Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020977 Daucus carota HOM05D006278 ORTHO05D007526 1.5e-227 792.7 479 100.0
DCAR_019537 Daucus carota HOM05D006278 ORTHO05D007526 2.7e-30 137.5 520 32.3
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 3.8e-16 90.5 324 30.2
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 8.4e-16 89.4 310 30.0
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 2.4e-15 87.8 276 33.3
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 6.0e-14 83.2 228 32.9
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 1.0e-13 82.4 518 29.9
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 3.0e-13 80.9 432 24.5
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 5.1e-13 80.1 144 36.1
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 6.7e-13 79.7 311 29.3
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 6.7e-13 79.7 192 31.8
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 1.1e-12 79.0 264 29.5
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 1.9e-12 78.2 364 27.5
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 4.3e-12 77.0 174 32.8
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 5.6e-12 76.6 252 32.1
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 2.8e-11 74.3 216 29.6
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 8.1e-11 72.8 277 30.0
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 1.4e-10 72.0 351 27.9
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 1.8e-10 71.6 221 29.0
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 3.1e-10 70.9 146 30.1
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 3.1e-10 70.9 249 30.5
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 4.0e-10 70.5 524 30.9
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 4.0e-10 70.5 524 30.9
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 4.0e-10 70.5 314 26.1
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 5.3e-10 70.1 165 33.9
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 6.9e-10 69.7 165 34.5
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 9.0e-10 69.3 291 25.8
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 1.2e-09 68.9 154 28.6
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 1.5e-09 68.6 308 29.2
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 2.0e-09 68.2 205 29.3
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 2.0e-09 68.2 165 33.9
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 3.4e-09 67.4 202 29.2
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 3.4e-09 67.4 262 29.4
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 4.5e-09 67.0 135 32.6
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 5.8e-09 66.6 320 26.9
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 5.8e-09 66.6 252 27.4
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 1.3e-08 65.5 314 25.5
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 1.3e-08 65.5 502 31.1
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 1.3e-08 65.5 525 33.7
Lj8P558T21 Lonicera japonica HOM05D012621 ORTHO05D004349 2.2e-08 64.7 82 45.1
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 2.2e-08 64.7 182 30.8
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 2.9e-08 64.3 191 30.9
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 2.9e-08 64.3 303 25.7
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.9e-08 64.3 207 29.5
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 3.8e-08 63.9 139 30.2
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 4.9e-08 63.5 317 24.9
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 4.9e-08 63.5 301 26.2
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 6.4e-08 63.2 300 27.0
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 8.4e-08 62.8 133 33.8
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 1.1e-07 62.4 209 28.2
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.1e-07 62.4 301 25.9
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.4e-07 62.0 320 26.9
Lj8P558T23 Lonicera japonica HOM05D012621 ORTHO05D004349 1.9e-07 61.6 83 43.4
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 3.2e-07 60.8 343 27.1
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 3.2e-07 60.8 182 30.2
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 5.5e-07 60.1 245 28.2
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 5.5e-07 60.1 322 26.4
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 7.1e-07 59.7 198 28.3
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 7.1e-07 59.7 306 24.8
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 9.3e-07 59.3 559 26.7
Lj8P558T18 Lonicera japonica HOM05D012621 ORTHO05D004349 9.3e-07 59.3 83 41.0
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 9.3e-07 59.3 202 25.2
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 9.3e-07 59.3 324 26.2
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 1.6e-06 58.5 288 26.0
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.6e-06 58.5 305 25.9
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 2.1e-06 58.2 234 26.5
Lj8A559T40 Lonicera japonica HOM05D012621 ORTHO05D004349 2.1e-06 58.2 84 41.7
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 2.7e-06 57.8 228 27.2
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.7e-06 57.8 111 34.2
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 2.7e-06 57.8 206 28.2
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 3.5e-06 57.4 253 25.3
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 4.6e-06 57.0 186 29.0
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 4.6e-06 57.0 215 25.6
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 6.0e-06 56.6 159 29.6
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 6.0e-06 56.6 178 28.1
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 6.0e-06 56.6 127 31.5
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 6.0e-06 56.6 176 30.7
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 7.9e-06 56.2 178 28.1


User provided reference genes

Program Settings