Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021126 Daucus carota HOM05D007417 ORTHO05D009328 1.2e-53 213.0 110 100.0
DCAR_019733 Daucus carota HOM05D007417 ORTHO05D009328 2.0e-21 105.9 73 72.6
GSVIVG01030389001 Vitis vinifera HOM05D007417 ORTHO05D009328 3.9e-17 91.7 80 65.0
QL08p029777 Quercus lobata HOM05D007417 ORTHO05D009328 2.5e-16 89.0 105 51.4
TAR724G0002 Trochodendron aralioides HOM05D007417 ORTHO05D009328 1.2e-15 86.7 111 52.3
CiPaw.03G275000 Carya illinoinensis HOM05D007417 ORTHO05D009328 3.6e-15 85.1 110 46.4
Haze_12734 Corylus avellana HOM05D007417 ORTHO05D009328 3.6e-15 85.1 71 69.0
Cfa014287 Carpinus fangiana HOM05D007417 ORTHO05D009328 6.2e-15 84.3 70 67.1
AUR62015101 Chenopodium quinoa HOM05D007417 ORTHO05D009328 6.2e-15 84.3 68 64.7
vmacro09376 Vaccinium macrocarpon HOM05D007417 ORTHO05D009328 6.2e-15 84.3 64 68.8
CSS0035036 Camellia sinensis var. sinensis HOM05D007417 ORTHO05D009328 1.1e-14 83.6 71 62.0
Rhsim04G0046300 Rhododendron simsii HOM05D007417 ORTHO05D009328 1.4e-14 83.2 68 64.7
ClCG02G002410 Citrullus lanatus HOM05D007417 ORTHO05D009328 3.1e-14 82.0 77 63.6
MD17G1109100 Malus domestica HOM05D007417 ORTHO05D009328 4.0e-14 81.6 70 64.3
TWI36G1211 Tripterygium wilfordii HOM05D007417 ORTHO05D009328 5.2e-14 81.3 114 48.2
CsaV3_7G003020 Cucumis sativus L. HOM05D007417 ORTHO05D009328 6.9e-14 80.9 77 62.3
MELO3C018873.2 Cucumis melo HOM05D007417 ORTHO05D009328 1.2e-13 80.1 77 62.3
Cpa.g.sc132.55 Carica papaya HOM05D007417 ORTHO05D009328 2.0e-13 79.3 81 56.8
Hma1.2p1_0133F.1_g060870 Hydrangea macrophylla HOM05D007417 ORTHO05D009328 2.0e-13 79.3 72 59.7
Nn1g07365 Nelumbo nucifera HOM05D007417 ORTHO05D009328 2.0e-13 79.3 110 47.3
TAR624G0780 Trochodendron aralioides HOM05D007417 ORTHO05D009328 2.0e-13 79.3 70 65.7
Atru.chr6.3304 Acer truncatum HOM05D007417 ORTHO05D009328 2.6e-13 79.0 66 65.2
Manes.13G064500 Manihot esculenta HOM05D007417 ORTHO05D009328 2.6e-13 79.0 73 61.6
Prupe.3G206100 Prunus persica HOM05D007417 ORTHO05D009328 7.6e-13 77.4 63 66.7
Sed0014894 Sechium edule HOM05D007417 ORTHO05D009328 7.6e-13 77.4 105 48.6
Potri.014G161000 Populus trichocarpa HOM05D007417 ORTHO05D009328 9.9e-13 77.0 108 48.1
Sabra14G0122700 Salix brachista HOM05D007417 ORTHO05D009328 1.7e-12 76.3 83 55.4
Aqoxy1G04099 Aquilegia oxysepala HOM05D007417 ORTHO05D009328 2.2e-12 75.9 105 45.7
COL.COLO4_05392 Corchorus olitorius HOM05D007417 ORTHO05D009328 2.9e-12 75.5 71 62.0
Actinidia10790 Actinidia chinensis HOM05D007417 ORTHO05D009328 3.8e-12 75.1 61 67.2
Thecc.01G187100 Theobroma cacao HOM05D007417 ORTHO05D009328 3.8e-12 75.1 70 57.1
Glyma.02G266000 Glycine max HOM05D007417 ORTHO05D009328 4.9e-12 74.7 68 63.2
Glyma.14G051500 Glycine max HOM05D007417 ORTHO05D009328 8.4e-12 73.9 80 55.0
MD09G1117800 Malus domestica HOM05D007417 ORTHO05D009328 8.4e-12 73.9 69 59.4
PSO210G7379 Papaver somniferum HOM05D007417 ORTHO05D009328 1.4e-11 73.2 120 46.7
Eucgr.A01081 Eucalyptus grandis HOM05D007417 ORTHO05D009328 3.2e-11 72.0 100 47.0
HanXRQChr16g0508291 Helianthus annuus HOM05D007417 ORTHO05D009328 3.2e-11 72.0 71 59.2
ECA236G4745 Erigeron canadensis HOM05D007417 ORTHO05D009328 5.4e-11 71.2 71 60.6
LjContig00029g0005574 Lotus japonicus HOM05D007417 ORTHO05D009328 5.4e-11 71.2 86 53.5
Ah.14g082980 Amaranthus hybridus HOM05D007417 ORTHO05D009328 1.2e-10 70.1 62 61.3
PSO302G0223 Papaver somniferum HOM05D007417 ORTHO05D009328 1.2e-10 70.1 121 43.8
RcHm_v2.0_Chr2g0157401 Rosa chinensis HOM05D007417 ORTHO05D009328 1.2e-10 70.1 69 58.0
arahy.Tifrunner.gnm1.ann1.31J2YT Arachis hypogaea HOM05D007417 ORTHO05D009328 1.6e-10 69.7 71 59.2
arahy.Tifrunner.gnm1.ann1.GTS6TM Arachis hypogaea HOM05D007417 ORTHO05D009328 1.6e-10 69.7 71 59.2
Lsat_1_v5_gn_7_94580 Lactuca sativa HOM05D007417 ORTHO05D009328 2.1e-10 69.3 67 64.2
Gorai.007G168800 Gossypium raimondii HOM05D007417 ORTHO05D009328 3.5e-10 68.6 72 58.3
Lalb_Chr04g0250231 Lupinus albus HOM05D007417 ORTHO05D009328 3.5e-10 68.6 71 57.7
Ciclev10015618m.g Citrus clementina HOM05D007417 ORTHO05D009328 4.6e-10 68.2 71 57.7
FvH4_6g41680 Fragaria vesca HOM05D007417 ORTHO05D009328 1.3e-09 66.6 69 55.1
FAN14G4805 Fragaria x ananassa HOM05D007417 ORTHO05D009328 1.3e-09 66.6 69 55.1
Psat2g027080 Pisum sativum HOM05D007417 ORTHO05D009328 1.3e-09 66.6 81 48.1
ATR1101G071 Amborella trichopoda HOM05D007417 ORTHO05D009328 1.7e-09 66.2 82 46.3
FAN05G3790 Fragaria x ananassa HOM05D007417 ORTHO05D009328 1.7e-09 66.2 69 55.1
Gohir.A11G151400 Gossypium hirsutum HOM05D007417 ORTHO05D009328 1.7e-09 66.2 72 56.9
Gohir.D11G158350 Gossypium hirsutum HOM05D007417 ORTHO05D009328 1.7e-09 66.2 72 56.9
arahy.Tifrunner.gnm1.ann1.THB5IJ Arachis hypogaea HOM05D007417 ORTHO05D009328 3.0e-09 65.5 71 57.7
Duzib133G1181 Durio zibethinus HOM05D007417 ORTHO05D009328 3.0e-09 65.5 83 51.8
FAN09G4159 Fragaria x ananassa HOM05D007417 ORTHO05D009328 3.0e-09 65.5 69 53.6
TPR.G17690 Trifolium pratense HOM05D007417 ORTHO05D009328 3.0e-09 65.5 82 46.3
Duzib211G0474 Durio zibethinus HOM05D007417 ORTHO05D009328 5.1e-09 64.7 83 49.4
SalBow6G1441 Salvia bowleyana HOM05D007417 ORTHO05D009328 8.7e-09 63.9 73 52.1
Lalb_Chr17g0347101 Lupinus albus HOM05D007417 ORTHO05D009328 1.1e-08 63.5 91 46.2
CANSAT64G0801 Cannabis sativa HOM05D007417 ORTHO05D009328 1.5e-08 63.2 76 51.3
PGR042G2075 Punica granatum HOM05D007417 ORTHO05D009328 1.9e-08 62.8 73 54.8
Thhalv10004244m.g Eutrema salsugineum HOM05D007417 ORTHO05D009328 5.6e-08 61.2 73 46.6
AL7G44510 Arabidopsis lyrata HOM05D007417 ORTHO05D009328 7.3e-08 60.8 65 50.8
THA.LOC104808870 Tarenaya hassleriana HOM05D007417 ORTHO05D009328 1.3e-07 60.1 56 53.6
BcaC07g37652 Brassica carinata HOM05D007417 ORTHO05D009328 1.6e-07 59.7 64 50.0
BolC8t48025H Brassica oleracea HOM05D007417 ORTHO05D009328 1.6e-07 59.7 64 50.0
A08p09870 Brassica napus HOM05D007417 ORTHO05D009328 3.6e-07 58.5 64 48.4
BraA08t32981Z Brassica rapa HOM05D007417 ORTHO05D009328 3.6e-07 58.5 64 48.4
AT5G35670 Arabidopsis thaliana HOM05D007417 ORTHO05D009328 4.8e-07 58.2 76 43.4
Medtr5g084680 Medicago truncatula HOM05D007417 ORTHO05D009328 6.2e-07 57.8 82 43.9
BcaB04g18020 Brassica carinata HOM05D007417 ORTHO05D009328 1.4e-06 56.6 63 47.6
Sp7g06610 Schrenkiella parvula HOM05D007417 ORTHO05D009328 2.4e-06 55.8 74 44.6
EL10Ac9g22784 Beta vulgaris HOM05D007417 ORTHO05D009328 4.0e-06 55.1 45 66.7
CARHR217050 Cardamine hirsuta HOM05D007417 ORTHO05D009328 5.3e-06 54.7 66 45.5
Nn1g03324 Nelumbo nucifera HOM05D007417 ORTHO05D009328 5.3e-06 54.7 49 67.3
Oeu015937.1 Olea europaea HOM05D007417 ORTHO05D009328 5.3e-06 54.7 59 49.2


User provided reference genes

Program Settings