Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 6.8e-60 233.8 119 100.0
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 1.7e-34 149.4 122 65.6
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 1.1e-33 146.7 119 62.2
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 1.4e-33 146.4 122 63.9
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 3.2e-33 145.2 119 61.3
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 5.5e-33 144.4 120 63.3
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.6e-32 142.9 123 65.9
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.6e-32 142.9 123 65.9
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 2.1e-32 142.5 119 59.7
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 2.7e-32 142.1 124 63.7
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 2.7e-32 142.1 121 64.5
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 7.9e-32 140.6 119 63.9
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 7.9e-32 140.6 122 59.8
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.0e-31 140.2 123 65.0
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.3e-31 139.8 117 62.4
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 2.3e-31 139.0 120 65.0
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 2.3e-31 139.0 128 57.8
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 5.1e-31 137.9 120 60.8
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 8.7e-31 137.1 119 62.2
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.1e-30 136.7 119 60.5
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 1.1e-30 136.7 123 62.6
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 1.9e-30 136.0 119 62.2
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.9e-30 136.0 119 62.2
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 1.9e-30 136.0 119 62.2
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 1.9e-30 136.0 120 62.5
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 1.9e-30 136.0 121 61.2
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.5e-30 135.6 119 62.2
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 2.5e-30 135.6 120 61.7
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 2.5e-30 135.6 119 63.0
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 3.3e-30 135.2 120 60.0
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 3.3e-30 135.2 123 61.0
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 4.3e-30 134.8 118 59.3
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 4.3e-30 134.8 130 57.7
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 4.3e-30 134.8 122 60.7
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 5.7e-30 134.4 119 63.9
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 5.7e-30 134.4 120 57.5
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 7.4e-30 134.0 125 58.4
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 9.6e-30 133.7 114 60.5
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 9.6e-30 133.7 126 58.7
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 1.3e-29 133.3 115 60.0
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 2.8e-29 132.1 122 58.2
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 2.8e-29 132.1 123 57.7
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 3.7e-29 131.7 125 59.2
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 3.7e-29 131.7 125 59.2
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 4.8e-29 131.3 129 56.6
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 6.2e-29 131.0 103 64.1
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 6.2e-29 131.0 125 58.4
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.1e-28 130.2 121 61.2
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 1.4e-28 129.8 120 59.2
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 2.4e-28 129.0 123 57.7
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 3.1e-28 128.6 125 60.0
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 6.9e-28 127.5 123 56.1
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 6.9e-28 127.5 125 57.6
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 6.9e-28 127.5 120 62.5
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 6.9e-28 127.5 121 58.7
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 9.0e-28 127.1 104 64.4
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 9.0e-28 127.1 126 56.3
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 1.2e-27 126.7 127 55.1
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 1.5e-27 126.3 116 59.5
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 1.5e-27 126.3 131 56.5
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.5e-27 126.3 115 57.4
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 2.0e-27 125.9 82 74.4
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 2.0e-27 125.9 122 58.2
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 2.6e-27 125.6 122 57.4
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 3.4e-27 125.2 120 57.5
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 4.5e-27 124.8 123 56.1
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 7.6e-27 124.0 127 57.5
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 7.6e-27 124.0 120 56.7
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 7.6e-27 124.0 112 58.0
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.0e-26 123.6 82 73.2
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 1.0e-26 123.6 119 58.0
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 1.3e-26 123.2 122 54.1
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.3e-26 123.2 121 58.7
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.7e-26 122.9 105 59.0
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 1.7e-26 122.9 100 69.0
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 5.0e-26 121.3 72 79.2
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 1.4e-25 119.8 116 58.6
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 1.4e-25 119.8 119 57.1
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 1.4e-25 119.8 163 44.2
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 1.9e-25 119.4 75 74.7
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.9e-25 119.4 83 73.5
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 1.2e-24 116.7 74 78.4
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 2.1e-24 115.9 78 70.5
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 6.1e-24 114.4 127 54.3
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 7.9e-24 114.0 124 51.6
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 1.0e-23 113.6 72 73.6
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 1.8e-23 112.8 124 51.6
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 6.7e-23 110.9 69 73.9
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 6.7e-23 110.9 119 52.9
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 4.8e-21 104.8 54 88.9
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 3.1e-20 102.1 70 62.9
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 5.9e-19 97.8 133 45.1
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 7.7e-19 97.4 107 51.4
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 2.9e-18 95.5 48 85.4
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 3.8e-18 95.1 49 85.7
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 8.8e-15 84.0 120 45.0
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 1.3e-13 80.1 52 67.3
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 6.7e-07 57.8 98 36.7


User provided reference genes

Program Settings