Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 3.6e-110 401.7 224 100.0
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 2.0e-60 236.5 237 61.2
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.4e-60 235.7 225 62.7
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 4.4e-60 235.3 230 60.4
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 2.2e-59 233.0 227 63.0
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 2.9e-59 232.6 231 59.7
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 3.7e-59 232.3 232 61.6
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 8.4e-59 231.1 237 59.9
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 2.4e-58 229.6 238 60.1
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 4.1e-58 228.8 225 60.9
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 4.1e-58 228.8 232 59.5
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 7.1e-58 228.0 237 60.3
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 1.6e-57 226.9 242 59.1
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 2.7e-57 226.1 225 61.8
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.6e-57 225.3 233 60.9
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 7.8e-57 224.6 225 60.0
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 1.3e-56 223.8 225 59.1
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 3.9e-56 222.2 238 58.8
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 6.6e-56 221.5 215 61.4
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 1.1e-55 220.7 242 57.4
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 2.5e-55 219.5 232 57.8
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 5.6e-55 218.4 225 60.0
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 7.3e-55 218.0 227 62.6
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 7.3e-55 218.0 232 58.6
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 7.3e-55 218.0 224 58.5
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 9.6e-55 217.6 226 59.3
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 1.2e-54 217.2 226 57.5
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 1.2e-54 217.2 238 56.3
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.6e-54 216.9 225 59.6
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.6e-54 216.9 204 62.7
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 1.6e-54 216.9 234 56.8
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 1.6e-54 216.9 223 58.3
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.1e-54 216.5 236 55.9
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 2.1e-54 216.5 230 56.1
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.1e-54 216.5 240 58.3
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 3.6e-54 215.7 237 55.7
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 3.6e-54 215.7 234 56.4
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 6.2e-54 214.9 238 55.5
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 8.1e-54 214.5 224 57.1
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.1e-53 214.2 233 56.7
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 1.8e-53 213.4 235 56.2
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 1.8e-53 213.4 238 56.3
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 3.1e-53 212.6 238 57.1
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 8.9e-53 211.1 231 56.7
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 8.9e-53 211.1 239 54.8
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 8.9e-53 211.1 233 56.7
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 8.9e-53 211.1 233 58.8
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 8.9e-53 211.1 238 55.0
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.2e-52 210.7 224 57.1
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 2.0e-52 209.9 233 58.4
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 2.6e-52 209.5 227 55.1
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 2.6e-52 209.5 224 58.0
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 3.4e-52 209.1 238 55.0
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 9.9e-52 207.6 240 53.8
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 9.9e-52 207.6 231 55.8
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 1.3e-51 207.2 230 56.5
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.3e-51 207.2 232 56.5
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.7e-51 206.8 217 58.1
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.8e-51 205.7 235 54.9
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 1.4e-50 203.8 235 55.3
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.9e-50 203.4 248 55.2
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 1.2e-49 200.7 231 55.4
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 1.2e-49 200.7 255 52.2
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.6e-49 200.3 191 59.7
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.6e-49 200.3 222 55.9
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.6e-49 200.3 221 56.6
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.7e-49 199.5 222 56.3
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 3.5e-49 199.1 240 53.3
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 3.5e-49 199.1 222 55.9
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 3.5e-49 199.1 229 57.6
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 1.3e-48 197.2 235 53.6
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.7e-48 196.8 209 56.9
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.3e-48 196.4 173 63.6
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 3.0e-48 196.1 216 56.0
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.0e-48 196.1 232 53.9
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 1.5e-47 193.7 209 56.0
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.3e-47 192.6 236 52.1
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 4.3e-47 192.2 218 53.7
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 5.6e-47 191.8 176 60.8
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 7.3e-47 191.4 175 61.1
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 9.6e-47 191.0 215 54.4
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.3e-46 190.7 218 54.6
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.6e-46 190.3 262 48.9
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 2.1e-46 189.9 220 54.5
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 2.1e-46 189.9 179 64.2
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 2.8e-46 189.5 221 53.4
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 1.1e-45 187.6 195 58.5
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 1.1e-45 187.6 238 51.7
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.8e-45 186.8 214 54.7
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 1.8e-45 186.8 218 53.7
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 3.1e-45 186.0 214 54.7
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 4.0e-45 185.7 176 60.2
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 4.0e-45 185.7 225 52.0
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 4.0e-45 185.7 253 49.0
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 6.9e-45 184.9 222 52.7
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 3.4e-44 182.6 171 60.8
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.3e-43 180.6 179 59.2
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 2.2e-43 179.9 222 52.7
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 6.4e-43 178.3 225 50.7
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.4e-42 176.4 215 53.0
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 4.2e-42 175.6 203 56.2
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 5.4e-42 175.3 173 60.1
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 9.3e-42 174.5 223 52.0
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 1.2e-41 174.1 149 64.4
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 2.7e-41 172.9 177 61.0
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 7.9e-41 171.4 145 64.1
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.0e-40 171.0 216 51.9
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 6.2e-38 161.8 134 65.7
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.2e-35 153.3 167 57.5
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 3.9e-32 142.5 198 48.0
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 1.5e-31 140.6 197 52.3
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 2.5e-31 139.8 167 52.1
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.8e-29 133.7 177 48.0
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 4.9e-27 125.6 140 54.3
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 6.5e-27 125.2 222 42.3
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.1e-26 124.4 175 45.1
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.2e-25 120.9 128 55.5
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 2.7e-25 119.8 128 54.7
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.1e-22 110.2 228 39.5
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 8.5e-19 98.2 104 49.0
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.0e-16 91.3 75 64.0
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.1e-15 87.8 190 36.8
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 4.3e-15 85.9 106 47.2
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 7.7e-12 75.1 113 47.8
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.7e-09 66.6 81 51.9


User provided reference genes

Program Settings