Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020999 Daucus carota HOM05D008621 ORTHO05D010242 1.4e-151 539.7 290 100.0
Hma1.2p1_0313F.1_g121690 Hydrangea macrophylla HOM05D010484 ORTHO05D001329 4.1e-26 122.9 299 37.8
Actinidia35237 Actinidia chinensis HOM05D001501 ORTHO05D001329 1.8e-21 107.5 297 35.7
Dinv20212 Davidia involucrata HOM05D001501 ORTHO05D001329 6.9e-21 105.5 222 41.0
Glyma.12G227100 Glycine max HOM05D001501 ORTHO05D001329 2.2e-19 100.5 305 33.8
Glyma.13G273200 Glycine max HOM05D001501 ORTHO05D001329 2.4e-18 97.1 308 33.4
Phvul.005G069500 Phaseolus vulgaris HOM05D001501 ORTHO05D001329 9.3e-18 95.1 310 33.2
CSS0041099 Camellia sinensis var. sinensis HOM05D001501 ORTHO05D001329 2.7e-17 93.6 200 38.0
Medtr2g078620 Medicago truncatula HOM05D001501 ORTHO05D001329 3.5e-17 93.2 306 33.7
MSTRG.12891 Avicennia marina HOM05D010484 ORTHO05D001329 6.0e-17 92.4 303 32.3
TPR.G17529 Trifolium pratense HOM05D001501 ORTHO05D001329 5.1e-16 89.4 307 32.6
Prupe.4G173500 Prunus persica HOM05D001501 ORTHO05D001329 8.7e-16 88.6 317 32.2
VMungo1080G0146 Vigna mungo HOM05D001501 ORTHO05D001329 8.7e-16 88.6 311 31.8
Migut.H01963 Erythranthe guttata HOM05D010484 ORTHO05D010242 1.9e-15 87.4 301 34.2
DCAR_017119 Daucus carota HOM05D010484 ORTHO05D010242 3.3e-15 86.7 291 34.7
Ciclev10010201m.g Citrus clementina HOM05D008621 ORTHO05D001329 4.3e-15 86.3 326 31.9
Nn1g04269 Nelumbo nucifera HOM05D001501 ORTHO05D001329 7.3e-15 85.5 215 39.5
Psat5g241480 Pisum sativum HOM05D001501 ORTHO05D001329 7.3e-15 85.5 298 32.6
Ca_03534_v3 Cicer arietinum L. HOM05D005433 ORTHO05D006675 1.3e-14 84.7 292 33.6
Atru.chr2.2385 Acer truncatum HOM05D008621 ORTHO05D010242 1.1e-13 81.6 332 33.1
TAR626G1090 Trochodendron aralioides HOM05D001501 ORTHO05D001329 1.4e-13 81.3 207 36.2
Eucgr.F03292 Eucalyptus grandis HOM05D001501 ORTHO05D001329 2.4e-13 80.5 206 37.9
Oeu051092.1 Olea europaea HOM05D010484 ORTHO05D010242 3.1e-13 80.1 295 31.5
Manes.15G090300 Manihot esculenta HOM05D008621 ORTHO05D010242 5.3e-13 79.3 322 33.2
CANSAT35G0828 Cannabis sativa HOM05D001501 ORTHO05D001329 1.5e-12 77.8 309 29.8
FAN25G3082 Fragaria x ananassa HOM05D001501 ORTHO05D001329 2.6e-12 77.0 302 30.1
Oeu025352.2 Olea europaea HOM05D001501 ORTHO05D001329 7.6e-12 75.5 186 33.3
Duzib213G0990 Durio zibethinus HOM05D001501 ORTHO05D001329 2.9e-11 73.6 312 30.8
vmacro09518 Vaccinium macrocarpon HOM05D000070 ORTHO05D006683 2.9e-11 73.6 202 35.1
Cpa.g.sc80.10 Carica papaya HOM05D008621 ORTHO05D010242 3.8e-11 73.2 315 31.1
FvH4_3g19190 Fragaria vesca HOM05D001501 ORTHO05D001329 4.9e-11 72.8 300 29.3
FAN11G0392 Fragaria x ananassa HOM05D001501 ORTHO05D001329 4.9e-11 72.8 300 29.0
Lalb_Chr20g0109461 Lupinus albus HOM05D001501 ORTHO05D001329 4.9e-11 72.8 288 31.2
Thecc.07G099300 Theobroma cacao HOM05D001501 ORTHO05D001329 6.4e-11 72.4 320 31.6
FAN16G1511 Fragaria x ananassa HOM05D001501 ORTHO05D001329 1.1e-10 71.6 302 28.8
SGA_v2.0_scaffold130G34346 Striga asiatica HOM05D010484 ORTHO05D001329 1.1e-10 71.6 308 29.5
Cc05_g11620 Coffea canephora HOM05D010484 ORTHO05D010242 2.4e-10 70.5 301 30.9
CsaV3_3G019560 Cucumis sativus L. HOM05D001501 ORTHO05D001329 2.4e-10 70.5 244 29.9
Lj3g0018355 Lotus japonicus HOM05D001501 ORTHO05D001329 3.2e-10 70.1 223 33.6
MD03G1235500 Malus domestica HOM05D001501 ORTHO05D001329 4.2e-10 69.7 320 30.9
PSO675G3629 Papaver somniferum HOM05D001501 ORTHO05D001329 9.3e-10 68.6 242 33.9
GSVIVG01014264001 Vitis vinifera HOM05D001501 ORTHO05D001329 9.3e-10 68.6 193 34.2
CARHR090090 Cardamine hirsuta HOM05D008621 ORTHO05D010242 1.2e-09 68.2 200 36.5
FAN21G4066 Fragaria x ananassa HOM05D001501 ORTHO05D001329 1.2e-09 68.2 300 28.7
Gohir.A01G060500 Gossypium hirsutum HOM05D001501 ORTHO05D001329 1.2e-09 68.2 318 28.3
SGA_v2.0_scaffold70G23695 Striga asiatica HOM05D010484 ORTHO05D010242 1.2e-09 68.2 200 34.0
Gohir.D01G047000 Gossypium hirsutum HOM05D001501 ORTHO05D001329 2.7e-09 67.0 311 28.9
Manes.03G104500 Manihot esculenta HOM05D008621 ORTHO05D010242 3.5e-09 66.6 308 29.2
Thhalv10021100m.g Eutrema salsugineum HOM05D008621 ORTHO05D010242 6.0e-09 65.9 319 29.2
Gorai.002G066500 Gossypium raimondii HOM05D001501 ORTHO05D001329 6.0e-09 65.9 313 27.5
A01p38850 Brassica napus HOM05D008621 ORTHO05D010242 1.0e-08 65.1 197 35.0
Carub.0003s1476 Capsella rubella HOM05D008621 ORTHO05D010242 1.0e-08 65.1 198 36.4
PGR031G3944 Punica granatum HOM05D001501 ORTHO05D001329 1.3e-08 64.7 199 34.2
BcaB04g20947 Brassica carinata HOM05D008621 ORTHO05D010242 1.8e-08 64.3 202 34.2
QL08p023599 Quercus lobata HOM05D001501 ORTHO05D001329 1.8e-08 64.3 328 28.0
BcaB06g29537 Brassica carinata HOM05D008621 ORTHO05D010242 2.3e-08 63.9 202 33.7
C05p52100 Brassica napus HOM05D008621 ORTHO05D010242 2.3e-08 63.9 202 33.7
ECA234G3280 Erigeron canadensis HOM05D016023 ORTHO05D010242 2.3e-08 63.9 280 28.9
arahy.Tifrunner.gnm1.ann1.B8RZEA Arachis hypogaea HOM05D001501 ORTHO05D001329 3.0e-08 63.5 244 30.7
BcaC09g48475 Brassica carinata HOM05D008621 ORTHO05D010242 3.0e-08 63.5 205 33.2
BolC1t04897H Brassica oleracea HOM05D008621 ORTHO05D010242 3.0e-08 63.5 205 33.2
ClCG05G009220 Citrullus lanatus HOM05D001501 ORTHO05D001329 5.1e-08 62.8 244 28.3
C01p49400 Brassica napus HOM05D008621 ORTHO05D010242 6.7e-08 62.4 205 33.2
PSO541G6205 Papaver somniferum HOM05D001501 ORTHO05D001329 6.7e-08 62.4 287 30.3
arahy.Tifrunner.gnm1.ann1.14Q3ET Arachis hypogaea HOM05D001501 ORTHO05D001329 1.1e-07 61.6 244 30.3
Cfa020621 Carpinus fangiana HOM05D001501 ORTHO05D001329 1.1e-07 61.6 145 37.9
Haze_09384 Corylus avellana HOM05D001501 ORTHO05D001329 1.1e-07 61.6 291 28.9
Rhsim04G0022900 Rhododendron simsii HOM05D010484 ORTHO05D010242 1.5e-07 61.2 296 28.7
RcHm_v2.0_Chr5g0032271 Rosa chinensis HOM05D001501 ORTHO05D001329 1.5e-07 61.2 302 28.5
MD11G1256500 Malus domestica HOM05D001501 ORTHO05D001329 1.9e-07 60.8 312 28.8
TWI38G1368 Tripterygium wilfordii HOM05D001501 ORTHO05D001329 2.5e-07 60.5 295 29.5
Potri.001G372800 Populus trichocarpa HOM05D008621 ORTHO05D010242 4.3e-07 59.7 260 28.1
Sed0013458 Sechium edule HOM05D001501 ORTHO05D001329 4.3e-07 59.7 202 30.2
BraA01t03931Z Brassica rapa HOM05D008621 ORTHO05D010242 5.6e-07 59.3 193 34.2
BolC5t33895H Brassica oleracea HOM05D008621 ORTHO05D010242 7.4e-07 58.9 201 34.3
ECA240G0649 Erigeron canadensis HOM05D016023 ORTHO05D010242 7.4e-07 58.9 200 30.0
AT3G15115 Arabidopsis thaliana HOM05D008621 ORTHO05D010242 9.6e-07 58.5 201 33.3
Actinidia18779 Actinidia chinensis HOM05D010484 ORTHO05D001329 1.3e-06 58.2 312 28.2
BraA05t22253Z Brassica rapa HOM05D008621 ORTHO05D010242 1.3e-06 58.2 202 34.7
SGA_v2.0_scaffold34G13793 Striga asiatica HOM05D010484 ORTHO05D010242 1.6e-06 57.8 204 28.4
HanXRQChr10g0302501 Helianthus annuus HOM05D016023 ORTHO05D010242 2.8e-06 57.0 299 28.4
Nitab4.5_0000246g0060 Nicotiana tabacum HOM05D010484 ORTHO05D010242 2.8e-06 57.0 314 27.4
AL3G27470 Arabidopsis lyrata HOM05D008621 ORTHO05D010242 3.7e-06 56.6 203 34.0
SalBow7G1441 Salvia bowleyana HOM05D010484 ORTHO05D010242 4.8e-06 56.2 284 26.4
MSTRG.15244 Avicennia marina HOM05D010484 ORTHO05D010242 6.2e-06 55.8 245 31.0
Sc16g0007300 Simmondsia chinensis HOM05D001501 ORTHO05D001329 6.2e-06 55.8 152 34.9
Solyc07g062740.4 Solanum lycopersicum HOM05D010484 ORTHO05D010242 6.2e-06 55.8 201 28.4
Sopen07g030970 Solanum pennellii HOM05D010484 ORTHO05D010242 8.1e-06 55.5 201 28.4


User provided reference genes

Program Settings