Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 0.0e+00 1195.3 612 100.0
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 3.2e-222 775.4 621 64.4
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 2.0e-219 766.1 615 65.2
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 7.7e-216 754.2 616 63.0
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 5.0e-215 751.5 640 61.2
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 1.9e-214 749.6 615 62.0
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.1e-213 746.1 626 61.2
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 8.9e-212 740.7 603 65.5
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 5.7e-211 738.0 612 60.3
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.4e-209 733.4 617 62.6
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 4.1e-209 731.9 611 62.0
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 7.0e-209 731.1 585 63.8
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 2.7e-208 729.2 614 60.6
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.5e-206 722.6 615 63.6
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 1.5e-203 713.4 618 59.4
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 9.8e-203 710.7 593 65.8
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 1.3e-202 710.3 617 62.9
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 2.2e-202 709.5 617 58.8
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 4.9e-202 708.4 630 62.1
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 2.4e-201 706.1 622 59.6
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 4.1e-201 705.3 617 61.4
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 7.0e-201 704.5 625 57.3
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.2e-200 703.7 622 58.0
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.6e-200 703.4 630 58.9
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 4.6e-200 701.8 624 61.1
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.0e-199 700.7 612 62.4
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 1.0e-199 700.7 619 60.7
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 6.6e-199 698.0 616 58.6
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 2.5e-198 696.0 623 58.3
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 2.5e-198 696.0 615 58.9
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 3.3e-198 695.7 615 59.0
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 9.5e-198 694.1 617 61.1
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 9.5e-198 694.1 615 58.9
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 2.1e-197 693.0 546 66.3
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.6e-197 692.2 585 64.4
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 3.6e-197 692.2 641 58.2
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 4.7e-197 691.8 619 58.3
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 6.2e-197 691.4 616 60.6
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.1e-196 690.6 634 57.7
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.8e-196 689.9 548 66.2
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 2.3e-196 689.5 610 58.4
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 1.2e-195 687.2 597 59.5
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 2.6e-195 686.0 568 64.1
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 5.8e-195 684.9 632 58.4
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.3e-194 683.7 624 57.9
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 2.2e-194 682.9 579 61.0
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 2.2e-194 682.9 630 58.3
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 2.9e-194 682.6 606 59.2
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 3.7e-194 682.2 605 59.8
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 8.3e-194 681.0 574 62.0
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 1.4e-193 680.2 601 59.7
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 2.4e-193 679.5 641 57.9
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 2.4e-193 679.5 601 59.7
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 4.1e-193 678.7 541 63.2
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.1e-193 677.9 620 56.1
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 1.6e-192 676.8 641 57.4
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 2.1e-192 676.4 622 56.3
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.1e-192 676.4 620 56.0
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 3.5e-192 675.6 623 58.1
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 4.6e-192 675.2 630 60.0
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 7.8e-192 674.5 635 56.4
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 7.8e-192 674.5 635 56.4
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.0e-191 674.1 636 56.8
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 1.0e-191 674.1 623 57.9
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 3.9e-191 672.2 607 58.2
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 8.6e-191 671.0 560 62.5
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 8.6e-191 671.0 630 58.3
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 1.5e-190 670.2 623 57.8
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 2.5e-190 669.5 638 59.4
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.2e-189 667.2 542 61.3
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.6e-189 666.8 626 55.4
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 3.6e-189 665.6 622 57.6
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 6.8e-188 661.4 622 57.6
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 5.8e-187 658.3 523 65.2
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 2.2e-186 656.4 634 57.3
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 8.4e-186 654.4 629 57.4
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 2.4e-185 652.9 641 55.2
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 3.2e-185 652.5 557 59.4
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 4.1e-185 652.1 626 58.5
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.7e-184 649.4 624 57.2
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 2.5e-182 642.9 570 58.8
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 1.2e-181 640.6 623 56.8
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 8.1e-181 637.9 623 57.8
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 1.1e-180 637.5 621 54.3
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 3.4e-179 632.5 553 58.2
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 3.8e-178 629.0 558 59.5
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 3.5e-176 622.5 621 54.4
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.0e-167 594.3 473 62.8
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.1e-166 590.9 487 61.2
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 1.3e-165 587.4 621 51.9
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.3e-159 567.4 605 50.7
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 3.0e-159 566.2 556 54.7
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 2.0e-155 553.5 587 47.9
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.2e-152 544.3 438 61.9
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 6.7e-151 538.5 631 48.7
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 2.4e-148 530.0 352 67.0
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 2.7e-144 516.5 569 51.0
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 3.2e-137 493.0 613 47.0
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 2.1e-136 490.3 545 50.5
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.3e-125 454.5 424 59.9
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 3.8e-98 363.2 359 56.3
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 2.3e-95 354.0 341 54.8
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 1.7e-82 311.2 536 36.9
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 4.9e-45 186.8 272 38.2
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 3.2e-44 184.1 555 29.9
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 6.7e-42 176.4 457 30.6
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 4.8e-40 170.2 479 31.9
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 6.9e-39 166.4 240 33.3
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 2.3e-34 151.4 144 54.9
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 7.4e-33 146.4 90 72.2
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.5e-25 122.1 83 71.1
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 4.3e-25 120.6 83 69.9
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.0e-22 111.7 142 48.6
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 6.5e-21 106.7 77 63.6
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 2.7e-19 101.3 232 27.2
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 6.1e-19 100.1 58 70.7
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.6e-17 94.7 80 60.0


User provided reference genes

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