Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 4.8e-128 461.1 218 100.0
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 4.3e-92 341.7 214 78.0
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 1.2e-91 340.1 215 71.6
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.6e-91 339.7 218 74.8
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 2.3e-90 335.9 212 76.9
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 6.8e-90 334.3 224 70.5
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 8.9e-90 334.0 215 72.1
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 2.0e-89 332.8 219 73.5
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 4.1e-87 325.1 208 73.1
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 9.2e-87 323.9 208 74.0
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 1.2e-86 323.6 211 73.0
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 1.2e-86 323.6 202 73.8
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 2.1e-86 322.8 217 71.4
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 2.1e-86 322.8 208 74.0
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 2.7e-86 322.4 209 74.6
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 1.0e-85 320.5 174 83.3
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.3e-85 320.1 186 79.6
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.3e-85 320.1 208 73.6
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 1.7e-85 319.7 176 81.8
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 2.3e-85 319.3 215 72.6
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 2.3e-85 319.3 216 71.8
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.1e-85 318.2 216 71.3
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.1e-85 318.2 216 71.3
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 1.5e-84 316.6 215 71.6
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 1.5e-84 316.6 221 69.7
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 3.3e-84 315.5 230 66.5
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 3.3e-84 315.5 230 68.3
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 3.3e-84 315.5 223 68.6
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 4.3e-84 315.1 207 72.0
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 4.3e-84 315.1 187 77.0
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 5.6e-84 314.7 208 72.1
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 7.3e-84 314.3 173 83.8
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 7.3e-84 314.3 171 81.3
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 9.5e-84 313.9 205 72.7
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 1.2e-83 313.5 175 84.6
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 1.6e-83 313.2 229 65.9
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 2.1e-83 312.8 174 83.3
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.8e-83 312.4 216 69.9
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 2.8e-83 312.4 206 73.3
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 3.6e-83 312.0 222 69.4
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 4.7e-83 311.6 191 75.4
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 6.2e-83 311.2 167 84.4
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 8.1e-83 310.8 221 67.4
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 8.1e-83 310.8 172 83.1
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.1e-82 310.5 175 81.1
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 1.4e-82 310.1 178 81.5
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 3.1e-82 308.9 220 68.6
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 4.0e-82 308.5 196 75.5
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 5.2e-82 308.1 165 84.2
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 5.2e-82 308.1 173 83.2
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 6.8e-82 307.8 170 81.8
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 6.8e-82 307.8 183 78.7
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 6.8e-82 307.8 227 67.8
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 1.5e-81 306.6 178 79.2
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 1.5e-81 306.6 198 76.8
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 2.6e-81 305.8 167 82.6
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 3.4e-81 305.4 226 67.7
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.3e-80 303.5 210 70.0
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 2.2e-80 302.8 219 66.7
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 3.8e-80 302.0 163 85.9
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 3.8e-80 302.0 166 84.9
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 4.9e-80 301.6 213 68.1
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 4.9e-80 301.6 163 85.3
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 1.4e-79 300.1 218 68.3
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.9e-79 299.7 196 73.5
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 3.2e-79 298.9 220 67.3
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 5.4e-79 298.1 174 78.7
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 1.6e-78 296.6 203 72.4
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 1.6e-78 296.6 183 76.5
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 2.7e-78 295.8 164 83.5
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 7.8e-78 294.3 220 66.4
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 1.7e-77 293.1 169 79.3
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 1.1e-76 290.4 162 80.9
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 2.5e-76 289.3 169 78.1
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 7.3e-76 287.7 191 71.7
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 9.6e-76 287.3 169 77.5
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 1.2e-75 287.0 181 74.0
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 1.2e-75 287.0 166 78.3
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 1.6e-75 286.6 173 76.3
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 1.6e-75 286.6 173 76.3
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 2.1e-75 286.2 178 74.7
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 2.8e-75 285.8 171 78.9
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 3.6e-75 285.4 173 76.3
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 3.6e-75 285.4 173 76.3
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 3.6e-75 285.4 173 75.7
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 3.6e-75 285.4 173 76.3
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 6.2e-75 284.6 175 74.9
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 2.4e-74 282.7 200 69.5
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 3.1e-74 282.3 196 71.4
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 5.8e-73 278.1 173 76.9
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 7.6e-73 277.7 148 85.8
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 1.7e-72 276.6 153 79.1
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 8.7e-69 264.2 170 74.7
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 1.1e-66 257.3 167 73.7
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 6.4e-64 248.1 128 87.5
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 4.6e-62 241.9 161 67.1
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 7.4e-60 234.6 153 69.3
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.2e-56 223.0 216 55.6
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 2.9e-56 222.6 129 77.5
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 4.9e-56 221.9 155 62.6
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 3.2e-55 219.2 141 75.2
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 1.4e-50 203.8 110 84.5
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 4.9e-48 195.3 122 71.3
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 9.0e-42 174.5 130 61.5
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 7.2e-39 164.9 173 52.0
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 1.1e-31 141.0 88 75.0
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 6.1e-30 135.2 160 43.1
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 7.2e-23 111.7 179 38.5
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 7.2e-15 85.1 42 88.1
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 6.3e-11 72.0 40 77.5
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 3.6e-06 56.2 71 42.3


User provided reference genes

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