Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 5.2e-301 1036.9 530 100.0
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 5.2e-301 1036.9 530 100.0
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 7.3e-162 574.7 540 55.6
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 3.1e-160 569.3 537 56.2
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 1.4e-157 560.5 524 57.8
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 6.6e-155 551.6 548 54.9
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 9.5e-154 547.7 492 56.7
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 2.1e-153 546.6 545 53.8
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 3.6e-153 545.8 546 54.9
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 8.1e-153 544.7 527 55.8
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 1.3e-150 537.3 572 52.6
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.1e-149 534.3 571 52.2
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 2.1e-148 530.0 557 52.4
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 4.3e-146 522.3 547 52.7
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 2.1e-145 520.0 546 52.2
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 2.8e-145 519.6 546 52.6
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.8e-145 519.6 553 51.9
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 8.9e-144 514.6 550 52.5
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 3.4e-143 512.7 551 50.5
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 3.4e-143 512.7 509 53.4
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 2.2e-142 510.0 555 50.3
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 2.9e-142 509.6 531 53.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 6.4e-142 508.4 549 49.9
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 1.2e-140 504.2 540 52.0
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 2.7e-140 503.1 559 53.3
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 2.7e-140 503.1 554 50.5
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 1.0e-139 501.1 536 53.0
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 1.7e-139 500.4 554 49.8
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.5e-138 497.3 539 50.5
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 3.3e-138 496.1 502 53.2
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 1.8e-136 490.3 529 52.4
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 4.5e-135 485.7 540 50.9
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 9.9e-135 484.6 574 49.7
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 4.9e-134 482.3 547 50.8
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 6.4e-134 481.9 545 51.7
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 1.1e-133 481.1 547 50.6
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 1.4e-133 480.7 533 51.2
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 1.9e-133 480.3 529 49.9
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 6.0e-132 475.3 510 52.7
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 6.0e-132 475.3 572 49.0
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 3.0e-131 473.0 564 49.6
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 5.6e-130 468.8 541 49.4
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 1.8e-128 463.8 550 49.5
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 1.8e-128 463.8 543 49.7
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 2.4e-128 463.4 491 54.4
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 6.9e-128 461.8 554 49.8
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 6.9e-128 461.8 550 49.3
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 1.5e-127 460.7 530 49.4
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 1.5e-127 460.7 530 49.4
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.0e-127 460.3 454 54.8
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 2.6e-127 459.9 531 49.0
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 3.4e-127 459.5 540 48.1
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 7.6e-127 458.4 524 49.6
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.9e-126 456.4 540 49.3
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 2.4e-125 453.4 544 47.4
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 2.4e-125 453.4 536 49.3
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 3.2e-125 453.0 563 48.1
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 3.2e-125 453.0 549 48.5
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 9.3e-125 451.4 532 48.9
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 1.6e-124 450.7 496 50.6
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 2.7e-124 449.9 527 48.2
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 3.3e-122 443.0 542 47.2
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 2.8e-121 439.9 567 45.3
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 1.0e-118 431.4 538 46.8
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 7.1e-117 425.2 453 51.0
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 1.5e-111 407.5 521 45.5
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.3e-110 404.4 561 44.9
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 2.5e-109 400.2 528 46.0
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 6.7e-107 392.1 377 56.5
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 2.9e-102 376.7 560 42.3
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 2.7e-100 370.2 553 40.1
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 6.5e-94 349.0 377 52.8
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 1.9e-93 347.4 296 64.2
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 4.8e-89 332.8 553 37.1
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 4.8e-89 332.8 374 50.8
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 1.7e-86 324.3 358 48.3
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.7e-86 324.3 363 51.2
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 4.2e-85 319.7 531 40.9
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 3.1e-80 303.5 489 38.0
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 7.7e-79 298.9 553 35.4
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.2e-76 291.6 373 47.7
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 5.2e-75 286.2 545 35.0
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 3.4e-74 283.5 361 48.5
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 8.3e-57 225.7 581 29.4
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 7.6e-34 149.4 159 47.8
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.7e-33 148.3 183 44.3
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 2.9e-33 147.5 181 45.9
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 7.8e-23 112.8 122 49.2
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 2.1e-20 104.8 121 47.1
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 1.3e-14 85.5 118 40.7
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.1e-08 65.9 68 47.1


User provided reference genes

Program Settings