO05D008216 1.3e-08 62.4 41 68.3
FAN05G3852 Fragaria x ananassa HOM05D000172 ORTHO05D008216 1.3e-08 62.4 54 61.1
Zm00001eb066900 Zea mays HOM05D000172 ORTHO05D008216 1.3e-08 62.4 48 56.2
HanXRQChr04g0126831 Helianthus annuus HOM05D000172 ORTHO05D008216 1.7e-08 62.0 51 54.9
RcHm_v2.0_Chr2g0157891 Rosa chinensis HOM05D000172 ORTHO05D008216 1.7e-08 62.0 59 54.2
Os04g0669100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D008216 2.2e-08 61.6 43 58.1
vmacro12154 Vaccinium macrocarpon HOM05D000172 ORTHO05D008216 2.2e-08 61.6 55 56.4
Rhsim06G0168800 Rhododendron simsii HOM05D000172 ORTHO05D008216 2.9e-08 61.2 55 54.5
Medtr5g084980 Medicago truncatula HOM05D000172 ORTHO05D008216 3.8e-08 60.8 56 57.1
TWI36G0853 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 6.5e-08 60.1 53 56.6
CARHR004400 Cardamine hirsuta HOM05D000172 ORTHO05D008216 1.1e-07 59.3 38 73.7
MSTRG.14128 Avicennia marina HOM05D000172 ORTHO05D008216 1.4e-07 58.9 43 58.1
Sp1g03860 Schrenkiella parvula HOM05D000172 ORTHO05D008216 1.4e-07 58.9 41 63.4
THA.LOC104826130 Tarenaya hassleriana HOM05D000172 ORTHO05D008216 1.4e-07 58.9 58 53.4
Thhalv10008833m.g Eutrema salsugineum HOM05D000172 ORTHO05D008216 1.9e-07 58.5 41 65.9
SalBow1G7277 Salvia bowleyana HOM05D000172 ORTHO05D008216 2.5e-07 58.2 55 54.5
SGA_v2.0_scaffold49G18358 Striga asiatica HOM05D000172 ORTHO05D008216 4.2e-07 57.4 43 60.5
Aa31LG1G19790 Aethionema arabicum HOM05D000172 ORTHO05D008216 7.2e-07 56.6 41 61.0
unitig_578.g16772 Utricularia gibba HOM05D000172 ORTHO05D008216 7.2e-07 56.6 43 60.5
HPP92_000210 Vanilla planifolia HOM05D000172 ORTHO05D008216 7.2e-07 56.6 43 60.5
HPP92_000219 Vanilla planifolia HOM05D000172 ORTHO05D008216 1.2e-06 55.8 43 60.5
TPR.G25655 Trifolium pratense HOM05D000172 ORTHO05D008216 1.6e-06 55.5 56 51.8
BcaB03g13463 Brassica carinata HOM05D000172 ORTHO05D008216 3.6e-06 54.3 41 63.4
BcaC07g36869 Brassica carinata HOM05D001534 ORTHO05D003503 4.7e-06 53.9 41 61.0
A08p36620 Brassica napus HOM05D001534 ORTHO05D003503 4.7e-06 53.9 41 61.0
C08p01620 Brassica napus HOM05D001534 ORTHO05D003503 4.7e-06 53.9 41 61.0
BolC8t46965H Brassica oleracea HOM05D001534 ORTHO05D003503 4.7e-06 53.9 41 61.0
BraA08t35564Z Brassica rapa HOM05D001534 ORTHO05D003503 4.7e-06 53.9 41 61.0
Migut.H01248 Erythranthe guttata HOM05D000172 ORTHO05D008216 6.1e-06 53.5 52 55.8


User provided reference genes

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